ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1Q86:A554:A1052

Extra

PDB:
ATOM 1 O3' A A 553 -0.813 91.309 98.066 1.00 52.54 O
ATOM 2 P A A 554 -0.904 90.767 99.579 1.00 52.76 P
ATOM 3 OP1 A A 554 -1.032 89.280 99.492 1.00 49.51 O
ATOM 4 OP2 A A 554 -1.919 91.561 100.319 1.00 51.39 O
ATOM 5 O5' A A 554 0.513 91.118 100.223 1.00 52.74 O
ATOM 6 C5' A A 554 1.728 90.502 99.746 1.00 48.69 C
ATOM 7 C4' A A 554 2.920 91.321 100.166 1.00 44.69 C
ATOM 8 O4' A A 554 2.798 92.658 99.613 1.00 44.98 O
ATOM 9 C3' A A 554 3.027 91.571 101.655 1.00 43.72 C
ATOM 10 O3' A A 554 3.609 90.473 102.329 1.00 41.96 O
ATOM 11 C2' A A 554 3.894 92.818 101.703 1.00 43.63 C
ATOM 12 O2' A A 554 5.257 92.536 101.446 1.00 43.21 O
ATOM 13 C1' A A 554 3.324 93.608 100.527 1.00 43.58 C
ATOM 14 N9 A A 554 2.243 94.503 100.923 1.00 43.03 N
ATOM 15 C8 A A 554 0.907 94.216 101.006 1.00 44.44 C
ATOM 16 N7 A A 554 0.171 95.226 101.408 1.00 45.32 N
ATOM 17 C5 A A 554 1.086 96.252 101.595 1.00 44.40 C
ATOM 18 C6 A A 554 0.938 97.590 102.011 1.00 43.60 C
ATOM 19 N6 A A 554 -0.235 98.149 102.319 1.00 42.11 N
ATOM 20 N1 A A 554 2.053 98.344 102.097 1.00 43.66 N
ATOM 21 C2 A A 554 3.227 97.789 101.782 1.00 44.72 C
ATOM 22 N3 A A 554 3.493 96.548 101.374 1.00 45.29 N
ATOM 23 C4 A A 554 2.365 95.820 101.301 1.00 44.15 C
ATOM 24 P U A 555 3.010 90.015 103.743 1.00 40.34 P
ATOM 25 OP1 U A 555 3.922 88.985 104.287 1.00 38.73 O
ATOM 26 OP2 U A 555 1.573 89.702 103.538 1.00 40.59 O
ATOM 27 O5' U A 555 3.107 91.310 104.661 1.00 35.84 O
TER

ATOM 1 O3' A B1051 5.949 106.242 97.786 1.00 47.01 O
ATOM 2 P G B1052 6.423 106.141 99.313 1.00 46.40 P
ATOM 3 OP1 G B1052 5.774 107.266 100.019 1.00 47.00 O
ATOM 4 OP2 G B1052 7.898 106.004 99.351 1.00 46.09 O
ATOM 5 O5' G B1052 5.789 104.768 99.823 1.00 47.65 O
ATOM 6 C5' G B1052 4.377 104.653 100.068 1.00 44.02 C
ATOM 7 C4' G B1052 4.007 103.231 100.412 1.00 43.21 C
ATOM 8 O4' G B1052 4.432 102.351 99.343 1.00 44.66 O
ATOM 9 C3' G B1052 4.639 102.609 101.642 1.00 44.05 C
ATOM 10 O3' G B1052 3.974 102.977 102.835 1.00 43.99 O
ATOM 11 C2' G B1052 4.435 101.126 101.373 1.00 46.12 C
ATOM 12 O2' G B1052 3.097 100.732 101.615 1.00 47.66 O
ATOM 13 C1' G B1052 4.712 101.060 99.872 1.00 45.69 C
ATOM 14 N9 G B1052 6.099 100.722 99.564 1.00 45.20 N
ATOM 15 C8 G B1052 7.082 101.583 99.146 1.00 46.21 C
ATOM 16 N7 G B1052 8.226 100.992 98.935 1.00 46.79 N
ATOM 17 C5 G B1052 7.987 99.659 99.234 1.00 44.92 C
ATOM 18 C6 G B1052 8.859 98.535 99.186 1.00 44.47 C
ATOM 19 O6 G B1052 10.050 98.493 98.855 1.00 43.17 O
ATOM 20 N1 G B1052 8.210 97.372 99.573 1.00 44.78 N
ATOM 21 C2 G B1052 6.894 97.293 99.958 1.00 45.89 C
ATOM 22 N2 G B1052 6.456 96.073 100.304 1.00 44.90 N
ATOM 23 N3 G B1052 6.069 98.332 100.002 1.00 45.48 N
ATOM 24 C4 G B1052 6.679 99.475 99.630 1.00 44.80 C
ATOM 25 P G B1053 4.750 102.879 104.237 1.00 44.47 P
ATOM 26 OP1 G B1053 3.764 103.211 105.290 1.00 45.02 O
ATOM 27 OP2 G B1053 5.995 103.678 104.131 1.00 48.18 O
ATOM 28 O5' G B1053 5.193 101.349 104.358 1.00 42.50 O
TER

Atoms:
OP1: (-1.032,89.280,99.492)
OP2: (-1.919,91.561,100.319)
C3': (3.027,91.571,101.655)
C1': (3.324,93.608,100.527)
C5': (1.728,90.502,99.746)
O4': (2.798,92.658,99.613)
C8: (0.907,94.216,101.006)
O2': (5.257,92.536,101.446)
C6: (0.938,97.590,102.011)
C5: (1.086,96.252,101.595)
C4: (2.365,95.820,101.301)
P: (-0.904,90.767,99.579)
C4': (2.920,91.321,100.166)
C2': (3.894,92.818,101.703)
C2: (3.227,97.789,101.782)
N1: (2.053,98.344,102.097)
N3: (3.493,96.548,101.374)
N6: (-0.235,98.149,102.319)
N7: (0.171,95.226,101.408)
N9: (2.243,94.503,100.923)
O5': (0.513,91.118,100.223)
O3': (3.609,90.473,102.329)
OP1: (5.774,107.266,100.019)
OP2: (7.898,106.004,99.351)
C3': (4.639,102.609,101.642)
C1': (4.712,101.060,99.872)
C5': (4.377,104.653,100.068)
O6: (10.050,98.493,98.855)
O4': (4.432,102.351,99.343)
C8: (7.082,101.583,99.146)
C2: (6.894,97.293,99.958)
C6: (8.859,98.535,99.186)
C5: (7.987,99.659,99.234)
C4: (6.679,99.475,99.630)
P: (6.423,106.141,99.313)
C4': (4.007,103.231,100.412)
C2': (4.435,101.126,101.373)
O2': (3.097,100.732,101.615)
N1: (8.210,97.372,99.573)
N2: (6.456,96.073,100.304)
N3: (6.069,98.332,100.002)
N7: (8.226,100.992,98.935)
N9: (6.099,100.722,99.564)
O5': (5.789,104.768,99.823)
O3': (3.974,102.977,102.835)
Image (generated by PyMOL):
PyMOL image
show in jmol