Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01066:01059
Extra
PDB:
ATOM 1 O3' A A1065 12.575 108.672 116.771 1.00 45.84 O
ATOM 2 P A A1066 12.304 109.067 118.292 1.00 47.56 P
ATOM 3 OP1 A A1066 10.908 109.541 118.371 1.00 48.46 O
ATOM 4 OP2 A A1066 13.403 109.945 118.774 1.00 45.86 O
ATOM 5 O5' A A1066 12.376 107.660 119.015 1.00 45.06 O
ATOM 6 C5' A A1066 11.490 106.610 118.613 1.00 45.36 C
ATOM 7 C4' A A1066 12.130 105.279 118.864 1.00 46.76 C
ATOM 8 O4' A A1066 13.343 105.185 118.072 1.00 48.24 O
ATOM 9 C3' A A1066 12.590 105.047 120.294 1.00 45.58 C
ATOM 10 O3' A A1066 11.513 104.591 121.106 1.00 44.95 O
ATOM 11 C2' A A1066 13.666 103.984 120.101 1.00 47.59 C
ATOM 12 O2' A A1066 13.142 102.680 119.909 1.00 48.42 O
ATOM 13 C1' A A1066 14.320 104.455 118.795 1.00 47.75 C
ATOM 14 N9 A A1066 15.472 105.332 119.010 1.00 46.79 N
ATOM 15 C8 A A1066 15.492 106.553 119.637 1.00 46.27 C
ATOM 16 N7 A A1066 16.675 107.106 119.673 1.00 47.02 N
ATOM 17 C5 A A1066 17.493 106.187 119.028 1.00 45.77 C
ATOM 18 C6 A A1066 18.866 106.187 118.730 1.00 44.37 C
ATOM 19 N6 A A1066 19.702 107.176 119.067 1.00 41.80 N
ATOM 20 N1 A A1066 19.360 105.122 118.067 1.00 43.23 N
ATOM 21 C2 A A1066 18.534 104.131 117.740 1.00 43.25 C
ATOM 22 N3 A A1066 17.234 104.014 117.967 1.00 45.67 N
ATOM 23 C4 A A1066 16.766 105.090 118.618 1.00 45.34 C
ATOM 24 P G A1067 11.018 105.463 122.368 1.00 45.20 P
ATOM 25 OP1 G A1067 9.904 104.670 122.946 1.00 45.06 O
ATOM 26 OP2 G A1067 10.800 106.891 122.001 1.00 42.20 O
ATOM 27 O5' G A1067 12.214 105.405 123.411 1.00 43.34 O
TER
ATOM 1 O3' G B1058 26.952 99.713 116.968 1.00 46.41 O
ATOM 2 P G B1059 26.567 99.597 118.521 1.00 50.98 P
ATOM 3 OP1 G B1059 27.707 100.179 119.273 1.00 50.78 O
ATOM 4 OP2 G B1059 26.130 98.198 118.815 1.00 48.83 O
ATOM 5 O5' G B1059 25.308 100.560 118.696 1.00 48.38 O
ATOM 6 C5' G B1059 25.444 101.980 118.531 1.00 47.77 C
ATOM 7 C4' G B1059 24.085 102.645 118.383 1.00 48.34 C
ATOM 8 O4' G B1059 23.329 101.995 117.319 1.00 46.93 O
ATOM 9 C3' G B1059 23.124 102.621 119.568 1.00 46.80 C
ATOM 10 O3' G B1059 23.401 103.621 120.545 1.00 45.12 O
ATOM 11 C2' G B1059 21.812 102.923 118.867 1.00 47.52 C
ATOM 12 O2' G B1059 21.776 104.278 118.465 1.00 47.30 O
ATOM 13 C1' G B1059 21.944 102.042 117.626 1.00 46.75 C
ATOM 14 N9 G B1059 21.480 100.679 117.886 1.00 46.41 N
ATOM 15 C8 G B1059 22.236 99.532 117.908 1.00 45.67 C
ATOM 16 N7 G B1059 21.537 98.461 118.170 1.00 46.40 N
ATOM 17 C5 G B1059 20.238 98.926 118.328 1.00 46.72 C
ATOM 18 C6 G B1059 19.033 98.223 118.614 1.00 44.68 C
ATOM 19 O6 G B1059 18.869 97.016 118.765 1.00 43.78 O
ATOM 20 N1 G B1059 17.948 99.083 118.709 1.00 43.38 N
ATOM 21 C2 G B1059 18.002 100.440 118.536 1.00 45.59 C
ATOM 22 N2 G B1059 16.849 101.101 118.679 1.00 44.79 N
ATOM 23 N3 G B1059 19.110 101.107 118.247 1.00 48.08 N
ATOM 24 C4 G B1059 20.184 100.292 118.162 1.00 47.51 C
ATOM 25 P U B1060 22.819 103.464 122.039 1.00 46.06 P
ATOM 26 OP1 U B1060 23.389 104.564 122.837 1.00 47.61 O
ATOM 27 OP2 U B1060 22.995 102.065 122.498 1.00 46.06 O
ATOM 28 O5' U B1060 21.252 103.720 121.896 1.00 49.16 O
TER
ATOM 2 P A A1066 12.304 109.067 118.292 1.00 47.56 P
ATOM 3 OP1 A A1066 10.908 109.541 118.371 1.00 48.46 O
ATOM 4 OP2 A A1066 13.403 109.945 118.774 1.00 45.86 O
ATOM 5 O5' A A1066 12.376 107.660 119.015 1.00 45.06 O
ATOM 6 C5' A A1066 11.490 106.610 118.613 1.00 45.36 C
ATOM 7 C4' A A1066 12.130 105.279 118.864 1.00 46.76 C
ATOM 8 O4' A A1066 13.343 105.185 118.072 1.00 48.24 O
ATOM 9 C3' A A1066 12.590 105.047 120.294 1.00 45.58 C
ATOM 10 O3' A A1066 11.513 104.591 121.106 1.00 44.95 O
ATOM 11 C2' A A1066 13.666 103.984 120.101 1.00 47.59 C
ATOM 12 O2' A A1066 13.142 102.680 119.909 1.00 48.42 O
ATOM 13 C1' A A1066 14.320 104.455 118.795 1.00 47.75 C
ATOM 14 N9 A A1066 15.472 105.332 119.010 1.00 46.79 N
ATOM 15 C8 A A1066 15.492 106.553 119.637 1.00 46.27 C
ATOM 16 N7 A A1066 16.675 107.106 119.673 1.00 47.02 N
ATOM 17 C5 A A1066 17.493 106.187 119.028 1.00 45.77 C
ATOM 18 C6 A A1066 18.866 106.187 118.730 1.00 44.37 C
ATOM 19 N6 A A1066 19.702 107.176 119.067 1.00 41.80 N
ATOM 20 N1 A A1066 19.360 105.122 118.067 1.00 43.23 N
ATOM 21 C2 A A1066 18.534 104.131 117.740 1.00 43.25 C
ATOM 22 N3 A A1066 17.234 104.014 117.967 1.00 45.67 N
ATOM 23 C4 A A1066 16.766 105.090 118.618 1.00 45.34 C
ATOM 24 P G A1067 11.018 105.463 122.368 1.00 45.20 P
ATOM 25 OP1 G A1067 9.904 104.670 122.946 1.00 45.06 O
ATOM 26 OP2 G A1067 10.800 106.891 122.001 1.00 42.20 O
ATOM 27 O5' G A1067 12.214 105.405 123.411 1.00 43.34 O
TER
ATOM 1 O3' G B1058 26.952 99.713 116.968 1.00 46.41 O
ATOM 2 P G B1059 26.567 99.597 118.521 1.00 50.98 P
ATOM 3 OP1 G B1059 27.707 100.179 119.273 1.00 50.78 O
ATOM 4 OP2 G B1059 26.130 98.198 118.815 1.00 48.83 O
ATOM 5 O5' G B1059 25.308 100.560 118.696 1.00 48.38 O
ATOM 6 C5' G B1059 25.444 101.980 118.531 1.00 47.77 C
ATOM 7 C4' G B1059 24.085 102.645 118.383 1.00 48.34 C
ATOM 8 O4' G B1059 23.329 101.995 117.319 1.00 46.93 O
ATOM 9 C3' G B1059 23.124 102.621 119.568 1.00 46.80 C
ATOM 10 O3' G B1059 23.401 103.621 120.545 1.00 45.12 O
ATOM 11 C2' G B1059 21.812 102.923 118.867 1.00 47.52 C
ATOM 12 O2' G B1059 21.776 104.278 118.465 1.00 47.30 O
ATOM 13 C1' G B1059 21.944 102.042 117.626 1.00 46.75 C
ATOM 14 N9 G B1059 21.480 100.679 117.886 1.00 46.41 N
ATOM 15 C8 G B1059 22.236 99.532 117.908 1.00 45.67 C
ATOM 16 N7 G B1059 21.537 98.461 118.170 1.00 46.40 N
ATOM 17 C5 G B1059 20.238 98.926 118.328 1.00 46.72 C
ATOM 18 C6 G B1059 19.033 98.223 118.614 1.00 44.68 C
ATOM 19 O6 G B1059 18.869 97.016 118.765 1.00 43.78 O
ATOM 20 N1 G B1059 17.948 99.083 118.709 1.00 43.38 N
ATOM 21 C2 G B1059 18.002 100.440 118.536 1.00 45.59 C
ATOM 22 N2 G B1059 16.849 101.101 118.679 1.00 44.79 N
ATOM 23 N3 G B1059 19.110 101.107 118.247 1.00 48.08 N
ATOM 24 C4 G B1059 20.184 100.292 118.162 1.00 47.51 C
ATOM 25 P U B1060 22.819 103.464 122.039 1.00 46.06 P
ATOM 26 OP1 U B1060 23.389 104.564 122.837 1.00 47.61 O
ATOM 27 OP2 U B1060 22.995 102.065 122.498 1.00 46.06 O
ATOM 28 O5' U B1060 21.252 103.720 121.896 1.00 49.16 O
TER
Atoms:
OP1: (10.908,109.541,118.371)
OP2: (13.403,109.945,118.774)
C3': (12.590,105.047,120.294)
C1': (14.320,104.455,118.795)
C5': (11.490,106.610,118.613)
O4': (13.343,105.185,118.072)
C8: (15.492,106.553,119.637)
O2': (13.142,102.680,119.909)
C6: (18.866,106.187,118.730)
C5: (17.493,106.187,119.028)
C4: (16.766,105.090,118.618)
P: (12.304,109.067,118.292)
C4': (12.130,105.279,118.864)
C2': (13.666,103.984,120.101)
C2: (18.534,104.131,117.740)
N1: (19.360,105.122,118.067)
N3: (17.234,104.014,117.967)
N6: (19.702,107.176,119.067)
N7: (16.675,107.106,119.673)
N9: (15.472,105.332,119.010)
O5': (12.376,107.660,119.015)
O3': (11.513,104.591,121.106)
OP2: (13.403,109.945,118.774)
C3': (12.590,105.047,120.294)
C1': (14.320,104.455,118.795)
C5': (11.490,106.610,118.613)
O4': (13.343,105.185,118.072)
C8: (15.492,106.553,119.637)
O2': (13.142,102.680,119.909)
C6: (18.866,106.187,118.730)
C5: (17.493,106.187,119.028)
C4: (16.766,105.090,118.618)
P: (12.304,109.067,118.292)
C4': (12.130,105.279,118.864)
C2': (13.666,103.984,120.101)
C2: (18.534,104.131,117.740)
N1: (19.360,105.122,118.067)
N3: (17.234,104.014,117.967)
N6: (19.702,107.176,119.067)
N7: (16.675,107.106,119.673)
N9: (15.472,105.332,119.010)
O5': (12.376,107.660,119.015)
O3': (11.513,104.591,121.106)
OP1: (27.707,100.179,119.273)
OP2: (26.130,98.198,118.815)
C3': (23.124,102.621,119.568)
C1': (21.944,102.042,117.626)
C5': (25.444,101.980,118.531)
O6: (18.869,97.016,118.765)
O4': (23.329,101.995,117.319)
C8: (22.236,99.532,117.908)
C2: (18.002,100.440,118.536)
C6: (19.033,98.223,118.614)
C5: (20.238,98.926,118.328)
C4: (20.184,100.292,118.162)
P: (26.567,99.597,118.521)
C4': (24.085,102.645,118.383)
C2': (21.812,102.923,118.867)
O2': (21.776,104.278,118.465)
N1: (17.948,99.083,118.709)
N2: (16.849,101.101,118.679)
N3: (19.110,101.107,118.247)
N7: (21.537,98.461,118.170)
N9: (21.480,100.679,117.886)
O5': (25.308,100.560,118.696)
O3': (23.401,103.621,120.545)
OP2: (26.130,98.198,118.815)
C3': (23.124,102.621,119.568)
C1': (21.944,102.042,117.626)
C5': (25.444,101.980,118.531)
O6: (18.869,97.016,118.765)
O4': (23.329,101.995,117.319)
C8: (22.236,99.532,117.908)
C2: (18.002,100.440,118.536)
C6: (19.033,98.223,118.614)
C5: (20.238,98.926,118.328)
C4: (20.184,100.292,118.162)
P: (26.567,99.597,118.521)
C4': (24.085,102.645,118.383)
C2': (21.812,102.923,118.867)
O2': (21.776,104.278,118.465)
N1: (17.948,99.083,118.709)
N2: (16.849,101.101,118.679)
N3: (19.110,101.107,118.247)
N7: (21.537,98.461,118.170)
N9: (21.480,100.679,117.886)
O5': (25.308,100.560,118.696)
O3': (23.401,103.621,120.545)
Image (generated by PyMOL):