Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OXM:A40:B83
Extra
PDB:
ATOM 1 O3' A A 39 -25.247 -48.655 16.551 1.00 57.51 O
ATOM 2 P A A 40 -26.531 -49.068 15.675 1.00 58.71 P
ATOM 3 OP1 A A 40 -27.401 -49.916 16.520 1.00 58.51 O
ATOM 4 OP2 A A 40 -26.087 -49.571 14.355 1.00 59.52 O
ATOM 5 O5' A A 40 -27.248 -47.658 15.452 1.00 57.81 O
ATOM 6 C5' A A 40 -27.689 -46.903 16.582 1.00 55.83 C
ATOM 7 C4' A A 40 -27.888 -45.445 16.217 1.00 54.85 C
ATOM 8 O4' A A 40 -26.622 -44.873 15.794 1.00 54.12 O
ATOM 9 C3' A A 40 -28.848 -45.203 15.059 1.00 55.22 C
ATOM 10 O3' A A 40 -30.188 -45.129 15.533 1.00 54.88 O
ATOM 11 C2' A A 40 -28.337 -43.874 14.507 1.00 54.96 C
ATOM 12 O2' A A 40 -28.834 -42.751 15.209 1.00 54.40 O
ATOM 13 C1' A A 40 -26.825 -44.011 14.688 1.00 54.40 C
ATOM 14 N9 A A 40 -26.150 -44.549 13.501 1.00 54.61 N
ATOM 15 C8 A A 40 -25.963 -45.866 13.182 1.00 54.83 C
ATOM 16 N7 A A 40 -25.328 -46.058 12.052 1.00 55.69 N
ATOM 17 C5 A A 40 -25.079 -44.780 11.587 1.00 55.57 C
ATOM 18 C6 A A 40 -24.434 -44.297 10.423 1.00 56.36 C
ATOM 19 N6 A A 40 -23.904 -45.098 9.492 1.00 57.02 N
ATOM 20 N1 A A 40 -24.347 -42.955 10.257 1.00 56.12 N
ATOM 21 C2 A A 40 -24.878 -42.151 11.194 1.00 55.21 C
ATOM 22 N3 A A 40 -25.506 -42.491 12.323 1.00 54.51 N
ATOM 23 C4 A A 40 -25.579 -43.832 12.467 1.00 54.81 C
ATOM 24 P G A 41 -31.422 -45.691 14.672 1.00 56.15 P
ATOM 25 OP1 G A 41 -32.650 -45.429 15.455 1.00 56.06 O
ATOM 26 OP2 G A 41 -31.131 -47.076 14.244 1.00 56.52 O
ATOM 27 O5' G A 41 -31.425 -44.749 13.376 1.00 56.79 O
TER
ATOM 1 O3' A B 82 -16.843 -37.683 9.001 1.00 55.85 O
ATOM 2 P G B 83 -17.745 -36.950 7.896 1.00 56.92 P
ATOM 3 OP1 G B 83 -17.068 -37.123 6.591 1.00 57.36 O
ATOM 4 OP2 G B 83 -18.074 -35.580 8.352 1.00 56.81 O
ATOM 5 O5' G B 83 -19.081 -37.832 7.927 1.00 57.18 O
ATOM 6 C5' G B 83 -19.027 -39.221 7.634 1.00 57.21 C
ATOM 7 C4' G B 83 -20.177 -39.974 8.280 1.00 58.32 C
ATOM 8 O4' G B 83 -20.048 -39.947 9.726 1.00 58.05 O
ATOM 9 C3' G B 83 -21.577 -39.419 8.055 1.00 59.41 C
ATOM 10 O3' G B 83 -22.065 -39.731 6.760 1.00 60.57 O
ATOM 11 C2' G B 83 -22.338 -40.131 9.171 1.00 59.06 C
ATOM 12 O2' G B 83 -22.576 -41.503 8.916 1.00 59.09 O
ATOM 13 C1' G B 83 -21.341 -39.966 10.315 1.00 57.91 C
ATOM 14 N9 G B 83 -21.568 -38.739 11.082 1.00 57.30 N
ATOM 15 C8 G B 83 -20.850 -37.564 11.030 1.00 57.02 C
ATOM 16 N7 G B 83 -21.299 -36.639 11.835 1.00 56.89 N
ATOM 17 C5 G B 83 -22.389 -37.235 12.462 1.00 56.72 C
ATOM 18 C6 G B 83 -23.282 -36.725 13.439 1.00 56.43 C
ATOM 19 O6 G B 83 -23.281 -35.601 13.962 1.00 56.50 O
ATOM 20 N1 G B 83 -24.252 -37.659 13.805 1.00 56.17 N
ATOM 21 C2 G B 83 -24.345 -38.931 13.288 1.00 56.32 C
ATOM 22 N2 G B 83 -25.337 -39.703 13.750 1.00 56.48 N
ATOM 23 N3 G B 83 -23.517 -39.420 12.376 1.00 56.67 N
ATOM 24 C4 G B 83 -22.566 -38.525 12.008 1.00 56.94 C
ATOM 25 P A B 84 -22.969 -38.660 5.982 1.00 61.80 P
ATOM 26 OP1 A B 84 -23.118 -39.152 4.595 1.00 62.70 O
ATOM 27 OP2 A B 84 -22.449 -37.295 6.229 1.00 61.07 O
ATOM 28 O5' A B 84 -24.375 -38.777 6.731 1.00 62.65 O
TER
ATOM 2 P A A 40 -26.531 -49.068 15.675 1.00 58.71 P
ATOM 3 OP1 A A 40 -27.401 -49.916 16.520 1.00 58.51 O
ATOM 4 OP2 A A 40 -26.087 -49.571 14.355 1.00 59.52 O
ATOM 5 O5' A A 40 -27.248 -47.658 15.452 1.00 57.81 O
ATOM 6 C5' A A 40 -27.689 -46.903 16.582 1.00 55.83 C
ATOM 7 C4' A A 40 -27.888 -45.445 16.217 1.00 54.85 C
ATOM 8 O4' A A 40 -26.622 -44.873 15.794 1.00 54.12 O
ATOM 9 C3' A A 40 -28.848 -45.203 15.059 1.00 55.22 C
ATOM 10 O3' A A 40 -30.188 -45.129 15.533 1.00 54.88 O
ATOM 11 C2' A A 40 -28.337 -43.874 14.507 1.00 54.96 C
ATOM 12 O2' A A 40 -28.834 -42.751 15.209 1.00 54.40 O
ATOM 13 C1' A A 40 -26.825 -44.011 14.688 1.00 54.40 C
ATOM 14 N9 A A 40 -26.150 -44.549 13.501 1.00 54.61 N
ATOM 15 C8 A A 40 -25.963 -45.866 13.182 1.00 54.83 C
ATOM 16 N7 A A 40 -25.328 -46.058 12.052 1.00 55.69 N
ATOM 17 C5 A A 40 -25.079 -44.780 11.587 1.00 55.57 C
ATOM 18 C6 A A 40 -24.434 -44.297 10.423 1.00 56.36 C
ATOM 19 N6 A A 40 -23.904 -45.098 9.492 1.00 57.02 N
ATOM 20 N1 A A 40 -24.347 -42.955 10.257 1.00 56.12 N
ATOM 21 C2 A A 40 -24.878 -42.151 11.194 1.00 55.21 C
ATOM 22 N3 A A 40 -25.506 -42.491 12.323 1.00 54.51 N
ATOM 23 C4 A A 40 -25.579 -43.832 12.467 1.00 54.81 C
ATOM 24 P G A 41 -31.422 -45.691 14.672 1.00 56.15 P
ATOM 25 OP1 G A 41 -32.650 -45.429 15.455 1.00 56.06 O
ATOM 26 OP2 G A 41 -31.131 -47.076 14.244 1.00 56.52 O
ATOM 27 O5' G A 41 -31.425 -44.749 13.376 1.00 56.79 O
TER
ATOM 1 O3' A B 82 -16.843 -37.683 9.001 1.00 55.85 O
ATOM 2 P G B 83 -17.745 -36.950 7.896 1.00 56.92 P
ATOM 3 OP1 G B 83 -17.068 -37.123 6.591 1.00 57.36 O
ATOM 4 OP2 G B 83 -18.074 -35.580 8.352 1.00 56.81 O
ATOM 5 O5' G B 83 -19.081 -37.832 7.927 1.00 57.18 O
ATOM 6 C5' G B 83 -19.027 -39.221 7.634 1.00 57.21 C
ATOM 7 C4' G B 83 -20.177 -39.974 8.280 1.00 58.32 C
ATOM 8 O4' G B 83 -20.048 -39.947 9.726 1.00 58.05 O
ATOM 9 C3' G B 83 -21.577 -39.419 8.055 1.00 59.41 C
ATOM 10 O3' G B 83 -22.065 -39.731 6.760 1.00 60.57 O
ATOM 11 C2' G B 83 -22.338 -40.131 9.171 1.00 59.06 C
ATOM 12 O2' G B 83 -22.576 -41.503 8.916 1.00 59.09 O
ATOM 13 C1' G B 83 -21.341 -39.966 10.315 1.00 57.91 C
ATOM 14 N9 G B 83 -21.568 -38.739 11.082 1.00 57.30 N
ATOM 15 C8 G B 83 -20.850 -37.564 11.030 1.00 57.02 C
ATOM 16 N7 G B 83 -21.299 -36.639 11.835 1.00 56.89 N
ATOM 17 C5 G B 83 -22.389 -37.235 12.462 1.00 56.72 C
ATOM 18 C6 G B 83 -23.282 -36.725 13.439 1.00 56.43 C
ATOM 19 O6 G B 83 -23.281 -35.601 13.962 1.00 56.50 O
ATOM 20 N1 G B 83 -24.252 -37.659 13.805 1.00 56.17 N
ATOM 21 C2 G B 83 -24.345 -38.931 13.288 1.00 56.32 C
ATOM 22 N2 G B 83 -25.337 -39.703 13.750 1.00 56.48 N
ATOM 23 N3 G B 83 -23.517 -39.420 12.376 1.00 56.67 N
ATOM 24 C4 G B 83 -22.566 -38.525 12.008 1.00 56.94 C
ATOM 25 P A B 84 -22.969 -38.660 5.982 1.00 61.80 P
ATOM 26 OP1 A B 84 -23.118 -39.152 4.595 1.00 62.70 O
ATOM 27 OP2 A B 84 -22.449 -37.295 6.229 1.00 61.07 O
ATOM 28 O5' A B 84 -24.375 -38.777 6.731 1.00 62.65 O
TER
Atoms:
OP1: (-27.401,-49.916,16.520)
OP2: (-26.087,-49.571,14.355)
C3': (-28.848,-45.203,15.059)
C1': (-26.825,-44.011,14.688)
C5': (-27.689,-46.903,16.582)
O4': (-26.622,-44.873,15.794)
C8: (-25.963,-45.866,13.182)
O2': (-28.834,-42.751,15.209)
C6: (-24.434,-44.297,10.423)
C5: (-25.079,-44.780,11.587)
C4: (-25.579,-43.832,12.467)
P: (-26.531,-49.068,15.675)
C4': (-27.888,-45.445,16.217)
C2': (-28.337,-43.874,14.507)
C2: (-24.878,-42.151,11.194)
N1: (-24.347,-42.955,10.257)
N3: (-25.506,-42.491,12.323)
N6: (-23.904,-45.098,9.492)
N7: (-25.328,-46.058,12.052)
N9: (-26.150,-44.549,13.501)
O5': (-27.248,-47.658,15.452)
O3': (-30.188,-45.129,15.533)
OP2: (-26.087,-49.571,14.355)
C3': (-28.848,-45.203,15.059)
C1': (-26.825,-44.011,14.688)
C5': (-27.689,-46.903,16.582)
O4': (-26.622,-44.873,15.794)
C8: (-25.963,-45.866,13.182)
O2': (-28.834,-42.751,15.209)
C6: (-24.434,-44.297,10.423)
C5: (-25.079,-44.780,11.587)
C4: (-25.579,-43.832,12.467)
P: (-26.531,-49.068,15.675)
C4': (-27.888,-45.445,16.217)
C2': (-28.337,-43.874,14.507)
C2: (-24.878,-42.151,11.194)
N1: (-24.347,-42.955,10.257)
N3: (-25.506,-42.491,12.323)
N6: (-23.904,-45.098,9.492)
N7: (-25.328,-46.058,12.052)
N9: (-26.150,-44.549,13.501)
O5': (-27.248,-47.658,15.452)
O3': (-30.188,-45.129,15.533)
OP1: (-17.068,-37.123,6.591)
OP2: (-18.074,-35.580,8.352)
C3': (-21.577,-39.419,8.055)
C1': (-21.341,-39.966,10.315)
C5': (-19.027,-39.221,7.634)
O6: (-23.281,-35.601,13.962)
O4': (-20.048,-39.947,9.726)
C8: (-20.850,-37.564,11.030)
C2: (-24.345,-38.931,13.288)
C6: (-23.282,-36.725,13.439)
C5: (-22.389,-37.235,12.462)
C4: (-22.566,-38.525,12.008)
P: (-17.745,-36.950,7.896)
C4': (-20.177,-39.974,8.280)
C2': (-22.338,-40.131,9.171)
O2': (-22.576,-41.503,8.916)
N1: (-24.252,-37.659,13.805)
N2: (-25.337,-39.703,13.750)
N3: (-23.517,-39.420,12.376)
N7: (-21.299,-36.639,11.835)
N9: (-21.568,-38.739,11.082)
O5': (-19.081,-37.832,7.927)
O3': (-22.065,-39.731,6.760)
OP2: (-18.074,-35.580,8.352)
C3': (-21.577,-39.419,8.055)
C1': (-21.341,-39.966,10.315)
C5': (-19.027,-39.221,7.634)
O6: (-23.281,-35.601,13.962)
O4': (-20.048,-39.947,9.726)
C8: (-20.850,-37.564,11.030)
C2: (-24.345,-38.931,13.288)
C6: (-23.282,-36.725,13.439)
C5: (-22.389,-37.235,12.462)
C4: (-22.566,-38.525,12.008)
P: (-17.745,-36.950,7.896)
C4': (-20.177,-39.974,8.280)
C2': (-22.338,-40.131,9.171)
O2': (-22.576,-41.503,8.916)
N1: (-24.252,-37.659,13.805)
N2: (-25.337,-39.703,13.750)
N3: (-23.517,-39.420,12.376)
N7: (-21.299,-36.639,11.835)
N9: (-21.568,-38.739,11.082)
O5': (-19.081,-37.832,7.927)
O3': (-22.065,-39.731,6.760)
Image (generated by PyMOL):