Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1452:A1408
Extra
PDB:
ATOM 1 O3' A A1451 99.576 177.204 50.110 1.00 52.60 O
ATOM 2 P A A1452 98.908 177.410 51.537 1.00 52.39 P
ATOM 3 OP1 A A1452 100.059 177.691 52.419 1.00 51.14 O
ATOM 4 OP2 A A1452 98.000 176.265 51.848 1.00 53.13 O
ATOM 5 O5' A A1452 97.997 178.710 51.338 1.00 54.07 O
ATOM 6 C5' A A1452 98.552 179.934 50.781 1.00 55.71 C
ATOM 7 C4' A A1452 97.475 180.790 50.140 1.00 55.92 C
ATOM 8 O4' A A1452 96.964 180.147 48.953 1.00 56.56 O
ATOM 9 C3' A A1452 96.244 181.027 50.982 1.00 57.19 C
ATOM 10 O3' A A1452 96.477 182.076 51.897 1.00 59.52 O
ATOM 11 C2' A A1452 95.189 181.382 49.947 1.00 56.87 C
ATOM 12 O2' A A1452 95.250 182.722 49.508 1.00 57.16 O
ATOM 13 C1' A A1452 95.587 180.462 48.798 1.00 58.67 C
ATOM 14 N9 A A1452 94.829 179.209 48.742 1.00 61.94 N
ATOM 15 C8 A A1452 94.848 178.160 49.634 1.00 62.70 C
ATOM 16 N7 A A1452 94.096 177.147 49.273 1.00 63.08 N
ATOM 17 C5 A A1452 93.533 177.558 48.072 1.00 63.06 C
ATOM 18 C6 A A1452 92.652 176.929 47.178 1.00 63.15 C
ATOM 19 N6 A A1452 92.177 175.692 47.340 1.00 63.08 N
ATOM 20 N1 A A1452 92.274 177.617 46.080 1.00 63.90 N
ATOM 21 C2 A A1452 92.761 178.848 45.892 1.00 63.99 C
ATOM 22 N3 A A1452 93.603 179.542 46.649 1.00 63.98 N
ATOM 23 C4 A A1452 93.959 178.832 47.740 1.00 63.24 C
ATOM 24 P A A1453 96.097 181.874 53.443 1.00 62.60 P
ATOM 25 OP1 A A1453 96.321 183.182 54.126 1.00 61.75 O
ATOM 26 OP2 A A1453 96.733 180.645 53.992 1.00 64.06 O
ATOM 27 O5' A A1453 94.536 181.568 53.376 1.00 61.09 O
TER
ATOM 1 O3' A B1407 83.914 180.225 46.832 1.00 46.95 O
ATOM 2 P G B1408 84.365 181.159 45.623 1.00 47.08 P
ATOM 3 OP1 G B1408 84.695 182.453 46.260 1.00 47.06 O
ATOM 4 OP2 G B1408 83.332 181.115 44.555 1.00 47.06 O
ATOM 5 O5' G B1408 85.695 180.455 45.110 1.00 45.57 O
ATOM 6 C5' G B1408 85.704 179.073 44.735 1.00 47.97 C
ATOM 7 C4' G B1408 87.119 178.613 44.512 1.00 50.29 C
ATOM 8 O4' G B1408 87.694 179.389 43.432 1.00 51.37 O
ATOM 9 C3' G B1408 88.062 178.808 45.689 1.00 51.04 C
ATOM 10 O3' G B1408 88.053 177.673 46.544 1.00 52.08 O
ATOM 11 C2' G B1408 89.402 178.914 44.992 1.00 51.78 C
ATOM 12 O2' G B1408 89.782 177.618 44.587 1.00 50.63 O
ATOM 13 C1' G B1408 89.029 179.726 43.748 1.00 52.66 C
ATOM 14 N9 G B1408 89.098 181.187 43.852 1.00 54.92 N
ATOM 15 C8 G B1408 88.160 182.071 43.370 1.00 56.09 C
ATOM 16 N7 G B1408 88.507 183.318 43.503 1.00 57.12 N
ATOM 17 C5 G B1408 89.740 183.265 44.129 1.00 57.13 C
ATOM 18 C6 G B1408 90.612 184.311 44.501 1.00 57.99 C
ATOM 19 O6 G B1408 90.470 185.532 44.336 1.00 58.83 O
ATOM 20 N1 G B1408 91.753 183.820 45.116 1.00 59.52 N
ATOM 21 C2 G B1408 92.022 182.488 45.341 1.00 59.15 C
ATOM 22 N2 G B1408 93.192 182.214 45.963 1.00 58.96 N
ATOM 23 N3 G B1408 91.217 181.501 44.987 1.00 57.30 N
ATOM 24 C4 G B1408 90.106 181.957 44.385 1.00 55.86 C
ATOM 25 P C B1409 87.353 177.768 47.978 1.00 52.77 P
ATOM 26 OP1 C B1409 87.147 176.362 48.425 1.00 53.37 O
ATOM 27 OP2 C B1409 86.192 178.666 47.813 1.00 53.16 O
ATOM 28 O5' C B1409 88.436 178.481 48.900 1.00 54.37 O
TER
ATOM 2 P A A1452 98.908 177.410 51.537 1.00 52.39 P
ATOM 3 OP1 A A1452 100.059 177.691 52.419 1.00 51.14 O
ATOM 4 OP2 A A1452 98.000 176.265 51.848 1.00 53.13 O
ATOM 5 O5' A A1452 97.997 178.710 51.338 1.00 54.07 O
ATOM 6 C5' A A1452 98.552 179.934 50.781 1.00 55.71 C
ATOM 7 C4' A A1452 97.475 180.790 50.140 1.00 55.92 C
ATOM 8 O4' A A1452 96.964 180.147 48.953 1.00 56.56 O
ATOM 9 C3' A A1452 96.244 181.027 50.982 1.00 57.19 C
ATOM 10 O3' A A1452 96.477 182.076 51.897 1.00 59.52 O
ATOM 11 C2' A A1452 95.189 181.382 49.947 1.00 56.87 C
ATOM 12 O2' A A1452 95.250 182.722 49.508 1.00 57.16 O
ATOM 13 C1' A A1452 95.587 180.462 48.798 1.00 58.67 C
ATOM 14 N9 A A1452 94.829 179.209 48.742 1.00 61.94 N
ATOM 15 C8 A A1452 94.848 178.160 49.634 1.00 62.70 C
ATOM 16 N7 A A1452 94.096 177.147 49.273 1.00 63.08 N
ATOM 17 C5 A A1452 93.533 177.558 48.072 1.00 63.06 C
ATOM 18 C6 A A1452 92.652 176.929 47.178 1.00 63.15 C
ATOM 19 N6 A A1452 92.177 175.692 47.340 1.00 63.08 N
ATOM 20 N1 A A1452 92.274 177.617 46.080 1.00 63.90 N
ATOM 21 C2 A A1452 92.761 178.848 45.892 1.00 63.99 C
ATOM 22 N3 A A1452 93.603 179.542 46.649 1.00 63.98 N
ATOM 23 C4 A A1452 93.959 178.832 47.740 1.00 63.24 C
ATOM 24 P A A1453 96.097 181.874 53.443 1.00 62.60 P
ATOM 25 OP1 A A1453 96.321 183.182 54.126 1.00 61.75 O
ATOM 26 OP2 A A1453 96.733 180.645 53.992 1.00 64.06 O
ATOM 27 O5' A A1453 94.536 181.568 53.376 1.00 61.09 O
TER
ATOM 1 O3' A B1407 83.914 180.225 46.832 1.00 46.95 O
ATOM 2 P G B1408 84.365 181.159 45.623 1.00 47.08 P
ATOM 3 OP1 G B1408 84.695 182.453 46.260 1.00 47.06 O
ATOM 4 OP2 G B1408 83.332 181.115 44.555 1.00 47.06 O
ATOM 5 O5' G B1408 85.695 180.455 45.110 1.00 45.57 O
ATOM 6 C5' G B1408 85.704 179.073 44.735 1.00 47.97 C
ATOM 7 C4' G B1408 87.119 178.613 44.512 1.00 50.29 C
ATOM 8 O4' G B1408 87.694 179.389 43.432 1.00 51.37 O
ATOM 9 C3' G B1408 88.062 178.808 45.689 1.00 51.04 C
ATOM 10 O3' G B1408 88.053 177.673 46.544 1.00 52.08 O
ATOM 11 C2' G B1408 89.402 178.914 44.992 1.00 51.78 C
ATOM 12 O2' G B1408 89.782 177.618 44.587 1.00 50.63 O
ATOM 13 C1' G B1408 89.029 179.726 43.748 1.00 52.66 C
ATOM 14 N9 G B1408 89.098 181.187 43.852 1.00 54.92 N
ATOM 15 C8 G B1408 88.160 182.071 43.370 1.00 56.09 C
ATOM 16 N7 G B1408 88.507 183.318 43.503 1.00 57.12 N
ATOM 17 C5 G B1408 89.740 183.265 44.129 1.00 57.13 C
ATOM 18 C6 G B1408 90.612 184.311 44.501 1.00 57.99 C
ATOM 19 O6 G B1408 90.470 185.532 44.336 1.00 58.83 O
ATOM 20 N1 G B1408 91.753 183.820 45.116 1.00 59.52 N
ATOM 21 C2 G B1408 92.022 182.488 45.341 1.00 59.15 C
ATOM 22 N2 G B1408 93.192 182.214 45.963 1.00 58.96 N
ATOM 23 N3 G B1408 91.217 181.501 44.987 1.00 57.30 N
ATOM 24 C4 G B1408 90.106 181.957 44.385 1.00 55.86 C
ATOM 25 P C B1409 87.353 177.768 47.978 1.00 52.77 P
ATOM 26 OP1 C B1409 87.147 176.362 48.425 1.00 53.37 O
ATOM 27 OP2 C B1409 86.192 178.666 47.813 1.00 53.16 O
ATOM 28 O5' C B1409 88.436 178.481 48.900 1.00 54.37 O
TER
Atoms:
OP1: (100.059,177.691,52.419)
OP2: (98.000,176.265,51.848)
C3': (96.244,181.027,50.982)
C1': (95.587,180.462,48.798)
C5': (98.552,179.934,50.781)
O4': (96.964,180.147,48.953)
C8: (94.848,178.160,49.634)
O2': (95.250,182.722,49.508)
C6: (92.652,176.929,47.178)
C5: (93.533,177.558,48.072)
C4: (93.959,178.832,47.740)
P: (98.908,177.410,51.537)
C4': (97.475,180.790,50.140)
C2': (95.189,181.382,49.947)
C2: (92.761,178.848,45.892)
N1: (92.274,177.617,46.080)
N3: (93.603,179.542,46.649)
N6: (92.177,175.692,47.340)
N7: (94.096,177.147,49.273)
N9: (94.829,179.209,48.742)
O5': (97.997,178.710,51.338)
O3': (96.477,182.076,51.897)
OP2: (98.000,176.265,51.848)
C3': (96.244,181.027,50.982)
C1': (95.587,180.462,48.798)
C5': (98.552,179.934,50.781)
O4': (96.964,180.147,48.953)
C8: (94.848,178.160,49.634)
O2': (95.250,182.722,49.508)
C6: (92.652,176.929,47.178)
C5: (93.533,177.558,48.072)
C4: (93.959,178.832,47.740)
P: (98.908,177.410,51.537)
C4': (97.475,180.790,50.140)
C2': (95.189,181.382,49.947)
C2: (92.761,178.848,45.892)
N1: (92.274,177.617,46.080)
N3: (93.603,179.542,46.649)
N6: (92.177,175.692,47.340)
N7: (94.096,177.147,49.273)
N9: (94.829,179.209,48.742)
O5': (97.997,178.710,51.338)
O3': (96.477,182.076,51.897)
OP1: (84.695,182.453,46.260)
OP2: (83.332,181.115,44.555)
C3': (88.062,178.808,45.689)
C1': (89.029,179.726,43.748)
C5': (85.704,179.073,44.735)
O6: (90.470,185.532,44.336)
O4': (87.694,179.389,43.432)
C8: (88.160,182.071,43.370)
C2: (92.022,182.488,45.341)
C6: (90.612,184.311,44.501)
C5: (89.740,183.265,44.129)
C4: (90.106,181.957,44.385)
P: (84.365,181.159,45.623)
C4': (87.119,178.613,44.512)
C2': (89.402,178.914,44.992)
O2': (89.782,177.618,44.587)
N1: (91.753,183.820,45.116)
N2: (93.192,182.214,45.963)
N3: (91.217,181.501,44.987)
N7: (88.507,183.318,43.503)
N9: (89.098,181.187,43.852)
O5': (85.695,180.455,45.110)
O3': (88.053,177.673,46.544)
OP2: (83.332,181.115,44.555)
C3': (88.062,178.808,45.689)
C1': (89.029,179.726,43.748)
C5': (85.704,179.073,44.735)
O6: (90.470,185.532,44.336)
O4': (87.694,179.389,43.432)
C8: (88.160,182.071,43.370)
C2: (92.022,182.488,45.341)
C6: (90.612,184.311,44.501)
C5: (89.740,183.265,44.129)
C4: (90.106,181.957,44.385)
P: (84.365,181.159,45.623)
C4': (87.119,178.613,44.512)
C2': (89.402,178.914,44.992)
O2': (89.782,177.618,44.587)
N1: (91.753,183.820,45.116)
N2: (93.192,182.214,45.963)
N3: (91.217,181.501,44.987)
N7: (88.507,183.318,43.503)
N9: (89.098,181.187,43.852)
O5': (85.695,180.455,45.110)
O3': (88.053,177.673,46.544)
Image (generated by PyMOL):