Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2GDI:Y61:Y11
Extra
PDB:
ATOM 1 O3' A A 60 1.717 17.447 48.253 1.00 30.22 O
ATOM 2 P U A 61 1.842 17.808 49.805 1.00 31.15 P
ATOM 3 OP1 U A 61 0.607 17.331 50.466 1.00 31.19 O
ATOM 4 OP2 U A 61 2.238 19.229 49.923 1.00 31.29 O
ATOM 5 O5' U A 61 3.079 16.912 50.285 1.00 30.53 O
ATOM 6 C5' U A 61 3.047 15.501 50.106 1.00 30.12 C
ATOM 7 C4' U A 61 4.440 14.895 50.165 1.00 30.38 C
ATOM 8 O4' U A 61 5.249 15.360 49.054 1.00 29.06 O
ATOM 9 C3' U A 61 5.265 15.243 51.395 1.00 30.73 C
ATOM 10 O3' U A 61 4.875 14.428 52.498 1.00 33.04 O
ATOM 11 C2' U A 61 6.663 14.894 50.893 1.00 29.78 C
ATOM 12 O2' U A 61 6.913 13.502 50.933 1.00 29.36 O
ATOM 13 C1' U A 61 6.610 15.376 49.442 1.00 28.58 C
ATOM 14 N1 U A 61 7.150 16.759 49.270 1.00 27.92 N
ATOM 15 C2 U A 61 8.474 16.932 48.909 1.00 27.52 C
ATOM 16 O2 U A 61 9.241 16.007 48.702 1.00 26.13 O
ATOM 17 N3 U A 61 8.873 18.243 48.793 1.00 26.96 N
ATOM 18 C4 U A 61 8.098 19.369 48.999 1.00 26.74 C
ATOM 19 O4 U A 61 8.594 20.481 48.856 1.00 27.37 O
ATOM 20 C5 U A 61 6.733 19.108 49.375 1.00 27.12 C
ATOM 21 C6 U A 61 6.321 17.842 49.496 1.00 27.30 C
ATOM 22 P G A 62 5.040 14.960 53.999 1.00 35.32 P
ATOM 23 OP1 G A 62 4.569 13.886 54.901 1.00 36.12 O
ATOM 24 OP2 G A 62 4.434 16.304 54.080 1.00 35.22 O
ATOM 25 O5' G A 62 6.624 15.124 54.168 1.00 37.88 O
TER
ATOM 1 O3' U B 10 12.326 6.030 48.020 1.00 34.63 O
ATOM 2 P G B 11 11.066 5.142 47.600 1.00 35.46 P
ATOM 3 OP1 G B 11 10.949 4.018 48.558 1.00 34.93 O
ATOM 4 OP2 G B 11 11.159 4.875 46.146 1.00 35.33 O
ATOM 5 O5' G B 11 9.848 6.157 47.819 1.00 34.79 O
ATOM 6 C5' G B 11 9.411 6.466 49.131 1.00 33.43 C
ATOM 7 C4' G B 11 9.281 7.966 49.323 1.00 32.33 C
ATOM 8 O4' G B 11 10.589 8.587 49.350 1.00 31.89 O
ATOM 9 C3' G B 11 8.572 8.735 48.222 1.00 32.24 C
ATOM 10 O3' G B 11 7.164 8.566 48.314 1.00 32.86 O
ATOM 11 C2' G B 11 8.976 10.148 48.616 1.00 31.72 C
ATOM 12 O2' G B 11 8.271 10.590 49.759 1.00 31.94 O
ATOM 13 C1' G B 11 10.446 9.943 48.968 1.00 30.26 C
ATOM 14 N9 G B 11 11.362 10.239 47.870 1.00 29.04 N
ATOM 15 C8 G B 11 12.087 9.343 47.119 1.00 28.38 C
ATOM 16 N7 G B 11 12.829 9.913 46.209 1.00 28.14 N
ATOM 17 C5 G B 11 12.580 11.272 46.365 1.00 27.70 C
ATOM 18 C6 G B 11 13.096 12.388 45.661 1.00 27.63 C
ATOM 19 O6 G B 11 13.907 12.398 44.726 1.00 27.85 O
ATOM 20 N1 G B 11 12.582 13.591 46.144 1.00 26.71 N
ATOM 21 C2 G B 11 11.681 13.702 47.173 1.00 27.10 C
ATOM 22 N2 G B 11 11.296 14.945 47.497 1.00 26.96 N
ATOM 23 N3 G B 11 11.190 12.666 47.841 1.00 27.30 N
ATOM 24 C4 G B 11 11.681 11.488 47.385 1.00 27.87 C
ATOM 25 P C B 12 6.261 8.640 46.997 1.00 32.43 P
ATOM 26 OP1 C B 12 4.902 8.186 47.363 1.00 32.86 O
ATOM 27 OP2 C B 12 7.005 7.976 45.903 1.00 32.59 O
ATOM 28 O5' C B 12 6.211 10.200 46.650 1.00 32.05 O
TER
ATOM 2 P U A 61 1.842 17.808 49.805 1.00 31.15 P
ATOM 3 OP1 U A 61 0.607 17.331 50.466 1.00 31.19 O
ATOM 4 OP2 U A 61 2.238 19.229 49.923 1.00 31.29 O
ATOM 5 O5' U A 61 3.079 16.912 50.285 1.00 30.53 O
ATOM 6 C5' U A 61 3.047 15.501 50.106 1.00 30.12 C
ATOM 7 C4' U A 61 4.440 14.895 50.165 1.00 30.38 C
ATOM 8 O4' U A 61 5.249 15.360 49.054 1.00 29.06 O
ATOM 9 C3' U A 61 5.265 15.243 51.395 1.00 30.73 C
ATOM 10 O3' U A 61 4.875 14.428 52.498 1.00 33.04 O
ATOM 11 C2' U A 61 6.663 14.894 50.893 1.00 29.78 C
ATOM 12 O2' U A 61 6.913 13.502 50.933 1.00 29.36 O
ATOM 13 C1' U A 61 6.610 15.376 49.442 1.00 28.58 C
ATOM 14 N1 U A 61 7.150 16.759 49.270 1.00 27.92 N
ATOM 15 C2 U A 61 8.474 16.932 48.909 1.00 27.52 C
ATOM 16 O2 U A 61 9.241 16.007 48.702 1.00 26.13 O
ATOM 17 N3 U A 61 8.873 18.243 48.793 1.00 26.96 N
ATOM 18 C4 U A 61 8.098 19.369 48.999 1.00 26.74 C
ATOM 19 O4 U A 61 8.594 20.481 48.856 1.00 27.37 O
ATOM 20 C5 U A 61 6.733 19.108 49.375 1.00 27.12 C
ATOM 21 C6 U A 61 6.321 17.842 49.496 1.00 27.30 C
ATOM 22 P G A 62 5.040 14.960 53.999 1.00 35.32 P
ATOM 23 OP1 G A 62 4.569 13.886 54.901 1.00 36.12 O
ATOM 24 OP2 G A 62 4.434 16.304 54.080 1.00 35.22 O
ATOM 25 O5' G A 62 6.624 15.124 54.168 1.00 37.88 O
TER
ATOM 1 O3' U B 10 12.326 6.030 48.020 1.00 34.63 O
ATOM 2 P G B 11 11.066 5.142 47.600 1.00 35.46 P
ATOM 3 OP1 G B 11 10.949 4.018 48.558 1.00 34.93 O
ATOM 4 OP2 G B 11 11.159 4.875 46.146 1.00 35.33 O
ATOM 5 O5' G B 11 9.848 6.157 47.819 1.00 34.79 O
ATOM 6 C5' G B 11 9.411 6.466 49.131 1.00 33.43 C
ATOM 7 C4' G B 11 9.281 7.966 49.323 1.00 32.33 C
ATOM 8 O4' G B 11 10.589 8.587 49.350 1.00 31.89 O
ATOM 9 C3' G B 11 8.572 8.735 48.222 1.00 32.24 C
ATOM 10 O3' G B 11 7.164 8.566 48.314 1.00 32.86 O
ATOM 11 C2' G B 11 8.976 10.148 48.616 1.00 31.72 C
ATOM 12 O2' G B 11 8.271 10.590 49.759 1.00 31.94 O
ATOM 13 C1' G B 11 10.446 9.943 48.968 1.00 30.26 C
ATOM 14 N9 G B 11 11.362 10.239 47.870 1.00 29.04 N
ATOM 15 C8 G B 11 12.087 9.343 47.119 1.00 28.38 C
ATOM 16 N7 G B 11 12.829 9.913 46.209 1.00 28.14 N
ATOM 17 C5 G B 11 12.580 11.272 46.365 1.00 27.70 C
ATOM 18 C6 G B 11 13.096 12.388 45.661 1.00 27.63 C
ATOM 19 O6 G B 11 13.907 12.398 44.726 1.00 27.85 O
ATOM 20 N1 G B 11 12.582 13.591 46.144 1.00 26.71 N
ATOM 21 C2 G B 11 11.681 13.702 47.173 1.00 27.10 C
ATOM 22 N2 G B 11 11.296 14.945 47.497 1.00 26.96 N
ATOM 23 N3 G B 11 11.190 12.666 47.841 1.00 27.30 N
ATOM 24 C4 G B 11 11.681 11.488 47.385 1.00 27.87 C
ATOM 25 P C B 12 6.261 8.640 46.997 1.00 32.43 P
ATOM 26 OP1 C B 12 4.902 8.186 47.363 1.00 32.86 O
ATOM 27 OP2 C B 12 7.005 7.976 45.903 1.00 32.59 O
ATOM 28 O5' C B 12 6.211 10.200 46.650 1.00 32.05 O
TER
Atoms:
C4: (8.098,19.369,48.999)
N3: (8.873,18.243,48.793)
OP1: (0.607,17.331,50.466)
OP2: (2.238,19.229,49.923)
C2: (8.474,16.932,48.909)
C1': (6.610,15.376,49.442)
C3': (5.265,15.243,51.395)
O5': (3.079,16.912,50.285)
O4': (5.249,15.360,49.054)
C5': (3.047,15.501,50.106)
P: (1.842,17.808,49.805)
C4': (4.440,14.895,50.165)
C2': (6.663,14.894,50.893)
O2': (6.913,13.502,50.933)
N1: (7.150,16.759,49.270)
O4: (8.594,20.481,48.856)
O2: (9.241,16.007,48.702)
C6: (6.321,17.842,49.496)
C5: (6.733,19.108,49.375)
O3': (4.875,14.428,52.498)
N3: (8.873,18.243,48.793)
OP1: (0.607,17.331,50.466)
OP2: (2.238,19.229,49.923)
C2: (8.474,16.932,48.909)
C1': (6.610,15.376,49.442)
C3': (5.265,15.243,51.395)
O5': (3.079,16.912,50.285)
O4': (5.249,15.360,49.054)
C5': (3.047,15.501,50.106)
P: (1.842,17.808,49.805)
C4': (4.440,14.895,50.165)
C2': (6.663,14.894,50.893)
O2': (6.913,13.502,50.933)
N1: (7.150,16.759,49.270)
O4: (8.594,20.481,48.856)
O2: (9.241,16.007,48.702)
C6: (6.321,17.842,49.496)
C5: (6.733,19.108,49.375)
O3': (4.875,14.428,52.498)
OP1: (10.949,4.018,48.558)
OP2: (11.159,4.875,46.146)
C3': (8.572,8.735,48.222)
C1': (10.446,9.943,48.968)
C5': (9.411,6.466,49.131)
O6: (13.907,12.398,44.726)
O4': (10.589,8.587,49.350)
C8: (12.087,9.343,47.119)
C2: (11.681,13.702,47.173)
C6: (13.096,12.388,45.661)
C5: (12.580,11.272,46.365)
C4: (11.681,11.488,47.385)
P: (11.066,5.142,47.600)
C4': (9.281,7.966,49.323)
C2': (8.976,10.148,48.616)
O2': (8.271,10.590,49.759)
N1: (12.582,13.591,46.144)
N2: (11.296,14.945,47.497)
N3: (11.190,12.666,47.841)
N7: (12.829,9.913,46.209)
N9: (11.362,10.239,47.870)
O5': (9.848,6.157,47.819)
O3': (7.164,8.566,48.314)
OP2: (11.159,4.875,46.146)
C3': (8.572,8.735,48.222)
C1': (10.446,9.943,48.968)
C5': (9.411,6.466,49.131)
O6: (13.907,12.398,44.726)
O4': (10.589,8.587,49.350)
C8: (12.087,9.343,47.119)
C2: (11.681,13.702,47.173)
C6: (13.096,12.388,45.661)
C5: (12.580,11.272,46.365)
C4: (11.681,11.488,47.385)
P: (11.066,5.142,47.600)
C4': (9.281,7.966,49.323)
C2': (8.976,10.148,48.616)
O2': (8.271,10.590,49.759)
N1: (12.582,13.591,46.144)
N2: (11.296,14.945,47.497)
N3: (11.190,12.666,47.841)
N7: (12.829,9.913,46.209)
N9: (11.362,10.239,47.870)
O5': (9.848,6.157,47.819)
O3': (7.164,8.566,48.314)
Image (generated by PyMOL):