ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CPW:059:044

Extra

PDB:
ATOM 1 O3' U A 58 55.583 163.443 26.994 1.00 52.66 O
ATOM 2 P A A 59 54.834 163.813 28.368 1.00 54.00 P
ATOM 3 OP1 A A 59 53.484 164.349 28.064 1.00 54.20 O
ATOM 4 OP2 A A 59 55.774 164.627 29.180 1.00 54.45 O
ATOM 5 O5' A A 59 54.603 162.399 29.068 1.00 53.43 O
ATOM 6 C5' A A 59 55.715 161.567 29.347 1.00 52.73 C
ATOM 7 C4' A A 59 55.346 160.420 30.250 1.00 51.84 C
ATOM 8 O4' A A 59 56.646 159.949 30.684 1.00 52.84 O
ATOM 9 C3' A A 59 54.569 160.752 31.530 1.00 52.08 C
ATOM 10 O3' A A 59 53.206 160.316 31.440 1.00 52.51 O
ATOM 11 C2' A A 59 55.292 159.936 32.591 1.00 52.73 C
ATOM 12 O2' A A 59 54.869 158.591 32.573 1.00 51.21 O
ATOM 13 C1' A A 59 56.731 160.000 32.088 1.00 54.11 C
ATOM 14 N9 A A 59 57.419 161.244 32.454 1.00 53.95 N
ATOM 15 C8 A A 59 57.120 162.525 32.049 1.00 52.96 C
ATOM 16 N7 A A 59 57.890 163.441 32.582 1.00 53.88 N
ATOM 17 C5 A A 59 58.760 162.720 33.387 1.00 53.82 C
ATOM 18 C6 A A 59 59.812 163.112 34.234 1.00 53.24 C
ATOM 19 N6 A A 59 60.172 164.381 34.433 1.00 52.26 N
ATOM 20 N1 A A 59 60.488 162.141 34.885 1.00 53.99 N
ATOM 21 C2 A A 59 60.120 160.871 34.701 1.00 53.65 C
ATOM 22 N3 A A 59 59.146 160.377 33.943 1.00 54.59 N
ATOM 23 C4 A A 59 58.494 161.364 33.305 1.00 54.21 C
ATOM 24 P A A 60 52.156 160.667 32.620 1.00 52.93 P
ATOM 25 OP1 A A 60 51.501 161.957 32.274 1.00 54.79 O
ATOM 26 OP2 A A 60 52.836 160.531 33.920 1.00 52.86 O
ATOM 27 O5' A A 60 51.058 159.510 32.512 1.00 54.26 O
TER

ATOM 1 O3' C B 43 63.628 160.040 44.096 1.00 49.07 O
ATOM 2 P G B 44 62.255 160.874 43.986 1.00 49.76 P
ATOM 3 OP1 G B 44 62.307 161.905 45.049 1.00 51.58 O
ATOM 4 OP2 G B 44 61.086 159.958 43.915 1.00 50.10 O
ATOM 5 O5' G B 44 62.386 161.601 42.575 1.00 50.38 O
ATOM 6 C5' G B 44 61.232 162.136 41.910 1.00 49.64 C
ATOM 7 C4' G B 44 61.453 162.160 40.420 1.00 49.05 C
ATOM 8 O4' G B 44 61.871 160.844 39.986 1.00 49.36 O
ATOM 9 C3' G B 44 60.199 162.478 39.620 1.00 49.73 C
ATOM 10 O3' G B 44 60.060 163.877 39.431 1.00 50.46 O
ATOM 11 C2' G B 44 60.433 161.730 38.315 1.00 50.82 C
ATOM 12 O2' G B 44 61.286 162.430 37.431 1.00 48.43 O
ATOM 13 C1' G B 44 61.169 160.482 38.809 1.00 52.34 C
ATOM 14 N9 G B 44 60.290 159.361 39.147 1.00 54.29 N
ATOM 15 C8 G B 44 60.175 158.754 40.378 1.00 54.37 C
ATOM 16 N7 G B 44 59.357 157.742 40.378 1.00 54.69 N
ATOM 17 C5 G B 44 58.887 157.679 39.074 1.00 55.35 C
ATOM 18 C6 G B 44 57.980 156.775 38.471 1.00 55.30 C
ATOM 19 O6 G B 44 57.401 155.810 38.980 1.00 56.07 O
ATOM 20 N1 G B 44 57.775 157.075 37.132 1.00 55.18 N
ATOM 21 C2 G B 44 58.370 158.103 36.454 1.00 54.05 C
ATOM 22 N2 G B 44 58.041 158.217 35.166 1.00 53.70 N
ATOM 23 N3 G B 44 59.226 158.953 36.998 1.00 53.93 N
ATOM 24 C4 G B 44 59.439 158.683 38.303 1.00 54.61 C
ATOM 25 P U B 45 58.673 164.598 39.797 1.00 53.69 P
ATOM 26 OP1 U B 45 58.858 166.068 39.673 1.00 54.18 O
ATOM 27 OP2 U B 45 58.170 164.028 41.074 1.00 54.46 O
ATOM 28 O5' U B 45 57.676 164.131 38.651 1.00 53.30 O
TER

Atoms:
OP1: (53.484,164.349,28.064)
OP2: (55.774,164.627,29.180)
C3': (54.569,160.752,31.530)
C1': (56.731,160.000,32.088)
C5': (55.715,161.567,29.347)
O4': (56.646,159.949,30.684)
C8: (57.120,162.525,32.049)
O2': (54.869,158.591,32.573)
C6: (59.812,163.112,34.234)
C5: (58.760,162.720,33.387)
C4: (58.494,161.364,33.305)
P: (54.834,163.813,28.368)
C4': (55.346,160.420,30.250)
C2': (55.292,159.936,32.591)
C2: (60.120,160.871,34.701)
N1: (60.488,162.141,34.885)
N3: (59.146,160.377,33.943)
N6: (60.172,164.381,34.433)
N7: (57.890,163.441,32.582)
N9: (57.419,161.244,32.454)
O5': (54.603,162.399,29.068)
O3': (53.206,160.316,31.440)
OP1: (62.307,161.905,45.049)
OP2: (61.086,159.958,43.915)
C3': (60.199,162.478,39.620)
C1': (61.169,160.482,38.809)
C5': (61.232,162.136,41.910)
O6: (57.401,155.810,38.980)
O4': (61.871,160.844,39.986)
C8: (60.175,158.754,40.378)
C2: (58.370,158.103,36.454)
C6: (57.980,156.775,38.471)
C5: (58.887,157.679,39.074)
C4: (59.439,158.683,38.303)
P: (62.255,160.874,43.986)
C4': (61.453,162.160,40.420)
C2': (60.433,161.730,38.315)
O2': (61.286,162.430,37.431)
N1: (57.775,157.075,37.132)
N2: (58.041,158.217,35.166)
N3: (59.226,158.953,36.998)
N7: (59.357,157.742,40.378)
N9: (60.290,159.361,39.147)
O5': (62.386,161.601,42.575)
O3': (60.060,163.877,39.431)
Image (generated by PyMOL):
PyMOL image
show in jmol