Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11479:1846
Extra
PDB:
ATOM 1 O3' A A1478 17.997 9.400 127.287 1.00 48.27 O
ATOM 2 P A A1479 18.506 7.884 127.305 1.00 52.24 P
ATOM 3 OP1 A A1479 17.514 7.099 128.042 1.00 52.49 O
ATOM 4 OP2 A A1479 19.907 7.895 127.814 1.00 52.34 O
ATOM 5 O5' A A1479 18.494 7.479 125.757 1.00 51.61 O
ATOM 6 C5' A A1479 17.386 7.745 124.914 1.00 51.42 C
ATOM 7 C4' A A1479 17.827 8.018 123.489 1.00 50.91 C
ATOM 8 O4' A A1479 18.484 9.303 123.451 1.00 51.02 O
ATOM 9 C3' A A1479 18.851 7.043 122.890 1.00 50.50 C
ATOM 10 O3' A A1479 18.275 5.911 122.261 1.00 50.18 O
ATOM 11 C2' A A1479 19.612 7.900 121.903 1.00 50.21 C
ATOM 12 O2' A A1479 18.928 7.972 120.669 1.00 49.85 O
ATOM 13 C1' A A1479 19.583 9.270 122.567 1.00 50.63 C
ATOM 14 N9 A A1479 20.840 9.537 123.323 1.00 50.85 N
ATOM 15 C8 A A1479 21.229 8.966 124.494 1.00 51.17 C
ATOM 16 N7 A A1479 22.384 9.356 124.927 1.00 51.31 N
ATOM 17 C5 A A1479 22.824 10.225 123.964 1.00 51.06 C
ATOM 18 C6 A A1479 24.013 10.969 123.871 1.00 51.08 C
ATOM 19 N6 A A1479 24.969 10.929 124.795 1.00 51.37 N
ATOM 20 N1 A A1479 24.175 11.751 122.791 1.00 50.80 N
ATOM 21 C2 A A1479 23.173 11.759 121.883 1.00 50.53 C
ATOM 22 N3 A A1479 22.014 11.102 121.865 1.00 50.49 N
ATOM 23 C4 A A1479 21.896 10.343 122.958 1.00 50.77 C
ATOM 24 P G A1480 18.452 4.432 122.877 1.00 50.32 P
ATOM 25 OP1 G A1480 17.757 3.556 121.966 1.00 49.96 O
ATOM 26 OP2 G A1480 18.019 4.501 124.300 1.00 50.87 O
ATOM 27 O5' G A1480 20.013 4.110 122.837 1.00 50.17 O
TER
ATOM 1 O3' G B 845 28.642 17.653 116.676 1.00 45.15 O
ATOM 2 P G B 846 28.992 16.141 116.312 1.00 46.30 P
ATOM 3 OP1 G B 846 30.446 15.984 116.482 1.00 46.28 O
ATOM 4 OP2 G B 846 28.404 15.842 114.998 1.00 45.85 O
ATOM 5 O5' G B 846 28.236 15.341 117.430 1.00 46.54 O
ATOM 6 C5' G B 846 28.458 15.610 118.797 1.00 47.03 C
ATOM 7 C4' G B 846 27.397 14.962 119.647 1.00 47.25 C
ATOM 8 O4' G B 846 26.113 15.558 119.357 1.00 47.30 O
ATOM 9 C3' G B 846 27.153 13.491 119.411 1.00 46.93 C
ATOM 10 O3' G B 846 28.114 12.679 120.026 1.00 46.97 O
ATOM 11 C2' G B 846 25.792 13.328 120.005 1.00 47.16 C
ATOM 12 O2' G B 846 25.895 13.445 121.402 1.00 47.66 O
ATOM 13 C1' G B 846 25.112 14.585 119.493 1.00 47.23 C
ATOM 14 N9 G B 846 24.463 14.390 118.179 1.00 46.79 N
ATOM 15 C8 G B 846 24.829 14.921 116.963 1.00 46.47 C
ATOM 16 N7 G B 846 24.046 14.563 115.960 1.00 46.13 N
ATOM 17 C5 G B 846 23.067 13.771 116.563 1.00 46.24 C
ATOM 18 C6 G B 846 21.928 13.097 116.003 1.00 46.03 C
ATOM 19 O6 G B 846 21.512 13.053 114.813 1.00 45.68 O
ATOM 20 N1 G B 846 21.250 12.409 117.008 1.00 46.28 N
ATOM 21 C2 G B 846 21.605 12.383 118.328 1.00 46.68 C
ATOM 22 N2 G B 846 20.812 11.683 119.131 1.00 46.88 N
ATOM 23 N3 G B 846 22.641 13.000 118.859 1.00 46.89 N
ATOM 24 C4 G B 846 23.322 13.671 117.928 1.00 46.65 C
ATOM 25 P U B 847 28.646 11.383 119.274 1.00 45.42 P
ATOM 26 OP1 U B 847 29.694 10.780 120.107 1.00 45.58 O
ATOM 27 OP2 U B 847 28.982 11.787 117.884 1.00 45.00 O
ATOM 28 O5' U B 847 27.359 10.456 119.244 1.00 45.31 O
TER
ATOM 2 P A A1479 18.506 7.884 127.305 1.00 52.24 P
ATOM 3 OP1 A A1479 17.514 7.099 128.042 1.00 52.49 O
ATOM 4 OP2 A A1479 19.907 7.895 127.814 1.00 52.34 O
ATOM 5 O5' A A1479 18.494 7.479 125.757 1.00 51.61 O
ATOM 6 C5' A A1479 17.386 7.745 124.914 1.00 51.42 C
ATOM 7 C4' A A1479 17.827 8.018 123.489 1.00 50.91 C
ATOM 8 O4' A A1479 18.484 9.303 123.451 1.00 51.02 O
ATOM 9 C3' A A1479 18.851 7.043 122.890 1.00 50.50 C
ATOM 10 O3' A A1479 18.275 5.911 122.261 1.00 50.18 O
ATOM 11 C2' A A1479 19.612 7.900 121.903 1.00 50.21 C
ATOM 12 O2' A A1479 18.928 7.972 120.669 1.00 49.85 O
ATOM 13 C1' A A1479 19.583 9.270 122.567 1.00 50.63 C
ATOM 14 N9 A A1479 20.840 9.537 123.323 1.00 50.85 N
ATOM 15 C8 A A1479 21.229 8.966 124.494 1.00 51.17 C
ATOM 16 N7 A A1479 22.384 9.356 124.927 1.00 51.31 N
ATOM 17 C5 A A1479 22.824 10.225 123.964 1.00 51.06 C
ATOM 18 C6 A A1479 24.013 10.969 123.871 1.00 51.08 C
ATOM 19 N6 A A1479 24.969 10.929 124.795 1.00 51.37 N
ATOM 20 N1 A A1479 24.175 11.751 122.791 1.00 50.80 N
ATOM 21 C2 A A1479 23.173 11.759 121.883 1.00 50.53 C
ATOM 22 N3 A A1479 22.014 11.102 121.865 1.00 50.49 N
ATOM 23 C4 A A1479 21.896 10.343 122.958 1.00 50.77 C
ATOM 24 P G A1480 18.452 4.432 122.877 1.00 50.32 P
ATOM 25 OP1 G A1480 17.757 3.556 121.966 1.00 49.96 O
ATOM 26 OP2 G A1480 18.019 4.501 124.300 1.00 50.87 O
ATOM 27 O5' G A1480 20.013 4.110 122.837 1.00 50.17 O
TER
ATOM 1 O3' G B 845 28.642 17.653 116.676 1.00 45.15 O
ATOM 2 P G B 846 28.992 16.141 116.312 1.00 46.30 P
ATOM 3 OP1 G B 846 30.446 15.984 116.482 1.00 46.28 O
ATOM 4 OP2 G B 846 28.404 15.842 114.998 1.00 45.85 O
ATOM 5 O5' G B 846 28.236 15.341 117.430 1.00 46.54 O
ATOM 6 C5' G B 846 28.458 15.610 118.797 1.00 47.03 C
ATOM 7 C4' G B 846 27.397 14.962 119.647 1.00 47.25 C
ATOM 8 O4' G B 846 26.113 15.558 119.357 1.00 47.30 O
ATOM 9 C3' G B 846 27.153 13.491 119.411 1.00 46.93 C
ATOM 10 O3' G B 846 28.114 12.679 120.026 1.00 46.97 O
ATOM 11 C2' G B 846 25.792 13.328 120.005 1.00 47.16 C
ATOM 12 O2' G B 846 25.895 13.445 121.402 1.00 47.66 O
ATOM 13 C1' G B 846 25.112 14.585 119.493 1.00 47.23 C
ATOM 14 N9 G B 846 24.463 14.390 118.179 1.00 46.79 N
ATOM 15 C8 G B 846 24.829 14.921 116.963 1.00 46.47 C
ATOM 16 N7 G B 846 24.046 14.563 115.960 1.00 46.13 N
ATOM 17 C5 G B 846 23.067 13.771 116.563 1.00 46.24 C
ATOM 18 C6 G B 846 21.928 13.097 116.003 1.00 46.03 C
ATOM 19 O6 G B 846 21.512 13.053 114.813 1.00 45.68 O
ATOM 20 N1 G B 846 21.250 12.409 117.008 1.00 46.28 N
ATOM 21 C2 G B 846 21.605 12.383 118.328 1.00 46.68 C
ATOM 22 N2 G B 846 20.812 11.683 119.131 1.00 46.88 N
ATOM 23 N3 G B 846 22.641 13.000 118.859 1.00 46.89 N
ATOM 24 C4 G B 846 23.322 13.671 117.928 1.00 46.65 C
ATOM 25 P U B 847 28.646 11.383 119.274 1.00 45.42 P
ATOM 26 OP1 U B 847 29.694 10.780 120.107 1.00 45.58 O
ATOM 27 OP2 U B 847 28.982 11.787 117.884 1.00 45.00 O
ATOM 28 O5' U B 847 27.359 10.456 119.244 1.00 45.31 O
TER
Atoms:
OP1: (17.514,7.099,128.042)
OP2: (19.907,7.895,127.814)
C3': (18.851,7.043,122.890)
C1': (19.583,9.270,122.567)
C5': (17.386,7.745,124.914)
O4': (18.484,9.303,123.451)
C8: (21.229,8.966,124.494)
O2': (18.928,7.972,120.669)
C6: (24.013,10.969,123.871)
C5: (22.824,10.225,123.964)
C4: (21.896,10.343,122.958)
P: (18.506,7.884,127.305)
C4': (17.827,8.018,123.489)
C2': (19.612,7.900,121.903)
C2: (23.173,11.759,121.883)
N1: (24.175,11.751,122.791)
N3: (22.014,11.102,121.865)
N6: (24.969,10.929,124.795)
N7: (22.384,9.356,124.927)
N9: (20.840,9.537,123.323)
O5': (18.494,7.479,125.757)
O3': (18.275,5.911,122.261)
OP2: (19.907,7.895,127.814)
C3': (18.851,7.043,122.890)
C1': (19.583,9.270,122.567)
C5': (17.386,7.745,124.914)
O4': (18.484,9.303,123.451)
C8: (21.229,8.966,124.494)
O2': (18.928,7.972,120.669)
C6: (24.013,10.969,123.871)
C5: (22.824,10.225,123.964)
C4: (21.896,10.343,122.958)
P: (18.506,7.884,127.305)
C4': (17.827,8.018,123.489)
C2': (19.612,7.900,121.903)
C2: (23.173,11.759,121.883)
N1: (24.175,11.751,122.791)
N3: (22.014,11.102,121.865)
N6: (24.969,10.929,124.795)
N7: (22.384,9.356,124.927)
N9: (20.840,9.537,123.323)
O5': (18.494,7.479,125.757)
O3': (18.275,5.911,122.261)
OP1: (30.446,15.984,116.482)
OP2: (28.404,15.842,114.998)
C3': (27.153,13.491,119.411)
C1': (25.112,14.585,119.493)
C5': (28.458,15.610,118.797)
O6: (21.512,13.053,114.813)
O4': (26.113,15.558,119.357)
C8: (24.829,14.921,116.963)
C2: (21.605,12.383,118.328)
C6: (21.928,13.097,116.003)
C5: (23.067,13.771,116.563)
C4: (23.322,13.671,117.928)
P: (28.992,16.141,116.312)
C4': (27.397,14.962,119.647)
C2': (25.792,13.328,120.005)
O2': (25.895,13.445,121.402)
N1: (21.250,12.409,117.008)
N2: (20.812,11.683,119.131)
N3: (22.641,13.000,118.859)
N7: (24.046,14.563,115.960)
N9: (24.463,14.390,118.179)
O5': (28.236,15.341,117.430)
O3': (28.114,12.679,120.026)
OP2: (28.404,15.842,114.998)
C3': (27.153,13.491,119.411)
C1': (25.112,14.585,119.493)
C5': (28.458,15.610,118.797)
O6: (21.512,13.053,114.813)
O4': (26.113,15.558,119.357)
C8: (24.829,14.921,116.963)
C2: (21.605,12.383,118.328)
C6: (21.928,13.097,116.003)
C5: (23.067,13.771,116.563)
C4: (23.322,13.671,117.928)
P: (28.992,16.141,116.312)
C4': (27.397,14.962,119.647)
C2': (25.792,13.328,120.005)
O2': (25.895,13.445,121.402)
N1: (21.250,12.409,117.008)
N2: (20.812,11.683,119.131)
N3: (22.641,13.000,118.859)
N7: (24.046,14.563,115.960)
N9: (24.463,14.390,118.179)
O5': (28.236,15.341,117.430)
O3': (28.114,12.679,120.026)
Image (generated by PyMOL):