Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A471:A466
Extra
PDB:
ATOM 1 O3' C A 470 42.743 -76.847 -41.862 1.00 77.58 O
ATOM 2 P A A 471 44.201 -76.265 -41.529 1.00 74.55 P
ATOM 3 OP1 A A 471 45.167 -76.797 -42.536 1.00 60.18 O
ATOM 4 OP2 A A 471 44.488 -76.398 -40.059 1.00 55.94 O
ATOM 5 O5' A A 471 44.006 -74.734 -41.886 1.00 55.24 O
ATOM 6 C5' A A 471 44.162 -74.318 -43.219 1.00 51.32 C
ATOM 7 C4' A A 471 45.289 -73.339 -43.303 1.00 51.20 C
ATOM 8 O4' A A 471 46.182 -73.451 -42.163 1.00 51.03 O
ATOM 9 C3' A A 471 46.139 -73.515 -44.536 1.00 49.33 C
ATOM 10 O3' A A 471 46.448 -72.233 -45.008 1.00 44.37 O
ATOM 11 C2' A A 471 47.386 -74.213 -44.013 1.00 52.24 C
ATOM 12 O2' A A 471 48.534 -73.878 -44.753 1.00 54.67 O
ATOM 13 C1' A A 471 47.504 -73.633 -42.613 1.00 49.11 C
ATOM 14 N9 A A 471 48.215 -74.509 -41.681 1.00 48.03 N
ATOM 15 C8 A A 471 47.690 -75.391 -40.770 1.00 49.69 C
ATOM 16 N7 A A 471 48.596 -76.027 -40.065 1.00 50.08 N
ATOM 17 C5 A A 471 49.800 -75.538 -40.548 1.00 53.78 C
ATOM 18 C6 A A 471 51.148 -75.815 -40.213 1.00 59.15 C
ATOM 19 N6 A A 471 51.527 -76.696 -39.274 1.00 54.30 N
ATOM 20 N1 A A 471 52.111 -75.145 -40.888 1.00 53.98 N
ATOM 21 C2 A A 471 51.743 -74.262 -41.829 1.00 54.73 C
ATOM 22 N3 A A 471 50.520 -73.919 -42.232 1.00 56.02 N
ATOM 23 C4 A A 471 49.581 -74.599 -41.545 1.00 51.98 C
ATOM 24 P G A 472 45.809 -71.755 -46.389 1.00 49.26 P
ATOM 25 OP1 G A 472 44.397 -71.366 -46.110 1.00 40.17 O
ATOM 26 OP2 G A 472 46.114 -72.849 -47.372 1.00 43.11 O
ATOM 27 O5' G A 472 46.672 -70.459 -46.748 1.00 47.25 O
TER
ATOM 1 O3' C B 465 59.897 -73.866 -47.330 1.00 49.46 O
ATOM 2 P G B 466 60.456 -73.697 -45.827 1.00 50.24 P
ATOM 3 OP1 G B 466 61.193 -72.405 -45.707 1.00 43.45 O
ATOM 4 OP2 G B 466 61.146 -74.998 -45.546 1.00 46.06 O
ATOM 5 O5' G B 466 59.158 -73.583 -44.908 1.00 55.31 O
ATOM 6 C5' G B 466 59.271 -73.353 -43.503 1.00 53.35 C
ATOM 7 C4' G B 466 57.938 -73.602 -42.826 1.00 51.84 C
ATOM 8 O4' G B 466 57.045 -72.460 -42.958 1.00 49.98 O
ATOM 9 C3' G B 466 57.186 -74.793 -43.383 1.00 43.22 C
ATOM 10 O3' G B 466 57.664 -75.974 -42.740 1.00 42.93 O
ATOM 11 C2' G B 466 55.741 -74.432 -43.067 1.00 43.87 C
ATOM 12 O2' G B 466 55.409 -74.731 -41.733 1.00 49.82 O
ATOM 13 C1' G B 466 55.745 -72.912 -43.243 1.00 44.00 C
ATOM 14 N9 G B 466 55.485 -72.578 -44.631 1.00 45.62 N
ATOM 15 C8 G B 466 56.427 -72.311 -45.588 1.00 48.30 C
ATOM 16 N7 G B 466 55.917 -72.112 -46.767 1.00 49.61 N
ATOM 17 C5 G B 466 54.556 -72.241 -46.574 1.00 50.27 C
ATOM 18 C6 G B 466 53.502 -72.154 -47.498 1.00 48.69 C
ATOM 19 O6 G B 466 53.565 -71.943 -48.717 1.00 47.23 O
ATOM 20 N1 G B 466 52.272 -72.361 -46.887 1.00 51.63 N
ATOM 21 C2 G B 466 52.090 -72.626 -45.550 1.00 50.98 C
ATOM 22 N2 G B 466 50.831 -72.819 -45.152 1.00 49.08 N
ATOM 23 N3 G B 466 53.073 -72.703 -44.672 1.00 56.36 N
ATOM 24 C4 G B 466 54.272 -72.509 -45.253 1.00 52.93 C
ATOM 25 P C B 467 57.086 -77.411 -43.149 1.00 43.10 P
ATOM 26 OP1 C B 467 57.585 -78.452 -42.218 1.00 39.58 O
ATOM 27 OP2 C B 467 57.250 -77.591 -44.605 1.00 38.87 O
ATOM 28 O5' C B 467 55.531 -77.272 -42.874 1.00 55.98 O
TER
ATOM 2 P A A 471 44.201 -76.265 -41.529 1.00 74.55 P
ATOM 3 OP1 A A 471 45.167 -76.797 -42.536 1.00 60.18 O
ATOM 4 OP2 A A 471 44.488 -76.398 -40.059 1.00 55.94 O
ATOM 5 O5' A A 471 44.006 -74.734 -41.886 1.00 55.24 O
ATOM 6 C5' A A 471 44.162 -74.318 -43.219 1.00 51.32 C
ATOM 7 C4' A A 471 45.289 -73.339 -43.303 1.00 51.20 C
ATOM 8 O4' A A 471 46.182 -73.451 -42.163 1.00 51.03 O
ATOM 9 C3' A A 471 46.139 -73.515 -44.536 1.00 49.33 C
ATOM 10 O3' A A 471 46.448 -72.233 -45.008 1.00 44.37 O
ATOM 11 C2' A A 471 47.386 -74.213 -44.013 1.00 52.24 C
ATOM 12 O2' A A 471 48.534 -73.878 -44.753 1.00 54.67 O
ATOM 13 C1' A A 471 47.504 -73.633 -42.613 1.00 49.11 C
ATOM 14 N9 A A 471 48.215 -74.509 -41.681 1.00 48.03 N
ATOM 15 C8 A A 471 47.690 -75.391 -40.770 1.00 49.69 C
ATOM 16 N7 A A 471 48.596 -76.027 -40.065 1.00 50.08 N
ATOM 17 C5 A A 471 49.800 -75.538 -40.548 1.00 53.78 C
ATOM 18 C6 A A 471 51.148 -75.815 -40.213 1.00 59.15 C
ATOM 19 N6 A A 471 51.527 -76.696 -39.274 1.00 54.30 N
ATOM 20 N1 A A 471 52.111 -75.145 -40.888 1.00 53.98 N
ATOM 21 C2 A A 471 51.743 -74.262 -41.829 1.00 54.73 C
ATOM 22 N3 A A 471 50.520 -73.919 -42.232 1.00 56.02 N
ATOM 23 C4 A A 471 49.581 -74.599 -41.545 1.00 51.98 C
ATOM 24 P G A 472 45.809 -71.755 -46.389 1.00 49.26 P
ATOM 25 OP1 G A 472 44.397 -71.366 -46.110 1.00 40.17 O
ATOM 26 OP2 G A 472 46.114 -72.849 -47.372 1.00 43.11 O
ATOM 27 O5' G A 472 46.672 -70.459 -46.748 1.00 47.25 O
TER
ATOM 1 O3' C B 465 59.897 -73.866 -47.330 1.00 49.46 O
ATOM 2 P G B 466 60.456 -73.697 -45.827 1.00 50.24 P
ATOM 3 OP1 G B 466 61.193 -72.405 -45.707 1.00 43.45 O
ATOM 4 OP2 G B 466 61.146 -74.998 -45.546 1.00 46.06 O
ATOM 5 O5' G B 466 59.158 -73.583 -44.908 1.00 55.31 O
ATOM 6 C5' G B 466 59.271 -73.353 -43.503 1.00 53.35 C
ATOM 7 C4' G B 466 57.938 -73.602 -42.826 1.00 51.84 C
ATOM 8 O4' G B 466 57.045 -72.460 -42.958 1.00 49.98 O
ATOM 9 C3' G B 466 57.186 -74.793 -43.383 1.00 43.22 C
ATOM 10 O3' G B 466 57.664 -75.974 -42.740 1.00 42.93 O
ATOM 11 C2' G B 466 55.741 -74.432 -43.067 1.00 43.87 C
ATOM 12 O2' G B 466 55.409 -74.731 -41.733 1.00 49.82 O
ATOM 13 C1' G B 466 55.745 -72.912 -43.243 1.00 44.00 C
ATOM 14 N9 G B 466 55.485 -72.578 -44.631 1.00 45.62 N
ATOM 15 C8 G B 466 56.427 -72.311 -45.588 1.00 48.30 C
ATOM 16 N7 G B 466 55.917 -72.112 -46.767 1.00 49.61 N
ATOM 17 C5 G B 466 54.556 -72.241 -46.574 1.00 50.27 C
ATOM 18 C6 G B 466 53.502 -72.154 -47.498 1.00 48.69 C
ATOM 19 O6 G B 466 53.565 -71.943 -48.717 1.00 47.23 O
ATOM 20 N1 G B 466 52.272 -72.361 -46.887 1.00 51.63 N
ATOM 21 C2 G B 466 52.090 -72.626 -45.550 1.00 50.98 C
ATOM 22 N2 G B 466 50.831 -72.819 -45.152 1.00 49.08 N
ATOM 23 N3 G B 466 53.073 -72.703 -44.672 1.00 56.36 N
ATOM 24 C4 G B 466 54.272 -72.509 -45.253 1.00 52.93 C
ATOM 25 P C B 467 57.086 -77.411 -43.149 1.00 43.10 P
ATOM 26 OP1 C B 467 57.585 -78.452 -42.218 1.00 39.58 O
ATOM 27 OP2 C B 467 57.250 -77.591 -44.605 1.00 38.87 O
ATOM 28 O5' C B 467 55.531 -77.272 -42.874 1.00 55.98 O
TER
Atoms:
OP1: (45.167,-76.797,-42.536)
OP2: (44.488,-76.398,-40.059)
C3': (46.139,-73.515,-44.536)
C1': (47.504,-73.633,-42.613)
C5': (44.162,-74.318,-43.219)
O4': (46.182,-73.451,-42.163)
C8: (47.690,-75.391,-40.770)
O2': (48.534,-73.878,-44.753)
C6: (51.148,-75.815,-40.213)
C5: (49.800,-75.538,-40.548)
C4: (49.581,-74.599,-41.545)
P: (44.201,-76.265,-41.529)
C4': (45.289,-73.339,-43.303)
C2': (47.386,-74.213,-44.013)
C2: (51.743,-74.262,-41.829)
N1: (52.111,-75.145,-40.888)
N3: (50.520,-73.919,-42.232)
N6: (51.527,-76.696,-39.274)
N7: (48.596,-76.027,-40.065)
N9: (48.215,-74.509,-41.681)
O5': (44.006,-74.734,-41.886)
O3': (46.448,-72.233,-45.008)
OP2: (44.488,-76.398,-40.059)
C3': (46.139,-73.515,-44.536)
C1': (47.504,-73.633,-42.613)
C5': (44.162,-74.318,-43.219)
O4': (46.182,-73.451,-42.163)
C8: (47.690,-75.391,-40.770)
O2': (48.534,-73.878,-44.753)
C6: (51.148,-75.815,-40.213)
C5: (49.800,-75.538,-40.548)
C4: (49.581,-74.599,-41.545)
P: (44.201,-76.265,-41.529)
C4': (45.289,-73.339,-43.303)
C2': (47.386,-74.213,-44.013)
C2: (51.743,-74.262,-41.829)
N1: (52.111,-75.145,-40.888)
N3: (50.520,-73.919,-42.232)
N6: (51.527,-76.696,-39.274)
N7: (48.596,-76.027,-40.065)
N9: (48.215,-74.509,-41.681)
O5': (44.006,-74.734,-41.886)
O3': (46.448,-72.233,-45.008)
OP1: (61.193,-72.405,-45.707)
OP2: (61.146,-74.998,-45.546)
C3': (57.186,-74.793,-43.383)
C1': (55.745,-72.912,-43.243)
C5': (59.271,-73.353,-43.503)
O6: (53.565,-71.943,-48.717)
O4': (57.045,-72.460,-42.958)
C8: (56.427,-72.311,-45.588)
C2: (52.090,-72.626,-45.550)
C6: (53.502,-72.154,-47.498)
C5: (54.556,-72.241,-46.574)
C4: (54.272,-72.509,-45.253)
P: (60.456,-73.697,-45.827)
C4': (57.938,-73.602,-42.826)
C2': (55.741,-74.432,-43.067)
O2': (55.409,-74.731,-41.733)
N1: (52.272,-72.361,-46.887)
N2: (50.831,-72.819,-45.152)
N3: (53.073,-72.703,-44.672)
N7: (55.917,-72.112,-46.767)
N9: (55.485,-72.578,-44.631)
O5': (59.158,-73.583,-44.908)
O3': (57.664,-75.974,-42.740)
OP2: (61.146,-74.998,-45.546)
C3': (57.186,-74.793,-43.383)
C1': (55.745,-72.912,-43.243)
C5': (59.271,-73.353,-43.503)
O6: (53.565,-71.943,-48.717)
O4': (57.045,-72.460,-42.958)
C8: (56.427,-72.311,-45.588)
C2: (52.090,-72.626,-45.550)
C6: (53.502,-72.154,-47.498)
C5: (54.556,-72.241,-46.574)
C4: (54.272,-72.509,-45.253)
P: (60.456,-73.697,-45.827)
C4': (57.938,-73.602,-42.826)
C2': (55.741,-74.432,-43.067)
O2': (55.409,-74.731,-41.733)
N1: (52.272,-72.361,-46.887)
N2: (50.831,-72.819,-45.152)
N3: (53.073,-72.703,-44.672)
N7: (55.917,-72.112,-46.767)
N9: (55.485,-72.578,-44.631)
O5': (59.158,-73.583,-44.908)
O3': (57.664,-75.974,-42.740)
Image (generated by PyMOL):