Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ7:01041:01005
Extra
PDB:
ATOM 1 O3' A A1040 37.297 101.117 101.237 1.00 41.03 O
ATOM 2 P A A1041 37.058 100.804 102.800 1.00 38.11 P
ATOM 3 OP1 A A1041 35.616 101.070 103.039 1.00 39.18 O
ATOM 4 OP2 A A1041 38.080 101.499 103.626 1.00 39.64 O
ATOM 5 O5' A A1041 37.293 99.235 102.904 1.00 39.69 O
ATOM 6 C5' A A1041 36.493 98.327 102.130 1.00 40.27 C
ATOM 7 C4' A A1041 37.370 97.308 101.444 1.00 40.78 C
ATOM 8 O4' A A1041 38.327 97.987 100.591 1.00 42.17 O
ATOM 9 C3' A A1041 38.239 96.438 102.334 1.00 40.86 C
ATOM 10 O3' A A1041 37.482 95.359 102.887 1.00 43.00 O
ATOM 11 C2' A A1041 39.309 95.967 101.356 1.00 40.94 C
ATOM 12 O2' A A1041 38.877 94.930 100.506 1.00 41.19 O
ATOM 13 C1' A A1041 39.516 97.218 100.508 1.00 40.92 C
ATOM 14 N9 A A1041 40.649 98.038 100.943 1.00 41.31 N
ATOM 15 C8 A A1041 40.752 98.829 102.061 1.00 40.45 C
ATOM 16 N7 A A1041 41.903 99.443 102.169 1.00 40.96 N
ATOM 17 C5 A A1041 42.608 99.031 101.046 1.00 41.22 C
ATOM 18 C6 A A1041 43.897 99.331 100.573 1.00 40.09 C
ATOM 19 N6 A A1041 44.738 100.165 101.186 1.00 38.76 N
ATOM 20 N1 A A1041 44.296 98.739 99.428 1.00 40.10 N
ATOM 21 C2 A A1041 43.452 97.913 98.803 1.00 38.34 C
ATOM 22 N3 A A1041 42.220 97.562 99.139 1.00 39.60 N
ATOM 23 C4 A A1041 41.850 98.162 100.285 1.00 40.54 C
ATOM 24 P C A1042 38.177 94.314 103.898 1.00 42.23 P
ATOM 25 OP1 C A1042 39.651 94.387 103.768 1.00 43.87 O
ATOM 26 OP2 C A1042 37.500 93.016 103.672 1.00 46.44 O
ATOM 27 O5' C A1042 37.776 94.814 105.356 1.00 41.11 O
TER
ATOM 1 O3' G B1004 51.772 95.829 93.851 1.00 33.08 O
ATOM 2 P G B1005 51.641 95.184 95.341 1.00 30.75 P
ATOM 3 OP1 G B1005 52.802 95.640 96.141 1.00 31.44 O
ATOM 4 OP2 G B1005 51.368 93.722 95.233 1.00 30.07 O
ATOM 5 O5' G B1005 50.349 95.872 95.965 1.00 29.75 O
ATOM 6 C5' G B1005 50.394 97.214 96.446 1.00 28.97 C
ATOM 7 C4' G B1005 49.064 97.596 97.045 1.00 30.81 C
ATOM 8 O4' G B1005 48.019 97.444 96.047 1.00 31.93 O
ATOM 9 C3' G B1005 48.568 96.751 98.204 1.00 30.86 C
ATOM 10 O3' G B1005 49.171 97.142 99.427 1.00 34.54 O
ATOM 11 C2' G B1005 47.081 97.062 98.181 1.00 30.28 C
ATOM 12 O2' G B1005 46.803 98.362 98.666 1.00 30.74 O
ATOM 13 C1' G B1005 46.812 97.045 96.678 1.00 30.20 C
ATOM 14 N9 G B1005 46.469 95.704 96.213 1.00 29.27 N
ATOM 15 C8 G B1005 47.261 94.842 95.496 1.00 27.32 C
ATOM 16 N7 G B1005 46.682 93.701 95.255 1.00 29.19 N
ATOM 17 C5 G B1005 45.430 93.821 95.843 1.00 30.08 C
ATOM 18 C6 G B1005 44.352 92.899 95.913 1.00 30.56 C
ATOM 19 O6 G B1005 44.278 91.757 95.442 1.00 32.51 O
ATOM 20 N1 G B1005 43.278 93.427 96.609 1.00 29.88 N
ATOM 21 C2 G B1005 43.236 94.679 97.161 1.00 31.53 C
ATOM 22 N2 G B1005 42.107 95.014 97.796 1.00 29.73 N
ATOM 23 N3 G B1005 44.228 95.544 97.098 1.00 32.15 N
ATOM 24 C4 G B1005 45.285 95.052 96.431 1.00 28.93 C
ATOM 25 P U B1006 49.337 96.074 100.615 1.00 34.04 P
ATOM 26 OP1 U B1006 50.190 96.731 101.642 1.00 38.07 O
ATOM 27 OP2 U B1006 49.765 94.785 100.028 1.00 34.16 O
ATOM 28 O5' U B1006 47.870 95.926 101.215 1.00 31.23 O
TER
ATOM 2 P A A1041 37.058 100.804 102.800 1.00 38.11 P
ATOM 3 OP1 A A1041 35.616 101.070 103.039 1.00 39.18 O
ATOM 4 OP2 A A1041 38.080 101.499 103.626 1.00 39.64 O
ATOM 5 O5' A A1041 37.293 99.235 102.904 1.00 39.69 O
ATOM 6 C5' A A1041 36.493 98.327 102.130 1.00 40.27 C
ATOM 7 C4' A A1041 37.370 97.308 101.444 1.00 40.78 C
ATOM 8 O4' A A1041 38.327 97.987 100.591 1.00 42.17 O
ATOM 9 C3' A A1041 38.239 96.438 102.334 1.00 40.86 C
ATOM 10 O3' A A1041 37.482 95.359 102.887 1.00 43.00 O
ATOM 11 C2' A A1041 39.309 95.967 101.356 1.00 40.94 C
ATOM 12 O2' A A1041 38.877 94.930 100.506 1.00 41.19 O
ATOM 13 C1' A A1041 39.516 97.218 100.508 1.00 40.92 C
ATOM 14 N9 A A1041 40.649 98.038 100.943 1.00 41.31 N
ATOM 15 C8 A A1041 40.752 98.829 102.061 1.00 40.45 C
ATOM 16 N7 A A1041 41.903 99.443 102.169 1.00 40.96 N
ATOM 17 C5 A A1041 42.608 99.031 101.046 1.00 41.22 C
ATOM 18 C6 A A1041 43.897 99.331 100.573 1.00 40.09 C
ATOM 19 N6 A A1041 44.738 100.165 101.186 1.00 38.76 N
ATOM 20 N1 A A1041 44.296 98.739 99.428 1.00 40.10 N
ATOM 21 C2 A A1041 43.452 97.913 98.803 1.00 38.34 C
ATOM 22 N3 A A1041 42.220 97.562 99.139 1.00 39.60 N
ATOM 23 C4 A A1041 41.850 98.162 100.285 1.00 40.54 C
ATOM 24 P C A1042 38.177 94.314 103.898 1.00 42.23 P
ATOM 25 OP1 C A1042 39.651 94.387 103.768 1.00 43.87 O
ATOM 26 OP2 C A1042 37.500 93.016 103.672 1.00 46.44 O
ATOM 27 O5' C A1042 37.776 94.814 105.356 1.00 41.11 O
TER
ATOM 1 O3' G B1004 51.772 95.829 93.851 1.00 33.08 O
ATOM 2 P G B1005 51.641 95.184 95.341 1.00 30.75 P
ATOM 3 OP1 G B1005 52.802 95.640 96.141 1.00 31.44 O
ATOM 4 OP2 G B1005 51.368 93.722 95.233 1.00 30.07 O
ATOM 5 O5' G B1005 50.349 95.872 95.965 1.00 29.75 O
ATOM 6 C5' G B1005 50.394 97.214 96.446 1.00 28.97 C
ATOM 7 C4' G B1005 49.064 97.596 97.045 1.00 30.81 C
ATOM 8 O4' G B1005 48.019 97.444 96.047 1.00 31.93 O
ATOM 9 C3' G B1005 48.568 96.751 98.204 1.00 30.86 C
ATOM 10 O3' G B1005 49.171 97.142 99.427 1.00 34.54 O
ATOM 11 C2' G B1005 47.081 97.062 98.181 1.00 30.28 C
ATOM 12 O2' G B1005 46.803 98.362 98.666 1.00 30.74 O
ATOM 13 C1' G B1005 46.812 97.045 96.678 1.00 30.20 C
ATOM 14 N9 G B1005 46.469 95.704 96.213 1.00 29.27 N
ATOM 15 C8 G B1005 47.261 94.842 95.496 1.00 27.32 C
ATOM 16 N7 G B1005 46.682 93.701 95.255 1.00 29.19 N
ATOM 17 C5 G B1005 45.430 93.821 95.843 1.00 30.08 C
ATOM 18 C6 G B1005 44.352 92.899 95.913 1.00 30.56 C
ATOM 19 O6 G B1005 44.278 91.757 95.442 1.00 32.51 O
ATOM 20 N1 G B1005 43.278 93.427 96.609 1.00 29.88 N
ATOM 21 C2 G B1005 43.236 94.679 97.161 1.00 31.53 C
ATOM 22 N2 G B1005 42.107 95.014 97.796 1.00 29.73 N
ATOM 23 N3 G B1005 44.228 95.544 97.098 1.00 32.15 N
ATOM 24 C4 G B1005 45.285 95.052 96.431 1.00 28.93 C
ATOM 25 P U B1006 49.337 96.074 100.615 1.00 34.04 P
ATOM 26 OP1 U B1006 50.190 96.731 101.642 1.00 38.07 O
ATOM 27 OP2 U B1006 49.765 94.785 100.028 1.00 34.16 O
ATOM 28 O5' U B1006 47.870 95.926 101.215 1.00 31.23 O
TER
Atoms:
OP1: (35.616,101.070,103.039)
OP2: (38.080,101.499,103.626)
C3': (38.239,96.438,102.334)
C1': (39.516,97.218,100.508)
C5': (36.493,98.327,102.130)
O4': (38.327,97.987,100.591)
C8: (40.752,98.829,102.061)
O2': (38.877,94.930,100.506)
C6: (43.897,99.331,100.573)
C5: (42.608,99.031,101.046)
C4: (41.850,98.162,100.285)
P: (37.058,100.804,102.800)
C4': (37.370,97.308,101.444)
C2': (39.309,95.967,101.356)
C2: (43.452,97.913,98.803)
N1: (44.296,98.739,99.428)
N3: (42.220,97.562,99.139)
N6: (44.738,100.165,101.186)
N7: (41.903,99.443,102.169)
N9: (40.649,98.038,100.943)
O5': (37.293,99.235,102.904)
O3': (37.482,95.359,102.887)
OP2: (38.080,101.499,103.626)
C3': (38.239,96.438,102.334)
C1': (39.516,97.218,100.508)
C5': (36.493,98.327,102.130)
O4': (38.327,97.987,100.591)
C8: (40.752,98.829,102.061)
O2': (38.877,94.930,100.506)
C6: (43.897,99.331,100.573)
C5: (42.608,99.031,101.046)
C4: (41.850,98.162,100.285)
P: (37.058,100.804,102.800)
C4': (37.370,97.308,101.444)
C2': (39.309,95.967,101.356)
C2: (43.452,97.913,98.803)
N1: (44.296,98.739,99.428)
N3: (42.220,97.562,99.139)
N6: (44.738,100.165,101.186)
N7: (41.903,99.443,102.169)
N9: (40.649,98.038,100.943)
O5': (37.293,99.235,102.904)
O3': (37.482,95.359,102.887)
OP1: (52.802,95.640,96.141)
OP2: (51.368,93.722,95.233)
C3': (48.568,96.751,98.204)
C1': (46.812,97.045,96.678)
C5': (50.394,97.214,96.446)
O6: (44.278,91.757,95.442)
O4': (48.019,97.444,96.047)
C8: (47.261,94.842,95.496)
C2: (43.236,94.679,97.161)
C6: (44.352,92.899,95.913)
C5: (45.430,93.821,95.843)
C4: (45.285,95.052,96.431)
P: (51.641,95.184,95.341)
C4': (49.064,97.596,97.045)
C2': (47.081,97.062,98.181)
O2': (46.803,98.362,98.666)
N1: (43.278,93.427,96.609)
N2: (42.107,95.014,97.796)
N3: (44.228,95.544,97.098)
N7: (46.682,93.701,95.255)
N9: (46.469,95.704,96.213)
O5': (50.349,95.872,95.965)
O3': (49.171,97.142,99.427)
OP2: (51.368,93.722,95.233)
C3': (48.568,96.751,98.204)
C1': (46.812,97.045,96.678)
C5': (50.394,97.214,96.446)
O6: (44.278,91.757,95.442)
O4': (48.019,97.444,96.047)
C8: (47.261,94.842,95.496)
C2: (43.236,94.679,97.161)
C6: (44.352,92.899,95.913)
C5: (45.430,93.821,95.843)
C4: (45.285,95.052,96.431)
P: (51.641,95.184,95.341)
C4': (49.064,97.596,97.045)
C2': (47.081,97.062,98.181)
O2': (46.803,98.362,98.666)
N1: (43.278,93.427,96.609)
N2: (42.107,95.014,97.796)
N3: (44.228,95.544,97.098)
N7: (46.682,93.701,95.255)
N9: (46.469,95.704,96.213)
O5': (50.349,95.872,95.965)
O3': (49.171,97.142,99.427)
Image (generated by PyMOL):