ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1KD1:A1289:A1259

Extra

PDB:
ATOM 1 O3' A A1288 21.168 114.487 77.402 1.00 33.94 O
ATOM 2 P A A1289 21.229 115.786 76.441 1.00 32.83 P
ATOM 3 OP1 A A1289 22.043 116.814 77.132 1.00 31.27 O
ATOM 4 OP2 A A1289 19.855 116.115 76.036 1.00 34.06 O
ATOM 5 O5' A A1289 22.072 115.309 75.181 1.00 30.02 O
ATOM 6 C5' A A1289 23.494 115.479 75.149 1.00 31.15 C
ATOM 7 C4' A A1289 24.071 114.747 73.977 1.00 32.36 C
ATOM 8 O4' A A1289 23.508 113.418 73.957 1.00 31.83 O
ATOM 9 C3' A A1289 23.741 115.304 72.604 1.00 32.13 C
ATOM 10 O3' A A1289 24.661 116.298 72.205 1.00 30.25 O
ATOM 11 C2' A A1289 23.946 114.095 71.725 1.00 33.54 C
ATOM 12 O2' A A1289 25.322 113.889 71.487 1.00 35.00 O
ATOM 13 C1' A A1289 23.397 112.982 72.616 1.00 33.55 C
ATOM 14 N9 A A1289 21.996 112.683 72.330 1.00 34.03 N
ATOM 15 C8 A A1289 20.897 113.451 72.599 1.00 34.26 C
ATOM 16 N7 A A1289 19.770 112.906 72.224 1.00 34.68 N
ATOM 17 C5 A A1289 20.153 111.694 71.670 1.00 34.76 C
ATOM 18 C6 A A1289 19.414 110.639 71.092 1.00 34.81 C
ATOM 19 N6 A A1289 18.083 110.634 70.976 1.00 36.65 N
ATOM 20 N1 A A1289 20.096 109.577 70.636 1.00 34.16 N
ATOM 21 C2 A A1289 21.422 109.582 70.749 1.00 34.03 C
ATOM 22 N3 A A1289 22.226 110.507 71.267 1.00 34.25 N
ATOM 23 C4 A A1289 21.519 111.549 71.721 1.00 33.91 C
ATOM 24 P A A1290 24.269 117.829 72.355 1.00 34.66 P
ATOM 25 OP1 A A1290 25.385 118.639 71.842 1.00 34.56 O
ATOM 26 OP2 A A1290 23.808 117.997 73.741 1.00 34.71 O
ATOM 27 O5' A A1290 22.995 118.058 71.424 1.00 37.54 O
TER

ATOM 1 O3' G B1258 21.099 101.534 64.895 1.00 42.48 O
ATOM 2 P G B1259 21.423 102.837 64.013 1.00 43.85 P
ATOM 3 OP1 G B1259 20.297 102.993 63.081 1.00 45.46 O
ATOM 4 OP2 G B1259 22.811 102.761 63.479 1.00 45.33 O
ATOM 5 O5' G B1259 21.307 104.045 65.041 1.00 41.59 O
ATOM 6 C5' G B1259 20.028 104.513 65.443 1.00 39.49 C
ATOM 7 C4' G B1259 20.156 105.482 66.578 1.00 40.60 C
ATOM 8 O4' G B1259 21.167 104.996 67.495 1.00 39.49 O
ATOM 9 C3' G B1259 20.633 106.873 66.212 1.00 40.35 C
ATOM 10 O3' G B1259 19.523 107.669 65.750 1.00 42.58 O
ATOM 11 C2' G B1259 21.139 107.358 67.560 1.00 40.52 C
ATOM 12 O2' G B1259 20.048 107.695 68.387 1.00 39.11 O
ATOM 13 C1' G B1259 21.816 106.094 68.111 1.00 40.31 C
ATOM 14 N9 G B1259 23.246 106.058 67.788 1.00 40.85 N
ATOM 15 C8 G B1259 23.919 105.177 66.973 1.00 39.47 C
ATOM 16 N7 G B1259 25.160 105.518 66.767 1.00 39.11 N
ATOM 17 C5 G B1259 25.322 106.675 67.514 1.00 39.46 C
ATOM 18 C6 G B1259 26.429 107.541 67.641 1.00 39.43 C
ATOM 19 O6 G B1259 27.511 107.495 67.066 1.00 39.41 O
ATOM 20 N1 G B1259 26.167 108.573 68.525 1.00 39.46 N
ATOM 21 C2 G B1259 24.979 108.766 69.181 1.00 40.97 C
ATOM 22 N2 G B1259 24.926 109.800 70.022 1.00 41.62 N
ATOM 23 N3 G B1259 23.925 107.999 69.033 1.00 40.71 N
ATOM 24 C4 G B1259 24.166 106.981 68.194 1.00 40.37 C
ATOM 25 P C B1260 19.774 109.014 64.889 1.00 44.04 P
ATOM 26 OP1 C B1260 18.461 109.537 64.446 1.00 44.60 O
ATOM 27 OP2 C B1260 20.823 108.728 63.888 1.00 43.51 O
ATOM 28 O5' C B1260 20.350 110.074 65.925 1.00 41.54 O
TER

Atoms:
OP1: (22.043,116.814,77.132)
OP2: (19.855,116.115,76.036)
C3': (23.741,115.304,72.604)
C1': (23.397,112.982,72.616)
C5': (23.494,115.479,75.149)
O4': (23.508,113.418,73.957)
C8: (20.897,113.451,72.599)
O2': (25.322,113.889,71.487)
C6: (19.414,110.639,71.092)
C5: (20.153,111.694,71.670)
C4: (21.519,111.549,71.721)
P: (21.229,115.786,76.441)
C4': (24.071,114.747,73.977)
C2': (23.946,114.095,71.725)
C2: (21.422,109.582,70.749)
N1: (20.096,109.577,70.636)
N3: (22.226,110.507,71.267)
N6: (18.083,110.634,70.976)
N7: (19.770,112.906,72.224)
N9: (21.996,112.683,72.330)
O5': (22.072,115.309,75.181)
O3': (24.661,116.298,72.205)
OP1: (20.297,102.993,63.081)
OP2: (22.811,102.761,63.479)
C3': (20.633,106.873,66.212)
C1': (21.816,106.094,68.111)
C5': (20.028,104.513,65.443)
O6: (27.511,107.495,67.066)
O4': (21.167,104.996,67.495)
C8: (23.919,105.177,66.973)
C2: (24.979,108.766,69.181)
C6: (26.429,107.541,67.641)
C5: (25.322,106.675,67.514)
C4: (24.166,106.981,68.194)
P: (21.423,102.837,64.013)
C4': (20.156,105.482,66.578)
C2': (21.139,107.358,67.560)
O2': (20.048,107.695,68.387)
N1: (26.167,108.573,68.525)
N2: (24.926,109.800,70.022)
N3: (23.925,107.999,69.033)
N7: (25.160,105.518,66.767)
N9: (23.246,106.058,67.788)
O5': (21.307,104.045,65.041)
O3': (19.523,107.669,65.750)
Image (generated by PyMOL):
PyMOL image
show in jmol