Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:910:967
Extra
PDB:
ATOM 1 O3' C A 9 56.747 41.439 102.818 1.00 50.21 O
ATOM 2 P A A 10 56.917 42.404 104.081 1.00 51.84 P
ATOM 3 OP1 A A 10 55.642 43.122 104.319 1.00 51.63 O
ATOM 4 OP2 A A 10 58.161 43.171 103.861 1.00 51.68 O
ATOM 5 O5' A A 10 57.149 41.400 105.295 1.00 53.06 O
ATOM 6 C5' A A 10 56.442 40.148 105.373 1.00 53.65 C
ATOM 7 C4' A A 10 56.352 39.691 106.806 1.00 55.08 C
ATOM 8 O4' A A 10 57.686 39.525 107.352 1.00 55.65 O
ATOM 9 C3' A A 10 55.686 40.677 107.742 1.00 55.98 C
ATOM 10 O3' A A 10 54.275 40.537 107.693 1.00 58.40 O
ATOM 11 C2' A A 10 56.277 40.297 109.091 1.00 56.45 C
ATOM 12 O2' A A 10 55.687 39.142 109.638 1.00 59.17 O
ATOM 13 C1' A A 10 57.716 39.964 108.700 1.00 56.34 C
ATOM 14 N9 A A 10 58.600 41.130 108.780 1.00 57.37 N
ATOM 15 C8 A A 10 59.118 41.856 107.738 1.00 57.42 C
ATOM 16 N7 A A 10 59.845 42.876 108.114 1.00 57.62 N
ATOM 17 C5 A A 10 59.813 42.816 109.498 1.00 57.90 C
ATOM 18 C6 A A 10 60.383 43.627 110.487 1.00 58.76 C
ATOM 19 N6 A A 10 61.125 44.704 110.221 1.00 58.72 N
ATOM 20 N1 A A 10 60.163 43.293 111.777 1.00 59.38 N
ATOM 21 C2 A A 10 59.422 42.215 112.040 1.00 58.74 C
ATOM 22 N3 A A 10 58.829 41.375 111.196 1.00 59.23 N
ATOM 23 C4 A A 10 59.063 41.737 109.923 1.00 58.11 C
ATOM 24 P C A 11 53.338 41.697 108.284 1.00 61.41 P
ATOM 25 OP1 C A 11 52.421 42.191 107.216 1.00 61.34 O
ATOM 26 OP2 C A 11 54.207 42.655 109.011 1.00 59.63 O
ATOM 27 O5' C A 11 52.424 40.942 109.341 1.00 62.92 O
TER
ATOM 1 O3' C B 66 61.257 43.868 121.563 1.00 66.47 O
ATOM 2 P G B 67 60.060 44.746 120.953 1.00 67.04 P
ATOM 3 OP1 G B 67 60.410 46.163 121.213 1.00 67.92 O
ATOM 4 OP2 G B 67 58.760 44.220 121.433 1.00 68.18 O
ATOM 5 O5' G B 67 60.149 44.452 119.390 1.00 66.56 O
ATOM 6 C5' G B 67 61.302 44.856 118.632 1.00 64.80 C
ATOM 7 C4' G B 67 61.202 44.356 117.214 1.00 63.28 C
ATOM 8 O4' G B 67 61.314 42.907 117.196 1.00 63.44 O
ATOM 9 C3' G B 67 59.880 44.607 116.515 1.00 62.77 C
ATOM 10 O3' G B 67 59.723 45.940 116.058 1.00 63.10 O
ATOM 11 C2' G B 67 59.936 43.584 115.393 1.00 63.05 C
ATOM 12 O2' G B 67 60.804 43.958 114.343 1.00 62.06 O
ATOM 13 C1' G B 67 60.521 42.382 116.137 1.00 63.62 C
ATOM 14 N9 G B 67 59.455 41.560 116.709 1.00 63.91 N
ATOM 15 C8 G B 67 59.182 41.345 118.039 1.00 64.18 C
ATOM 16 N7 G B 67 58.125 40.601 118.230 1.00 64.53 N
ATOM 17 C5 G B 67 57.679 40.300 116.950 1.00 63.09 C
ATOM 18 C6 G B 67 56.564 39.539 116.522 1.00 62.97 C
ATOM 19 O6 G B 67 55.711 38.969 117.205 1.00 64.72 O
ATOM 20 N1 G B 67 56.486 39.482 115.138 1.00 63.09 N
ATOM 21 C2 G B 67 57.361 40.087 114.274 1.00 62.91 C
ATOM 22 N2 G B 67 57.112 39.918 112.964 1.00 63.07 N
ATOM 23 N3 G B 67 58.399 40.804 114.660 1.00 62.32 N
ATOM 24 C4 G B 67 58.496 40.869 116.002 1.00 62.87 C
ATOM 25 P U B 68 58.280 46.649 116.168 1.00 62.90 P
ATOM 26 OP1 U B 68 58.470 48.068 115.795 1.00 64.73 O
ATOM 27 OP2 U B 68 57.678 46.314 117.483 1.00 62.18 O
ATOM 28 O5' U B 68 57.412 45.958 115.024 1.00 61.41 O
TER
ATOM 2 P A A 10 56.917 42.404 104.081 1.00 51.84 P
ATOM 3 OP1 A A 10 55.642 43.122 104.319 1.00 51.63 O
ATOM 4 OP2 A A 10 58.161 43.171 103.861 1.00 51.68 O
ATOM 5 O5' A A 10 57.149 41.400 105.295 1.00 53.06 O
ATOM 6 C5' A A 10 56.442 40.148 105.373 1.00 53.65 C
ATOM 7 C4' A A 10 56.352 39.691 106.806 1.00 55.08 C
ATOM 8 O4' A A 10 57.686 39.525 107.352 1.00 55.65 O
ATOM 9 C3' A A 10 55.686 40.677 107.742 1.00 55.98 C
ATOM 10 O3' A A 10 54.275 40.537 107.693 1.00 58.40 O
ATOM 11 C2' A A 10 56.277 40.297 109.091 1.00 56.45 C
ATOM 12 O2' A A 10 55.687 39.142 109.638 1.00 59.17 O
ATOM 13 C1' A A 10 57.716 39.964 108.700 1.00 56.34 C
ATOM 14 N9 A A 10 58.600 41.130 108.780 1.00 57.37 N
ATOM 15 C8 A A 10 59.118 41.856 107.738 1.00 57.42 C
ATOM 16 N7 A A 10 59.845 42.876 108.114 1.00 57.62 N
ATOM 17 C5 A A 10 59.813 42.816 109.498 1.00 57.90 C
ATOM 18 C6 A A 10 60.383 43.627 110.487 1.00 58.76 C
ATOM 19 N6 A A 10 61.125 44.704 110.221 1.00 58.72 N
ATOM 20 N1 A A 10 60.163 43.293 111.777 1.00 59.38 N
ATOM 21 C2 A A 10 59.422 42.215 112.040 1.00 58.74 C
ATOM 22 N3 A A 10 58.829 41.375 111.196 1.00 59.23 N
ATOM 23 C4 A A 10 59.063 41.737 109.923 1.00 58.11 C
ATOM 24 P C A 11 53.338 41.697 108.284 1.00 61.41 P
ATOM 25 OP1 C A 11 52.421 42.191 107.216 1.00 61.34 O
ATOM 26 OP2 C A 11 54.207 42.655 109.011 1.00 59.63 O
ATOM 27 O5' C A 11 52.424 40.942 109.341 1.00 62.92 O
TER
ATOM 1 O3' C B 66 61.257 43.868 121.563 1.00 66.47 O
ATOM 2 P G B 67 60.060 44.746 120.953 1.00 67.04 P
ATOM 3 OP1 G B 67 60.410 46.163 121.213 1.00 67.92 O
ATOM 4 OP2 G B 67 58.760 44.220 121.433 1.00 68.18 O
ATOM 5 O5' G B 67 60.149 44.452 119.390 1.00 66.56 O
ATOM 6 C5' G B 67 61.302 44.856 118.632 1.00 64.80 C
ATOM 7 C4' G B 67 61.202 44.356 117.214 1.00 63.28 C
ATOM 8 O4' G B 67 61.314 42.907 117.196 1.00 63.44 O
ATOM 9 C3' G B 67 59.880 44.607 116.515 1.00 62.77 C
ATOM 10 O3' G B 67 59.723 45.940 116.058 1.00 63.10 O
ATOM 11 C2' G B 67 59.936 43.584 115.393 1.00 63.05 C
ATOM 12 O2' G B 67 60.804 43.958 114.343 1.00 62.06 O
ATOM 13 C1' G B 67 60.521 42.382 116.137 1.00 63.62 C
ATOM 14 N9 G B 67 59.455 41.560 116.709 1.00 63.91 N
ATOM 15 C8 G B 67 59.182 41.345 118.039 1.00 64.18 C
ATOM 16 N7 G B 67 58.125 40.601 118.230 1.00 64.53 N
ATOM 17 C5 G B 67 57.679 40.300 116.950 1.00 63.09 C
ATOM 18 C6 G B 67 56.564 39.539 116.522 1.00 62.97 C
ATOM 19 O6 G B 67 55.711 38.969 117.205 1.00 64.72 O
ATOM 20 N1 G B 67 56.486 39.482 115.138 1.00 63.09 N
ATOM 21 C2 G B 67 57.361 40.087 114.274 1.00 62.91 C
ATOM 22 N2 G B 67 57.112 39.918 112.964 1.00 63.07 N
ATOM 23 N3 G B 67 58.399 40.804 114.660 1.00 62.32 N
ATOM 24 C4 G B 67 58.496 40.869 116.002 1.00 62.87 C
ATOM 25 P U B 68 58.280 46.649 116.168 1.00 62.90 P
ATOM 26 OP1 U B 68 58.470 48.068 115.795 1.00 64.73 O
ATOM 27 OP2 U B 68 57.678 46.314 117.483 1.00 62.18 O
ATOM 28 O5' U B 68 57.412 45.958 115.024 1.00 61.41 O
TER
Atoms:
OP1: (55.642,43.122,104.319)
OP2: (58.161,43.171,103.861)
C3': (55.686,40.677,107.742)
C1': (57.716,39.964,108.700)
C5': (56.442,40.148,105.373)
O4': (57.686,39.525,107.352)
C8: (59.118,41.856,107.738)
O2': (55.687,39.142,109.638)
C6: (60.383,43.627,110.487)
C5: (59.813,42.816,109.498)
C4: (59.063,41.737,109.923)
P: (56.917,42.404,104.081)
C4': (56.352,39.691,106.806)
C2': (56.277,40.297,109.091)
C2: (59.422,42.215,112.040)
N1: (60.163,43.293,111.777)
N3: (58.829,41.375,111.196)
N6: (61.125,44.704,110.221)
N7: (59.845,42.876,108.114)
N9: (58.600,41.130,108.780)
O5': (57.149,41.400,105.295)
O3': (54.275,40.537,107.693)
OP2: (58.161,43.171,103.861)
C3': (55.686,40.677,107.742)
C1': (57.716,39.964,108.700)
C5': (56.442,40.148,105.373)
O4': (57.686,39.525,107.352)
C8: (59.118,41.856,107.738)
O2': (55.687,39.142,109.638)
C6: (60.383,43.627,110.487)
C5: (59.813,42.816,109.498)
C4: (59.063,41.737,109.923)
P: (56.917,42.404,104.081)
C4': (56.352,39.691,106.806)
C2': (56.277,40.297,109.091)
C2: (59.422,42.215,112.040)
N1: (60.163,43.293,111.777)
N3: (58.829,41.375,111.196)
N6: (61.125,44.704,110.221)
N7: (59.845,42.876,108.114)
N9: (58.600,41.130,108.780)
O5': (57.149,41.400,105.295)
O3': (54.275,40.537,107.693)
OP1: (60.410,46.163,121.213)
OP2: (58.760,44.220,121.433)
C3': (59.880,44.607,116.515)
C1': (60.521,42.382,116.137)
C5': (61.302,44.856,118.632)
O6: (55.711,38.969,117.205)
O4': (61.314,42.907,117.196)
C8: (59.182,41.345,118.039)
C2: (57.361,40.087,114.274)
C6: (56.564,39.539,116.522)
C5: (57.679,40.300,116.950)
C4: (58.496,40.869,116.002)
P: (60.060,44.746,120.953)
C4': (61.202,44.356,117.214)
C2': (59.936,43.584,115.393)
O2': (60.804,43.958,114.343)
N1: (56.486,39.482,115.138)
N2: (57.112,39.918,112.964)
N3: (58.399,40.804,114.660)
N7: (58.125,40.601,118.230)
N9: (59.455,41.560,116.709)
O5': (60.149,44.452,119.390)
O3': (59.723,45.940,116.058)
OP2: (58.760,44.220,121.433)
C3': (59.880,44.607,116.515)
C1': (60.521,42.382,116.137)
C5': (61.302,44.856,118.632)
O6: (55.711,38.969,117.205)
O4': (61.314,42.907,117.196)
C8: (59.182,41.345,118.039)
C2: (57.361,40.087,114.274)
C6: (56.564,39.539,116.522)
C5: (57.679,40.300,116.950)
C4: (58.496,40.869,116.002)
P: (60.060,44.746,120.953)
C4': (61.202,44.356,117.214)
C2': (59.936,43.584,115.393)
O2': (60.804,43.958,114.343)
N1: (56.486,39.482,115.138)
N2: (57.112,39.918,112.964)
N3: (58.399,40.804,114.660)
N7: (58.125,40.601,118.230)
N9: (59.455,41.560,116.709)
O5': (60.149,44.452,119.390)
O3': (59.723,45.940,116.058)
Image (generated by PyMOL):