Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1K8A:A1041:A1005
Extra
PDB:
ATOM 1 O3' A A1040 37.969 101.651 101.943 1.00 38.79 O
ATOM 2 P A A1041 37.827 101.323 103.498 1.00 38.80 P
ATOM 3 OP1 A A1041 36.430 101.639 103.830 1.00 37.75 O
ATOM 4 OP2 A A1041 38.918 101.947 104.261 1.00 39.55 O
ATOM 5 O5' A A1041 38.024 99.750 103.567 1.00 37.43 O
ATOM 6 C5' A A1041 37.190 98.881 102.810 1.00 36.10 C
ATOM 7 C4' A A1041 38.023 97.841 102.142 1.00 37.11 C
ATOM 8 O4' A A1041 38.961 98.499 101.264 1.00 37.97 O
ATOM 9 C3' A A1041 38.904 97.038 103.074 1.00 37.61 C
ATOM 10 O3' A A1041 38.129 95.988 103.626 1.00 38.88 O
ATOM 11 C2' A A1041 39.975 96.528 102.122 1.00 37.46 C
ATOM 12 O2' A A1041 39.504 95.439 101.374 1.00 37.59 O
ATOM 13 C1' A A1041 40.144 97.726 101.184 1.00 38.58 C
ATOM 14 N9 A A1041 41.268 98.566 101.571 1.00 39.87 N
ATOM 15 C8 A A1041 41.373 99.360 102.682 1.00 41.04 C
ATOM 16 N7 A A1041 42.537 99.934 102.811 1.00 42.28 N
ATOM 17 C5 A A1041 43.240 99.509 101.699 1.00 41.30 C
ATOM 18 C6 A A1041 44.540 99.761 101.272 1.00 40.15 C
ATOM 19 N6 A A1041 45.392 100.531 101.940 1.00 37.94 N
ATOM 20 N1 A A1041 44.946 99.187 100.120 1.00 41.67 N
ATOM 21 C2 A A1041 44.078 98.410 99.451 1.00 41.71 C
ATOM 22 N3 A A1041 42.823 98.097 99.756 1.00 40.63 N
ATOM 23 C4 A A1041 42.462 98.684 100.911 1.00 41.01 C
ATOM 24 P C A1042 38.798 94.918 104.621 1.00 41.37 P
ATOM 25 OP1 C A1042 40.261 94.940 104.476 1.00 42.29 O
ATOM 26 OP2 C A1042 38.075 93.637 104.459 1.00 40.47 O
ATOM 27 O5' C A1042 38.469 95.463 106.080 1.00 41.73 O
TER
ATOM 1 O3' G B1004 52.489 96.228 94.571 1.00 38.22 O
ATOM 2 P G B1005 52.396 95.569 96.047 1.00 38.70 P
ATOM 3 OP1 G B1005 53.547 96.089 96.831 1.00 38.31 O
ATOM 4 OP2 G B1005 52.212 94.097 95.905 1.00 39.87 O
ATOM 5 O5' G B1005 51.067 96.183 96.682 1.00 35.92 O
ATOM 6 C5' G B1005 51.065 97.545 97.163 1.00 35.14 C
ATOM 7 C4' G B1005 49.729 97.933 97.763 1.00 34.40 C
ATOM 8 O4' G B1005 48.689 97.892 96.753 1.00 35.22 O
ATOM 9 C3' G B1005 49.169 97.121 98.920 1.00 33.34 C
ATOM 10 O3' G B1005 49.828 97.471 100.142 1.00 33.62 O
ATOM 11 C2' G B1005 47.696 97.532 98.862 1.00 33.14 C
ATOM 12 O2' G B1005 47.457 98.865 99.260 1.00 32.31 O
ATOM 13 C1' G B1005 47.456 97.517 97.353 1.00 33.83 C
ATOM 14 N9 G B1005 47.139 96.164 96.913 1.00 32.24 N
ATOM 15 C8 G B1005 47.983 95.282 96.287 1.00 31.07 C
ATOM 16 N7 G B1005 47.440 94.120 96.077 1.00 29.95 N
ATOM 17 C5 G B1005 46.161 94.240 96.591 1.00 30.42 C
ATOM 18 C6 G B1005 45.120 93.287 96.684 1.00 30.04 C
ATOM 19 O6 G B1005 45.126 92.104 96.324 1.00 30.62 O
ATOM 20 N1 G B1005 43.985 93.825 97.280 1.00 29.92 N
ATOM 21 C2 G B1005 43.867 95.114 97.734 1.00 31.02 C
ATOM 22 N2 G B1005 42.690 95.443 98.286 1.00 29.71 N
ATOM 23 N3 G B1005 44.836 96.014 97.655 1.00 31.81 N
ATOM 24 C4 G B1005 45.950 95.507 97.084 1.00 31.17 C
ATOM 25 P U B1006 50.026 96.373 101.312 1.00 33.51 P
ATOM 26 OP1 U B1006 50.911 96.984 102.333 1.00 31.72 O
ATOM 27 OP2 U B1006 50.371 95.039 100.762 1.00 35.61 O
ATOM 28 O5' U B1006 48.573 96.238 101.946 1.00 32.94 O
TER
ATOM 2 P A A1041 37.827 101.323 103.498 1.00 38.80 P
ATOM 3 OP1 A A1041 36.430 101.639 103.830 1.00 37.75 O
ATOM 4 OP2 A A1041 38.918 101.947 104.261 1.00 39.55 O
ATOM 5 O5' A A1041 38.024 99.750 103.567 1.00 37.43 O
ATOM 6 C5' A A1041 37.190 98.881 102.810 1.00 36.10 C
ATOM 7 C4' A A1041 38.023 97.841 102.142 1.00 37.11 C
ATOM 8 O4' A A1041 38.961 98.499 101.264 1.00 37.97 O
ATOM 9 C3' A A1041 38.904 97.038 103.074 1.00 37.61 C
ATOM 10 O3' A A1041 38.129 95.988 103.626 1.00 38.88 O
ATOM 11 C2' A A1041 39.975 96.528 102.122 1.00 37.46 C
ATOM 12 O2' A A1041 39.504 95.439 101.374 1.00 37.59 O
ATOM 13 C1' A A1041 40.144 97.726 101.184 1.00 38.58 C
ATOM 14 N9 A A1041 41.268 98.566 101.571 1.00 39.87 N
ATOM 15 C8 A A1041 41.373 99.360 102.682 1.00 41.04 C
ATOM 16 N7 A A1041 42.537 99.934 102.811 1.00 42.28 N
ATOM 17 C5 A A1041 43.240 99.509 101.699 1.00 41.30 C
ATOM 18 C6 A A1041 44.540 99.761 101.272 1.00 40.15 C
ATOM 19 N6 A A1041 45.392 100.531 101.940 1.00 37.94 N
ATOM 20 N1 A A1041 44.946 99.187 100.120 1.00 41.67 N
ATOM 21 C2 A A1041 44.078 98.410 99.451 1.00 41.71 C
ATOM 22 N3 A A1041 42.823 98.097 99.756 1.00 40.63 N
ATOM 23 C4 A A1041 42.462 98.684 100.911 1.00 41.01 C
ATOM 24 P C A1042 38.798 94.918 104.621 1.00 41.37 P
ATOM 25 OP1 C A1042 40.261 94.940 104.476 1.00 42.29 O
ATOM 26 OP2 C A1042 38.075 93.637 104.459 1.00 40.47 O
ATOM 27 O5' C A1042 38.469 95.463 106.080 1.00 41.73 O
TER
ATOM 1 O3' G B1004 52.489 96.228 94.571 1.00 38.22 O
ATOM 2 P G B1005 52.396 95.569 96.047 1.00 38.70 P
ATOM 3 OP1 G B1005 53.547 96.089 96.831 1.00 38.31 O
ATOM 4 OP2 G B1005 52.212 94.097 95.905 1.00 39.87 O
ATOM 5 O5' G B1005 51.067 96.183 96.682 1.00 35.92 O
ATOM 6 C5' G B1005 51.065 97.545 97.163 1.00 35.14 C
ATOM 7 C4' G B1005 49.729 97.933 97.763 1.00 34.40 C
ATOM 8 O4' G B1005 48.689 97.892 96.753 1.00 35.22 O
ATOM 9 C3' G B1005 49.169 97.121 98.920 1.00 33.34 C
ATOM 10 O3' G B1005 49.828 97.471 100.142 1.00 33.62 O
ATOM 11 C2' G B1005 47.696 97.532 98.862 1.00 33.14 C
ATOM 12 O2' G B1005 47.457 98.865 99.260 1.00 32.31 O
ATOM 13 C1' G B1005 47.456 97.517 97.353 1.00 33.83 C
ATOM 14 N9 G B1005 47.139 96.164 96.913 1.00 32.24 N
ATOM 15 C8 G B1005 47.983 95.282 96.287 1.00 31.07 C
ATOM 16 N7 G B1005 47.440 94.120 96.077 1.00 29.95 N
ATOM 17 C5 G B1005 46.161 94.240 96.591 1.00 30.42 C
ATOM 18 C6 G B1005 45.120 93.287 96.684 1.00 30.04 C
ATOM 19 O6 G B1005 45.126 92.104 96.324 1.00 30.62 O
ATOM 20 N1 G B1005 43.985 93.825 97.280 1.00 29.92 N
ATOM 21 C2 G B1005 43.867 95.114 97.734 1.00 31.02 C
ATOM 22 N2 G B1005 42.690 95.443 98.286 1.00 29.71 N
ATOM 23 N3 G B1005 44.836 96.014 97.655 1.00 31.81 N
ATOM 24 C4 G B1005 45.950 95.507 97.084 1.00 31.17 C
ATOM 25 P U B1006 50.026 96.373 101.312 1.00 33.51 P
ATOM 26 OP1 U B1006 50.911 96.984 102.333 1.00 31.72 O
ATOM 27 OP2 U B1006 50.371 95.039 100.762 1.00 35.61 O
ATOM 28 O5' U B1006 48.573 96.238 101.946 1.00 32.94 O
TER
Atoms:
OP1: (36.430,101.639,103.830)
OP2: (38.918,101.947,104.261)
C3': (38.904,97.038,103.074)
C1': (40.144,97.726,101.184)
C5': (37.190,98.881,102.810)
O4': (38.961,98.499,101.264)
C8: (41.373,99.360,102.682)
O2': (39.504,95.439,101.374)
C6: (44.540,99.761,101.272)
C5: (43.240,99.509,101.699)
C4: (42.462,98.684,100.911)
P: (37.827,101.323,103.498)
C4': (38.023,97.841,102.142)
C2': (39.975,96.528,102.122)
C2: (44.078,98.410,99.451)
N1: (44.946,99.187,100.120)
N3: (42.823,98.097,99.756)
N6: (45.392,100.531,101.940)
N7: (42.537,99.934,102.811)
N9: (41.268,98.566,101.571)
O5': (38.024,99.750,103.567)
O3': (38.129,95.988,103.626)
OP2: (38.918,101.947,104.261)
C3': (38.904,97.038,103.074)
C1': (40.144,97.726,101.184)
C5': (37.190,98.881,102.810)
O4': (38.961,98.499,101.264)
C8: (41.373,99.360,102.682)
O2': (39.504,95.439,101.374)
C6: (44.540,99.761,101.272)
C5: (43.240,99.509,101.699)
C4: (42.462,98.684,100.911)
P: (37.827,101.323,103.498)
C4': (38.023,97.841,102.142)
C2': (39.975,96.528,102.122)
C2: (44.078,98.410,99.451)
N1: (44.946,99.187,100.120)
N3: (42.823,98.097,99.756)
N6: (45.392,100.531,101.940)
N7: (42.537,99.934,102.811)
N9: (41.268,98.566,101.571)
O5': (38.024,99.750,103.567)
O3': (38.129,95.988,103.626)
OP1: (53.547,96.089,96.831)
OP2: (52.212,94.097,95.905)
C3': (49.169,97.121,98.920)
C1': (47.456,97.517,97.353)
C5': (51.065,97.545,97.163)
O6: (45.126,92.104,96.324)
O4': (48.689,97.892,96.753)
C8: (47.983,95.282,96.287)
C2: (43.867,95.114,97.734)
C6: (45.120,93.287,96.684)
C5: (46.161,94.240,96.591)
C4: (45.950,95.507,97.084)
P: (52.396,95.569,96.047)
C4': (49.729,97.933,97.763)
C2': (47.696,97.532,98.862)
O2': (47.457,98.865,99.260)
N1: (43.985,93.825,97.280)
N2: (42.690,95.443,98.286)
N3: (44.836,96.014,97.655)
N7: (47.440,94.120,96.077)
N9: (47.139,96.164,96.913)
O5': (51.067,96.183,96.682)
O3': (49.828,97.471,100.142)
OP2: (52.212,94.097,95.905)
C3': (49.169,97.121,98.920)
C1': (47.456,97.517,97.353)
C5': (51.065,97.545,97.163)
O6: (45.126,92.104,96.324)
O4': (48.689,97.892,96.753)
C8: (47.983,95.282,96.287)
C2: (43.867,95.114,97.734)
C6: (45.120,93.287,96.684)
C5: (46.161,94.240,96.591)
C4: (45.950,95.507,97.084)
P: (52.396,95.569,96.047)
C4': (49.729,97.933,97.763)
C2': (47.696,97.532,98.862)
O2': (47.457,98.865,99.260)
N1: (43.985,93.825,97.280)
N2: (42.690,95.443,98.286)
N3: (44.836,96.014,97.655)
N7: (47.440,94.120,96.077)
N9: (47.139,96.164,96.913)
O5': (51.067,96.183,96.682)
O3': (49.828,97.471,100.142)
Image (generated by PyMOL):