ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OWI:B10:B72

Extra

PDB:
ATOM 1 O3' G A 9 -2.879 -41.536 28.304 1.00 52.26 O
ATOM 2 P A A 10 -2.914 -42.802 29.287 1.00 53.42 P
ATOM 3 OP1 A A 10 -1.795 -43.690 28.891 1.00 53.13 O
ATOM 4 OP2 A A 10 -4.293 -43.346 29.382 1.00 52.80 O
ATOM 5 O5' A A 10 -2.545 -42.131 30.689 1.00 53.67 O
ATOM 6 C5' A A 10 -1.356 -41.349 30.800 1.00 54.22 C
ATOM 7 C4' A A 10 -1.600 -40.130 31.665 1.00 54.68 C
ATOM 8 O4' A A 10 -2.599 -39.280 31.052 1.00 54.80 O
ATOM 9 C3' A A 10 -2.166 -40.460 33.035 1.00 55.14 C
ATOM 10 O3' A A 10 -1.096 -40.748 33.916 1.00 55.92 O
ATOM 11 C2' A A 10 -2.935 -39.191 33.404 1.00 55.02 C
ATOM 12 O2' A A 10 -2.130 -38.212 34.033 1.00 55.39 O
ATOM 13 C1' A A 10 -3.416 -38.688 32.045 1.00 54.24 C
ATOM 14 N9 A A 10 -4.809 -39.005 31.730 1.00 53.02 N
ATOM 15 C8 A A 10 -5.367 -40.244 31.590 1.00 52.83 C
ATOM 16 N7 A A 10 -6.646 -40.222 31.299 1.00 52.52 N
ATOM 17 C5 A A 10 -6.946 -38.873 31.242 1.00 51.90 C
ATOM 18 C6 A A 10 -8.141 -38.177 30.971 1.00 51.83 C
ATOM 19 N6 A A 10 -9.304 -38.778 30.702 1.00 51.82 N
ATOM 20 N1 A A 10 -8.096 -36.829 30.991 1.00 51.83 N
ATOM 21 C2 A A 10 -6.936 -36.217 31.262 1.00 51.49 C
ATOM 22 N3 A A 10 -5.755 -36.765 31.529 1.00 51.66 N
ATOM 23 C4 A A 10 -5.827 -38.107 31.504 1.00 52.06 C
ATOM 24 P G A 11 -1.323 -41.734 35.158 1.00 57.68 P
ATOM 25 OP1 G A 11 0.020 -42.040 35.709 1.00 57.99 O
ATOM 26 OP2 G A 11 -2.226 -42.849 34.773 1.00 56.70 O
ATOM 27 O5' G A 11 -2.082 -40.757 36.179 1.00 57.58 O
TER

ATOM 1 O3' G B 71 -12.972 -29.008 33.582 1.00 59.89 O
ATOM 2 P G B 72 -12.776 -29.982 34.843 1.00 59.67 P
ATOM 3 OP1 G B 72 -14.124 -30.330 35.341 1.00 60.29 O
ATOM 4 OP2 G B 72 -11.765 -29.413 35.765 1.00 58.99 O
ATOM 5 O5' G B 72 -12.121 -31.283 34.195 1.00 59.40 O
ATOM 6 C5' G B 72 -12.728 -32.015 33.134 1.00 58.80 C
ATOM 7 C4' G B 72 -11.672 -32.920 32.527 1.00 58.40 C
ATOM 8 O4' G B 72 -10.505 -32.127 32.190 1.00 57.88 O
ATOM 9 C3' G B 72 -11.106 -33.974 33.466 1.00 58.19 C
ATOM 10 O3' G B 72 -11.923 -35.131 33.495 1.00 59.66 O
ATOM 11 C2' G B 72 -9.779 -34.278 32.797 1.00 57.17 C
ATOM 12 O2' G B 72 -9.963 -35.055 31.633 1.00 57.28 O
ATOM 13 C1' G B 72 -9.326 -32.894 32.375 1.00 56.87 C
ATOM 14 N9 G B 72 -8.391 -32.207 33.277 1.00 56.05 N
ATOM 15 C8 G B 72 -8.610 -31.039 33.970 1.00 56.04 C
ATOM 16 N7 G B 72 -7.587 -30.644 34.679 1.00 55.63 N
ATOM 17 C5 G B 72 -6.619 -31.606 34.442 1.00 55.17 C
ATOM 18 C6 G B 72 -5.294 -31.713 34.936 1.00 55.15 C
ATOM 19 O6 G B 72 -4.696 -30.955 35.709 1.00 55.45 O
ATOM 20 N1 G B 72 -4.636 -32.842 34.450 1.00 54.84 N
ATOM 21 C2 G B 72 -5.196 -33.755 33.589 1.00 54.49 C
ATOM 22 N2 G B 72 -4.419 -34.784 33.232 1.00 53.96 N
ATOM 23 N3 G B 72 -6.435 -33.665 33.117 1.00 54.67 N
ATOM 24 C4 G B 72 -7.093 -32.571 33.579 1.00 55.21 C
ATOM 25 P C B 73 -12.014 -36.017 34.825 1.00 60.43 P
ATOM 26 OP1 C B 73 -13.439 -36.349 35.006 1.00 61.73 O
ATOM 27 OP2 C B 73 -11.261 -35.324 35.892 1.00 60.88 O
ATOM 28 O5' C B 73 -11.300 -37.411 34.497 1.00 61.31 O
TER

Atoms:
OP1: (-1.795,-43.690,28.891)
OP2: (-4.293,-43.346,29.382)
C3': (-2.166,-40.460,33.035)
C1': (-3.416,-38.688,32.045)
C5': (-1.356,-41.349,30.800)
O4': (-2.599,-39.280,31.052)
C8: (-5.367,-40.244,31.590)
O2': (-2.130,-38.212,34.033)
C6: (-8.141,-38.177,30.971)
C5: (-6.946,-38.873,31.242)
C4: (-5.827,-38.107,31.504)
P: (-2.914,-42.802,29.287)
C4': (-1.600,-40.130,31.665)
C2': (-2.935,-39.191,33.404)
C2: (-6.936,-36.217,31.262)
N1: (-8.096,-36.829,30.991)
N3: (-5.755,-36.765,31.529)
N6: (-9.304,-38.778,30.702)
N7: (-6.646,-40.222,31.299)
N9: (-4.809,-39.005,31.730)
O5': (-2.545,-42.131,30.689)
O3': (-1.096,-40.748,33.916)
OP1: (-14.124,-30.330,35.341)
OP2: (-11.765,-29.413,35.765)
C3': (-11.106,-33.974,33.466)
C1': (-9.326,-32.894,32.375)
C5': (-12.728,-32.015,33.134)
O6: (-4.696,-30.955,35.709)
O4': (-10.505,-32.127,32.190)
C8: (-8.610,-31.039,33.970)
C2: (-5.196,-33.755,33.589)
C6: (-5.294,-31.713,34.936)
C5: (-6.619,-31.606,34.442)
C4: (-7.093,-32.571,33.579)
P: (-12.776,-29.982,34.843)
C4': (-11.672,-32.920,32.527)
C2': (-9.779,-34.278,32.797)
O2': (-9.963,-35.055,31.633)
N1: (-4.636,-32.842,34.450)
N2: (-4.419,-34.784,33.232)
N3: (-6.435,-33.665,33.117)
N7: (-7.587,-30.644,34.679)
N9: (-8.391,-32.207,33.277)
O5': (-12.121,-31.283,34.195)
O3': (-11.923,-35.131,33.495)
Image (generated by PyMOL):
PyMOL image
show in jmol