ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2OTJ:0524:02021

Extra

PDB:
ATOM 1 O3' G A 523 28.844 126.447 105.769 1.00 49.18 O
ATOM 2 P A A 524 28.096 125.402 104.820 1.00 49.19 P
ATOM 3 OP1 A A 524 26.806 126.034 104.429 1.00 48.91 O
ATOM 4 OP2 A A 524 28.098 124.073 105.494 1.00 48.17 O
ATOM 5 O5' A A 524 29.052 125.324 103.545 1.00 49.22 O
ATOM 6 C5' A A 524 29.179 126.429 102.628 1.00 48.11 C
ATOM 7 C4' A A 524 30.561 126.438 102.014 1.00 48.48 C
ATOM 8 O4' A A 524 31.518 126.988 102.944 1.00 49.77 O
ATOM 9 C3' A A 524 31.126 125.079 101.648 1.00 47.64 C
ATOM 10 O3' A A 524 30.672 124.709 100.359 1.00 47.08 O
ATOM 11 C2' A A 524 32.629 125.326 101.640 1.00 48.43 C
ATOM 12 O2' A A 524 33.093 125.850 100.413 1.00 49.55 O
ATOM 13 C1' A A 524 32.777 126.378 102.743 1.00 49.59 C
ATOM 14 N9 A A 524 33.250 125.880 104.032 1.00 50.29 N
ATOM 15 C8 A A 524 32.612 125.044 104.913 1.00 50.44 C
ATOM 16 N7 A A 524 33.302 124.793 105.997 1.00 50.76 N
ATOM 17 C5 A A 524 34.477 125.510 105.817 1.00 51.21 C
ATOM 18 C6 A A 524 35.626 125.664 106.613 1.00 51.38 C
ATOM 19 N6 A A 524 35.784 125.075 107.802 1.00 51.71 N
ATOM 20 N1 A A 524 36.616 126.454 106.143 1.00 50.65 N
ATOM 21 C2 A A 524 36.454 127.047 104.958 1.00 50.53 C
ATOM 22 N3 A A 524 35.424 126.981 104.118 1.00 51.04 N
ATOM 23 C4 A A 524 34.458 126.185 104.612 1.00 50.95 C
ATOM 24 P G A 525 30.013 123.274 100.124 1.00 45.69 P
ATOM 25 OP1 G A 525 28.818 123.475 99.283 1.00 45.57 O
ATOM 26 OP2 G A 525 29.877 122.629 101.444 1.00 46.76 O
ATOM 27 O5' G A 525 31.100 122.504 99.259 1.00 45.14 O
TER

ATOM 1 O3' A B2020 44.258 122.620 105.600 1.00 42.08 O
ATOM 2 P G B2021 44.864 124.031 105.123 1.00 45.21 P
ATOM 3 OP1 G B2021 44.963 123.980 103.631 1.00 44.57 O
ATOM 4 OP2 G B2021 46.062 124.370 105.932 1.00 44.76 O
ATOM 5 O5' G B2021 43.727 125.070 105.515 1.00 44.07 O
ATOM 6 C5' G B2021 43.305 125.215 106.879 1.00 42.20 C
ATOM 7 C4' G B2021 41.897 125.745 106.922 1.00 41.07 C
ATOM 8 O4' G B2021 41.869 126.995 106.203 1.00 40.86 O
ATOM 9 C3' G B2021 40.853 124.889 106.229 1.00 40.72 C
ATOM 10 O3' G B2021 40.328 123.911 107.106 1.00 40.11 O
ATOM 11 C2' G B2021 39.799 125.910 105.849 1.00 40.73 C
ATOM 12 O2' G B2021 39.004 126.276 106.952 1.00 40.66 O
ATOM 13 C1' G B2021 40.673 127.099 105.465 1.00 40.26 C
ATOM 14 N9 G B2021 41.047 127.164 104.059 1.00 40.35 N
ATOM 15 C8 G B2021 42.324 127.288 103.572 1.00 39.90 C
ATOM 16 N7 G B2021 42.367 127.401 102.276 1.00 40.28 N
ATOM 17 C5 G B2021 41.039 127.335 101.880 1.00 41.11 C
ATOM 18 C6 G B2021 40.468 127.422 100.591 1.00 42.47 C
ATOM 19 O6 G B2021 41.041 127.621 99.505 1.00 42.98 O
ATOM 20 N1 G B2021 39.086 127.267 100.635 1.00 43.07 N
ATOM 21 C2 G B2021 38.351 127.067 101.777 1.00 42.94 C
ATOM 22 N2 G B2021 37.026 126.906 101.612 1.00 43.57 N
ATOM 23 N3 G B2021 38.873 127.019 102.990 1.00 41.88 N
ATOM 24 C4 G B2021 40.213 127.157 102.966 1.00 40.76 C
ATOM 25 P U B2022 40.098 122.420 106.578 1.00 40.78 P
ATOM 26 OP1 U B2022 39.600 121.633 107.732 1.00 40.77 O
ATOM 27 OP2 U B2022 41.312 121.979 105.862 1.00 39.95 O
ATOM 28 O5' U B2022 38.931 122.557 105.506 1.00 41.31 O
TER

Atoms:
OP1: (26.806,126.034,104.429)
OP2: (28.098,124.073,105.494)
C3': (31.126,125.079,101.648)
C1': (32.777,126.378,102.743)
C5': (29.179,126.429,102.628)
O4': (31.518,126.988,102.944)
C8: (32.612,125.044,104.913)
O2': (33.093,125.850,100.413)
C6: (35.626,125.664,106.613)
C5: (34.477,125.510,105.817)
C4: (34.458,126.185,104.612)
P: (28.096,125.402,104.820)
C4': (30.561,126.438,102.014)
C2': (32.629,125.326,101.640)
C2: (36.454,127.047,104.958)
N1: (36.616,126.454,106.143)
N3: (35.424,126.981,104.118)
N6: (35.784,125.075,107.802)
N7: (33.302,124.793,105.997)
N9: (33.250,125.880,104.032)
O5': (29.052,125.324,103.545)
O3': (30.672,124.709,100.359)
OP1: (44.963,123.980,103.631)
OP2: (46.062,124.370,105.932)
C3': (40.853,124.889,106.229)
C1': (40.673,127.099,105.465)
C5': (43.305,125.215,106.879)
O6: (41.041,127.621,99.505)
O4': (41.869,126.995,106.203)
C8: (42.324,127.288,103.572)
C2: (38.351,127.067,101.777)
C6: (40.468,127.422,100.591)
C5: (41.039,127.335,101.880)
C4: (40.213,127.157,102.966)
P: (44.864,124.031,105.123)
C4': (41.897,125.745,106.922)
C2': (39.799,125.910,105.849)
O2': (39.004,126.276,106.952)
N1: (39.086,127.267,100.635)
N2: (37.026,126.906,101.612)
N3: (38.873,127.019,102.990)
N7: (42.367,127.401,102.276)
N9: (41.047,127.164,104.059)
O5': (43.727,125.070,105.515)
O3': (40.328,123.911,107.106)
Image (generated by PyMOL):
PyMOL image
show in jmol