ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YHQ:01038:02014

Extra

PDB:
ATOM 1 O3' A A1037 31.403 108.740 111.356 1.00 31.33 O
ATOM 2 P A A1038 31.838 107.798 110.130 1.00 32.84 P
ATOM 3 OP1 A A1038 30.624 107.622 109.296 1.00 32.91 O
ATOM 4 OP2 A A1038 32.561 106.605 110.641 1.00 29.32 O
ATOM 5 O5' A A1038 32.899 108.671 109.320 1.00 31.90 O
ATOM 6 C5' A A1038 32.575 109.992 108.843 1.00 31.13 C
ATOM 7 C4' A A1038 33.841 110.796 108.647 1.00 33.88 C
ATOM 8 O4' A A1038 34.511 110.939 109.923 1.00 33.77 O
ATOM 9 C3' A A1038 34.883 110.149 107.742 1.00 33.66 C
ATOM 10 O3' A A1038 34.624 110.537 106.397 1.00 34.39 O
ATOM 11 C2' A A1038 36.197 110.765 108.225 1.00 33.44 C
ATOM 12 O2' A A1038 36.490 111.996 107.602 1.00 34.02 O
ATOM 13 C1' A A1038 35.905 111.024 109.709 1.00 33.02 C
ATOM 14 N9 A A1038 36.573 110.167 110.681 1.00 31.64 N
ATOM 15 C8 A A1038 36.540 108.798 110.800 1.00 31.50 C
ATOM 16 N7 A A1038 37.242 108.341 111.809 1.00 31.61 N
ATOM 17 C5 A A1038 37.778 109.487 112.387 1.00 29.16 C
ATOM 18 C6 A A1038 38.610 109.684 113.494 1.00 26.62 C
ATOM 19 N6 A A1038 39.082 108.693 114.252 1.00 27.53 N
ATOM 20 N1 A A1038 38.948 110.950 113.805 1.00 26.94 N
ATOM 21 C2 A A1038 38.481 111.945 113.050 1.00 28.14 C
ATOM 22 N3 A A1038 37.695 111.889 111.985 1.00 30.53 N
ATOM 23 C4 A A1038 37.375 110.615 111.701 1.00 29.52 C
ATOM 24 P C A1039 34.281 109.436 105.286 1.00 35.11 P
ATOM 25 OP1 C A1039 34.118 110.191 104.024 1.00 31.33 O
ATOM 26 OP2 C A1039 33.186 108.541 105.762 1.00 36.00 O
ATOM 27 O5' C A1039 35.583 108.534 105.225 1.00 34.96 O
TER

ATOM 1 O3' A B2013 45.427 115.932 118.431 1.00 30.45 O
ATOM 2 P G B2014 46.270 115.081 117.364 1.00 33.23 P
ATOM 3 OP1 G B2014 47.163 114.175 118.134 1.00 32.77 O
ATOM 4 OP2 G B2014 46.854 116.014 116.365 1.00 32.39 O
ATOM 5 O5' G B2014 45.171 114.200 116.617 1.00 34.55 O
ATOM 6 C5' G B2014 44.359 113.256 117.342 1.00 31.07 C
ATOM 7 C4' G B2014 43.125 112.880 116.546 1.00 29.93 C
ATOM 8 O4' G B2014 42.339 114.068 116.241 1.00 29.91 O
ATOM 9 C3' G B2014 43.321 112.243 115.178 1.00 28.44 C
ATOM 10 O3' G B2014 43.655 110.865 115.267 1.00 29.84 O
ATOM 11 C2' G B2014 41.945 112.436 114.572 1.00 29.35 C
ATOM 12 O2' G B2014 41.000 111.564 115.160 1.00 29.33 O
ATOM 13 C1' G B2014 41.625 113.859 115.029 1.00 30.00 C
ATOM 14 N9 G B2014 42.055 114.851 114.045 1.00 30.23 N
ATOM 15 C8 G B2014 43.106 115.732 114.148 1.00 29.23 C
ATOM 16 N7 G B2014 43.239 116.496 113.100 1.00 28.75 N
ATOM 17 C5 G B2014 42.217 116.094 112.247 1.00 29.90 C
ATOM 18 C6 G B2014 41.852 116.566 110.946 1.00 28.04 C
ATOM 19 O6 G B2014 42.381 117.456 110.270 1.00 28.26 O
ATOM 20 N1 G B2014 40.751 115.885 110.446 1.00 27.02 N
ATOM 21 C2 G B2014 40.080 114.879 111.102 1.00 30.76 C
ATOM 22 N2 G B2014 39.032 114.342 110.456 1.00 28.45 N
ATOM 23 N3 G B2014 40.410 114.430 112.307 1.00 31.58 N
ATOM 24 C4 G B2014 41.478 115.080 112.816 1.00 29.41 C
ATOM 25 P U B2015 44.644 110.211 114.178 1.00 29.35 P
ATOM 26 OP1 U B2015 45.006 108.862 114.671 1.00 30.22 O
ATOM 27 OP2 U B2015 45.725 111.178 113.836 1.00 29.62 O
ATOM 28 O5' U B2015 43.739 110.067 112.874 1.00 30.85 O
TER

Atoms:
OP1: (30.624,107.622,109.296)
OP2: (32.561,106.605,110.641)
C3': (34.883,110.149,107.742)
C1': (35.905,111.024,109.709)
C5': (32.575,109.992,108.843)
O4': (34.511,110.939,109.923)
C8: (36.540,108.798,110.800)
O2': (36.490,111.996,107.602)
C6: (38.610,109.684,113.494)
C5: (37.778,109.487,112.387)
C4: (37.375,110.615,111.701)
P: (31.838,107.798,110.130)
C4': (33.841,110.796,108.647)
C2': (36.197,110.765,108.225)
C2: (38.481,111.945,113.050)
N1: (38.948,110.950,113.805)
N3: (37.695,111.889,111.985)
N6: (39.082,108.693,114.252)
N7: (37.242,108.341,111.809)
N9: (36.573,110.167,110.681)
O5': (32.899,108.671,109.320)
O3': (34.624,110.537,106.397)
OP1: (47.163,114.175,118.134)
OP2: (46.854,116.014,116.365)
C3': (43.321,112.243,115.178)
C1': (41.625,113.859,115.029)
C5': (44.359,113.256,117.342)
O6: (42.381,117.456,110.270)
O4': (42.339,114.068,116.241)
C8: (43.106,115.732,114.148)
C2: (40.080,114.879,111.102)
C6: (41.852,116.566,110.946)
C5: (42.217,116.094,112.247)
C4: (41.478,115.080,112.816)
P: (46.270,115.081,117.364)
C4': (43.125,112.880,116.546)
C2': (41.945,112.436,114.572)
O2': (41.000,111.564,115.160)
N1: (40.751,115.885,110.446)
N2: (39.032,114.342,110.456)
N3: (40.410,114.430,112.307)
N7: (43.239,116.496,113.100)
N9: (42.055,114.851,114.045)
O5': (45.171,114.200,116.617)
O3': (43.655,110.865,115.267)
Image (generated by PyMOL):
PyMOL image
show in jmol