Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A102:A84
Extra
PDB:
ATOM 1 O3' U A 101 -12.504 -85.325 67.892 1.00 48.87 O
ATOM 2 P A A 102 -13.180 -86.591 67.224 1.00 0.01 P
ATOM 3 OP1 A A 102 -14.307 -86.979 68.113 1.00 0.01 O
ATOM 4 OP2 A A 102 -12.078 -87.569 66.975 1.00 0.01 O
ATOM 5 O5' A A 102 -13.741 -86.035 65.833 1.00 0.01 O
ATOM 6 C5' A A 102 -12.863 -85.516 64.848 1.00 0.01 C
ATOM 7 C4' A A 102 -13.103 -86.131 63.475 1.00 0.01 C
ATOM 8 O4' A A 102 -13.052 -87.581 63.546 1.00 0.01 O
ATOM 9 C3' A A 102 -14.443 -85.843 62.815 1.00 0.01 C
ATOM 10 O3' A A 102 -14.495 -84.565 62.210 1.00 0.01 O
ATOM 11 C2' A A 102 -14.563 -86.983 61.821 1.00 0.01 C
ATOM 12 O2' A A 102 -13.768 -86.737 60.676 1.00 0.01 O
ATOM 13 C1' A A 102 -13.938 -88.133 62.603 1.00 0.01 C
ATOM 14 N9 A A 102 -14.941 -88.898 63.333 1.00 0.01 N
ATOM 15 C8 A A 102 -14.964 -89.002 64.690 1.00 0.01 C
ATOM 16 N7 A A 102 -15.946 -89.750 65.113 1.00 0.01 N
ATOM 17 C5 A A 102 -16.603 -90.155 63.968 1.00 0.01 C
ATOM 18 C6 A A 102 -17.721 -90.948 63.785 1.00 0.01 C
ATOM 19 N6 A A 102 -18.392 -91.506 64.777 1.00 0.01 N
ATOM 20 N1 A A 102 -18.122 -91.171 62.539 1.00 0.01 N
ATOM 21 C2 A A 102 -17.419 -90.624 61.561 1.00 0.01 C
ATOM 22 N3 A A 102 -16.359 -89.850 61.612 1.00 0.01 N
ATOM 23 C4 A A 102 -15.989 -89.644 62.861 1.00 0.01 C
ATOM 24 P A A 103 -15.637 -83.521 62.642 1.00 5.28 P
ATOM 25 OP1 A A 103 -15.365 -82.256 61.909 1.00 5.28 O
ATOM 26 OP2 A A 103 -15.686 -83.501 64.111 1.00 5.28 O
ATOM 27 O5' A A 103 -16.945 -84.184 62.065 1.00 5.28 O
TER
ATOM 1 O3' A B 83 -18.225 -98.647 61.201 1.00 0.30 O
ATOM 2 P G B 84 -19.108 -99.102 59.934 1.00 0.01 P
ATOM 3 OP1 G B 84 -19.690-100.437 60.247 1.00 0.01 O
ATOM 4 OP2 G B 84 -18.251 -98.953 58.747 1.00 0.01 O
ATOM 5 O5' G B 84 -20.267 -98.033 59.871 1.00 0.01 O
ATOM 6 C5' G B 84 -20.224 -96.970 58.941 1.00 0.01 C
ATOM 7 C4' G B 84 -19.802 -95.714 59.623 1.00 0.01 C
ATOM 8 O4' G B 84 -18.418 -95.835 60.031 1.00 0.01 O
ATOM 9 C3' G B 84 -19.815 -94.455 58.789 1.00 0.01 C
ATOM 10 O3' G B 84 -21.099 -93.902 58.646 1.00 0.01 O
ATOM 11 C2' G B 84 -18.846 -93.567 59.552 1.00 0.01 C
ATOM 12 O2' G B 84 -19.441 -93.075 60.736 1.00 0.01 O
ATOM 13 C1' G B 84 -17.789 -94.578 59.947 1.00 0.01 C
ATOM 14 N9 G B 84 -16.719 -94.665 58.961 1.00 0.01 N
ATOM 15 C8 G B 84 -16.379 -95.694 58.144 1.00 0.01 C
ATOM 16 N7 G B 84 -15.329 -95.418 57.437 1.00 0.01 N
ATOM 17 C5 G B 84 -14.988 -94.146 57.829 1.00 0.01 C
ATOM 18 C6 G B 84 -13.947 -93.303 57.431 1.00 0.01 C
ATOM 19 O6 G B 84 -13.103 -93.540 56.593 1.00 0.01 O
ATOM 20 N1 G B 84 -13.938 -92.079 58.065 1.00 0.01 N
ATOM 21 C2 G B 84 -14.843 -91.713 59.008 1.00 0.01 C
ATOM 22 N2 G B 84 -14.714 -90.492 59.524 1.00 0.01 N
ATOM 23 N3 G B 84 -15.827 -92.491 59.413 1.00 0.01 N
ATOM 24 C4 G B 84 -15.833 -93.675 58.769 1.00 0.01 C
ATOM 25 P G B 85 -21.488 -93.156 57.284 1.00 9.10 P
ATOM 26 OP1 G B 85 -22.857 -92.575 57.490 1.00 9.10 O
ATOM 27 OP2 G B 85 -21.263 -94.123 56.161 1.00 9.10 O
ATOM 28 O5' G B 85 -20.407 -91.988 57.202 1.00 9.10 O
TER
ATOM 2 P A A 102 -13.180 -86.591 67.224 1.00 0.01 P
ATOM 3 OP1 A A 102 -14.307 -86.979 68.113 1.00 0.01 O
ATOM 4 OP2 A A 102 -12.078 -87.569 66.975 1.00 0.01 O
ATOM 5 O5' A A 102 -13.741 -86.035 65.833 1.00 0.01 O
ATOM 6 C5' A A 102 -12.863 -85.516 64.848 1.00 0.01 C
ATOM 7 C4' A A 102 -13.103 -86.131 63.475 1.00 0.01 C
ATOM 8 O4' A A 102 -13.052 -87.581 63.546 1.00 0.01 O
ATOM 9 C3' A A 102 -14.443 -85.843 62.815 1.00 0.01 C
ATOM 10 O3' A A 102 -14.495 -84.565 62.210 1.00 0.01 O
ATOM 11 C2' A A 102 -14.563 -86.983 61.821 1.00 0.01 C
ATOM 12 O2' A A 102 -13.768 -86.737 60.676 1.00 0.01 O
ATOM 13 C1' A A 102 -13.938 -88.133 62.603 1.00 0.01 C
ATOM 14 N9 A A 102 -14.941 -88.898 63.333 1.00 0.01 N
ATOM 15 C8 A A 102 -14.964 -89.002 64.690 1.00 0.01 C
ATOM 16 N7 A A 102 -15.946 -89.750 65.113 1.00 0.01 N
ATOM 17 C5 A A 102 -16.603 -90.155 63.968 1.00 0.01 C
ATOM 18 C6 A A 102 -17.721 -90.948 63.785 1.00 0.01 C
ATOM 19 N6 A A 102 -18.392 -91.506 64.777 1.00 0.01 N
ATOM 20 N1 A A 102 -18.122 -91.171 62.539 1.00 0.01 N
ATOM 21 C2 A A 102 -17.419 -90.624 61.561 1.00 0.01 C
ATOM 22 N3 A A 102 -16.359 -89.850 61.612 1.00 0.01 N
ATOM 23 C4 A A 102 -15.989 -89.644 62.861 1.00 0.01 C
ATOM 24 P A A 103 -15.637 -83.521 62.642 1.00 5.28 P
ATOM 25 OP1 A A 103 -15.365 -82.256 61.909 1.00 5.28 O
ATOM 26 OP2 A A 103 -15.686 -83.501 64.111 1.00 5.28 O
ATOM 27 O5' A A 103 -16.945 -84.184 62.065 1.00 5.28 O
TER
ATOM 1 O3' A B 83 -18.225 -98.647 61.201 1.00 0.30 O
ATOM 2 P G B 84 -19.108 -99.102 59.934 1.00 0.01 P
ATOM 3 OP1 G B 84 -19.690-100.437 60.247 1.00 0.01 O
ATOM 4 OP2 G B 84 -18.251 -98.953 58.747 1.00 0.01 O
ATOM 5 O5' G B 84 -20.267 -98.033 59.871 1.00 0.01 O
ATOM 6 C5' G B 84 -20.224 -96.970 58.941 1.00 0.01 C
ATOM 7 C4' G B 84 -19.802 -95.714 59.623 1.00 0.01 C
ATOM 8 O4' G B 84 -18.418 -95.835 60.031 1.00 0.01 O
ATOM 9 C3' G B 84 -19.815 -94.455 58.789 1.00 0.01 C
ATOM 10 O3' G B 84 -21.099 -93.902 58.646 1.00 0.01 O
ATOM 11 C2' G B 84 -18.846 -93.567 59.552 1.00 0.01 C
ATOM 12 O2' G B 84 -19.441 -93.075 60.736 1.00 0.01 O
ATOM 13 C1' G B 84 -17.789 -94.578 59.947 1.00 0.01 C
ATOM 14 N9 G B 84 -16.719 -94.665 58.961 1.00 0.01 N
ATOM 15 C8 G B 84 -16.379 -95.694 58.144 1.00 0.01 C
ATOM 16 N7 G B 84 -15.329 -95.418 57.437 1.00 0.01 N
ATOM 17 C5 G B 84 -14.988 -94.146 57.829 1.00 0.01 C
ATOM 18 C6 G B 84 -13.947 -93.303 57.431 1.00 0.01 C
ATOM 19 O6 G B 84 -13.103 -93.540 56.593 1.00 0.01 O
ATOM 20 N1 G B 84 -13.938 -92.079 58.065 1.00 0.01 N
ATOM 21 C2 G B 84 -14.843 -91.713 59.008 1.00 0.01 C
ATOM 22 N2 G B 84 -14.714 -90.492 59.524 1.00 0.01 N
ATOM 23 N3 G B 84 -15.827 -92.491 59.413 1.00 0.01 N
ATOM 24 C4 G B 84 -15.833 -93.675 58.769 1.00 0.01 C
ATOM 25 P G B 85 -21.488 -93.156 57.284 1.00 9.10 P
ATOM 26 OP1 G B 85 -22.857 -92.575 57.490 1.00 9.10 O
ATOM 27 OP2 G B 85 -21.263 -94.123 56.161 1.00 9.10 O
ATOM 28 O5' G B 85 -20.407 -91.988 57.202 1.00 9.10 O
TER
Atoms:
OP1: (-14.307,-86.979,68.113)
OP2: (-12.078,-87.569,66.975)
C3': (-14.443,-85.843,62.815)
C1': (-13.938,-88.133,62.603)
C5': (-12.863,-85.516,64.848)
O4': (-13.052,-87.581,63.546)
C8: (-14.964,-89.002,64.690)
O2': (-13.768,-86.737,60.676)
C6: (-17.721,-90.948,63.785)
C5: (-16.603,-90.155,63.968)
C4: (-15.989,-89.644,62.861)
P: (-13.180,-86.591,67.224)
C4': (-13.103,-86.131,63.475)
C2': (-14.563,-86.983,61.821)
C2: (-17.419,-90.624,61.561)
N1: (-18.122,-91.171,62.539)
N3: (-16.359,-89.850,61.612)
N6: (-18.392,-91.506,64.777)
N7: (-15.946,-89.750,65.113)
N9: (-14.941,-88.898,63.333)
O5': (-13.741,-86.035,65.833)
O3': (-14.495,-84.565,62.210)
OP2: (-12.078,-87.569,66.975)
C3': (-14.443,-85.843,62.815)
C1': (-13.938,-88.133,62.603)
C5': (-12.863,-85.516,64.848)
O4': (-13.052,-87.581,63.546)
C8: (-14.964,-89.002,64.690)
O2': (-13.768,-86.737,60.676)
C6: (-17.721,-90.948,63.785)
C5: (-16.603,-90.155,63.968)
C4: (-15.989,-89.644,62.861)
P: (-13.180,-86.591,67.224)
C4': (-13.103,-86.131,63.475)
C2': (-14.563,-86.983,61.821)
C2: (-17.419,-90.624,61.561)
N1: (-18.122,-91.171,62.539)
N3: (-16.359,-89.850,61.612)
N6: (-18.392,-91.506,64.777)
N7: (-15.946,-89.750,65.113)
N9: (-14.941,-88.898,63.333)
O5': (-13.741,-86.035,65.833)
O3': (-14.495,-84.565,62.210)
OP1: (-19.690,-100.437,60.247)
OP2: (-18.251,-98.953,58.747)
C3': (-19.815,-94.455,58.789)
C1': (-17.789,-94.578,59.947)
C5': (-20.224,-96.970,58.941)
O6: (-13.103,-93.540,56.593)
O4': (-18.418,-95.835,60.031)
C8: (-16.379,-95.694,58.144)
C2: (-14.843,-91.713,59.008)
C6: (-13.947,-93.303,57.431)
C5: (-14.988,-94.146,57.829)
C4: (-15.833,-93.675,58.769)
P: (-19.108,-99.102,59.934)
C4': (-19.802,-95.714,59.623)
C2': (-18.846,-93.567,59.552)
O2': (-19.441,-93.075,60.736)
N1: (-13.938,-92.079,58.065)
N2: (-14.714,-90.492,59.524)
N3: (-15.827,-92.491,59.413)
N7: (-15.329,-95.418,57.437)
N9: (-16.719,-94.665,58.961)
O5': (-20.267,-98.033,59.871)
O3': (-21.099,-93.902,58.646)
OP2: (-18.251,-98.953,58.747)
C3': (-19.815,-94.455,58.789)
C1': (-17.789,-94.578,59.947)
C5': (-20.224,-96.970,58.941)
O6: (-13.103,-93.540,56.593)
O4': (-18.418,-95.835,60.031)
C8: (-16.379,-95.694,58.144)
C2: (-14.843,-91.713,59.008)
C6: (-13.947,-93.303,57.431)
C5: (-14.988,-94.146,57.829)
C4: (-15.833,-93.675,58.769)
P: (-19.108,-99.102,59.934)
C4': (-19.802,-95.714,59.623)
C2': (-18.846,-93.567,59.552)
O2': (-19.441,-93.075,60.736)
N1: (-13.938,-92.079,58.065)
N2: (-14.714,-90.492,59.524)
N3: (-15.827,-92.491,59.413)
N7: (-15.329,-95.418,57.437)
N9: (-16.719,-94.665,58.961)
O5': (-20.267,-98.033,59.871)
O3': (-21.099,-93.902,58.646)
Image (generated by PyMOL):