Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01889:02113
Extra
PDB:
ATOM 1 O3' A A1888 115.797 99.704 56.018 1.00 57.86 O
ATOM 2 P A A1889 115.997 99.639 57.611 1.00 58.34 P
ATOM 3 OP1 A A1889 117.313 100.266 57.914 1.00 57.51 O
ATOM 4 OP2 A A1889 115.720 98.257 58.079 1.00 57.38 O
ATOM 5 O5' A A1889 114.838 100.576 58.175 1.00 57.04 O
ATOM 6 C5' A A1889 114.814 101.989 57.891 1.00 54.71 C
ATOM 7 C4' A A1889 113.436 102.546 58.151 1.00 52.91 C
ATOM 8 O4' A A1889 112.493 101.871 57.279 1.00 53.55 O
ATOM 9 C3' A A1889 112.885 102.288 59.543 1.00 52.71 C
ATOM 10 O3' A A1889 113.342 103.218 60.509 1.00 51.94 O
ATOM 11 C2' A A1889 111.385 102.365 59.317 1.00 52.55 C
ATOM 12 O2' A A1889 110.906 103.690 59.210 1.00 52.20 O
ATOM 13 C1' A A1889 111.266 101.664 57.965 1.00 53.04 C
ATOM 14 N9 A A1889 111.060 100.223 58.112 1.00 52.76 N
ATOM 15 C8 A A1889 112.005 99.227 58.172 1.00 51.91 C
ATOM 16 N7 A A1889 111.501 98.027 58.314 1.00 50.01 N
ATOM 17 C5 A A1889 110.133 98.243 58.349 1.00 51.91 C
ATOM 18 C6 A A1889 109.045 97.371 58.474 1.00 51.52 C
ATOM 19 N6 A A1889 109.163 96.050 58.597 1.00 52.59 N
ATOM 20 N1 A A1889 107.808 97.909 58.465 1.00 51.63 N
ATOM 21 C2 A A1889 107.685 99.236 58.339 1.00 51.08 C
ATOM 22 N3 A A1889 108.629 100.159 58.215 1.00 51.73 N
ATOM 23 C4 A A1889 109.847 99.591 58.226 1.00 52.99 C
ATOM 24 P G A1890 113.697 102.703 61.989 1.00 53.90 P
ATOM 25 OP1 G A1890 113.890 103.901 62.849 1.00 52.51 O
ATOM 26 OP2 G A1890 114.778 101.692 61.888 1.00 54.05 O
ATOM 27 O5' G A1890 112.377 101.947 62.457 1.00 52.86 O
TER
ATOM 1 O3' A B2112 100.257 96.968 52.350 1.00 47.24 O
ATOM 2 P G B2113 99.635 97.297 53.793 1.00 48.43 P
ATOM 3 OP1 G B2113 98.819 96.105 54.158 1.00 48.05 O
ATOM 4 OP2 G B2113 99.004 98.640 53.782 1.00 48.17 O
ATOM 5 O5' G B2113 100.901 97.385 54.756 1.00 47.19 O
ATOM 6 C5' G B2113 101.626 96.203 55.144 1.00 46.38 C
ATOM 7 C4' G B2113 102.877 96.587 55.886 1.00 45.12 C
ATOM 8 O4' G B2113 103.677 97.430 55.022 1.00 44.08 O
ATOM 9 C3' G B2113 102.668 97.443 57.123 1.00 46.11 C
ATOM 10 O3' G B2113 102.358 96.672 58.272 1.00 47.02 O
ATOM 11 C2' G B2113 104.010 98.141 57.262 1.00 45.88 C
ATOM 12 O2' G B2113 104.997 97.291 57.805 1.00 47.83 O
ATOM 13 C1' G B2113 104.344 98.415 55.798 1.00 45.63 C
ATOM 14 N9 G B2113 103.918 99.740 55.350 1.00 45.39 N
ATOM 15 C8 G B2113 102.816 100.054 54.589 1.00 44.29 C
ATOM 16 N7 G B2113 102.713 101.332 54.339 1.00 45.29 N
ATOM 17 C5 G B2113 103.809 101.898 54.977 1.00 45.83 C
ATOM 18 C6 G B2113 104.230 103.254 55.059 1.00 46.69 C
ATOM 19 O6 G B2113 103.704 104.257 54.564 1.00 47.93 O
ATOM 20 N1 G B2113 105.391 103.383 55.811 1.00 46.45 N
ATOM 21 C2 G B2113 106.066 102.348 56.407 1.00 46.57 C
ATOM 22 N2 G B2113 107.173 102.683 57.094 1.00 46.48 N
ATOM 23 N3 G B2113 105.687 101.080 56.337 1.00 44.89 N
ATOM 24 C4 G B2113 104.560 100.930 55.611 1.00 45.44 C
ATOM 25 P C B2114 101.643 97.376 59.525 1.00 48.21 P
ATOM 26 OP1 C B2114 101.389 96.332 60.546 1.00 50.00 O
ATOM 27 OP2 C B2114 100.506 98.180 58.997 1.00 49.62 O
ATOM 28 O5' C B2114 102.735 98.385 60.092 1.00 46.49 O
TER
ATOM 2 P A A1889 115.997 99.639 57.611 1.00 58.34 P
ATOM 3 OP1 A A1889 117.313 100.266 57.914 1.00 57.51 O
ATOM 4 OP2 A A1889 115.720 98.257 58.079 1.00 57.38 O
ATOM 5 O5' A A1889 114.838 100.576 58.175 1.00 57.04 O
ATOM 6 C5' A A1889 114.814 101.989 57.891 1.00 54.71 C
ATOM 7 C4' A A1889 113.436 102.546 58.151 1.00 52.91 C
ATOM 8 O4' A A1889 112.493 101.871 57.279 1.00 53.55 O
ATOM 9 C3' A A1889 112.885 102.288 59.543 1.00 52.71 C
ATOM 10 O3' A A1889 113.342 103.218 60.509 1.00 51.94 O
ATOM 11 C2' A A1889 111.385 102.365 59.317 1.00 52.55 C
ATOM 12 O2' A A1889 110.906 103.690 59.210 1.00 52.20 O
ATOM 13 C1' A A1889 111.266 101.664 57.965 1.00 53.04 C
ATOM 14 N9 A A1889 111.060 100.223 58.112 1.00 52.76 N
ATOM 15 C8 A A1889 112.005 99.227 58.172 1.00 51.91 C
ATOM 16 N7 A A1889 111.501 98.027 58.314 1.00 50.01 N
ATOM 17 C5 A A1889 110.133 98.243 58.349 1.00 51.91 C
ATOM 18 C6 A A1889 109.045 97.371 58.474 1.00 51.52 C
ATOM 19 N6 A A1889 109.163 96.050 58.597 1.00 52.59 N
ATOM 20 N1 A A1889 107.808 97.909 58.465 1.00 51.63 N
ATOM 21 C2 A A1889 107.685 99.236 58.339 1.00 51.08 C
ATOM 22 N3 A A1889 108.629 100.159 58.215 1.00 51.73 N
ATOM 23 C4 A A1889 109.847 99.591 58.226 1.00 52.99 C
ATOM 24 P G A1890 113.697 102.703 61.989 1.00 53.90 P
ATOM 25 OP1 G A1890 113.890 103.901 62.849 1.00 52.51 O
ATOM 26 OP2 G A1890 114.778 101.692 61.888 1.00 54.05 O
ATOM 27 O5' G A1890 112.377 101.947 62.457 1.00 52.86 O
TER
ATOM 1 O3' A B2112 100.257 96.968 52.350 1.00 47.24 O
ATOM 2 P G B2113 99.635 97.297 53.793 1.00 48.43 P
ATOM 3 OP1 G B2113 98.819 96.105 54.158 1.00 48.05 O
ATOM 4 OP2 G B2113 99.004 98.640 53.782 1.00 48.17 O
ATOM 5 O5' G B2113 100.901 97.385 54.756 1.00 47.19 O
ATOM 6 C5' G B2113 101.626 96.203 55.144 1.00 46.38 C
ATOM 7 C4' G B2113 102.877 96.587 55.886 1.00 45.12 C
ATOM 8 O4' G B2113 103.677 97.430 55.022 1.00 44.08 O
ATOM 9 C3' G B2113 102.668 97.443 57.123 1.00 46.11 C
ATOM 10 O3' G B2113 102.358 96.672 58.272 1.00 47.02 O
ATOM 11 C2' G B2113 104.010 98.141 57.262 1.00 45.88 C
ATOM 12 O2' G B2113 104.997 97.291 57.805 1.00 47.83 O
ATOM 13 C1' G B2113 104.344 98.415 55.798 1.00 45.63 C
ATOM 14 N9 G B2113 103.918 99.740 55.350 1.00 45.39 N
ATOM 15 C8 G B2113 102.816 100.054 54.589 1.00 44.29 C
ATOM 16 N7 G B2113 102.713 101.332 54.339 1.00 45.29 N
ATOM 17 C5 G B2113 103.809 101.898 54.977 1.00 45.83 C
ATOM 18 C6 G B2113 104.230 103.254 55.059 1.00 46.69 C
ATOM 19 O6 G B2113 103.704 104.257 54.564 1.00 47.93 O
ATOM 20 N1 G B2113 105.391 103.383 55.811 1.00 46.45 N
ATOM 21 C2 G B2113 106.066 102.348 56.407 1.00 46.57 C
ATOM 22 N2 G B2113 107.173 102.683 57.094 1.00 46.48 N
ATOM 23 N3 G B2113 105.687 101.080 56.337 1.00 44.89 N
ATOM 24 C4 G B2113 104.560 100.930 55.611 1.00 45.44 C
ATOM 25 P C B2114 101.643 97.376 59.525 1.00 48.21 P
ATOM 26 OP1 C B2114 101.389 96.332 60.546 1.00 50.00 O
ATOM 27 OP2 C B2114 100.506 98.180 58.997 1.00 49.62 O
ATOM 28 O5' C B2114 102.735 98.385 60.092 1.00 46.49 O
TER
Atoms:
OP1: (117.313,100.266,57.914)
OP2: (115.720,98.257,58.079)
C3': (112.885,102.288,59.543)
C1': (111.266,101.664,57.965)
C5': (114.814,101.989,57.891)
O4': (112.493,101.871,57.279)
C8: (112.005,99.227,58.172)
O2': (110.906,103.690,59.210)
C6: (109.045,97.371,58.474)
C5: (110.133,98.243,58.349)
C4: (109.847,99.591,58.226)
P: (115.997,99.639,57.611)
C4': (113.436,102.546,58.151)
C2': (111.385,102.365,59.317)
C2: (107.685,99.236,58.339)
N1: (107.808,97.909,58.465)
N3: (108.629,100.159,58.215)
N6: (109.163,96.050,58.597)
N7: (111.501,98.027,58.314)
N9: (111.060,100.223,58.112)
O5': (114.838,100.576,58.175)
O3': (113.342,103.218,60.509)
OP2: (115.720,98.257,58.079)
C3': (112.885,102.288,59.543)
C1': (111.266,101.664,57.965)
C5': (114.814,101.989,57.891)
O4': (112.493,101.871,57.279)
C8: (112.005,99.227,58.172)
O2': (110.906,103.690,59.210)
C6: (109.045,97.371,58.474)
C5: (110.133,98.243,58.349)
C4: (109.847,99.591,58.226)
P: (115.997,99.639,57.611)
C4': (113.436,102.546,58.151)
C2': (111.385,102.365,59.317)
C2: (107.685,99.236,58.339)
N1: (107.808,97.909,58.465)
N3: (108.629,100.159,58.215)
N6: (109.163,96.050,58.597)
N7: (111.501,98.027,58.314)
N9: (111.060,100.223,58.112)
O5': (114.838,100.576,58.175)
O3': (113.342,103.218,60.509)
OP1: (98.819,96.105,54.158)
OP2: (99.004,98.640,53.782)
C3': (102.668,97.443,57.123)
C1': (104.344,98.415,55.798)
C5': (101.626,96.203,55.144)
O6: (103.704,104.257,54.564)
O4': (103.677,97.430,55.022)
C8: (102.816,100.054,54.589)
C2: (106.066,102.348,56.407)
C6: (104.230,103.254,55.059)
C5: (103.809,101.898,54.977)
C4: (104.560,100.930,55.611)
P: (99.635,97.297,53.793)
C4': (102.877,96.587,55.886)
C2': (104.010,98.141,57.262)
O2': (104.997,97.291,57.805)
N1: (105.391,103.383,55.811)
N2: (107.173,102.683,57.094)
N3: (105.687,101.080,56.337)
N7: (102.713,101.332,54.339)
N9: (103.918,99.740,55.350)
O5': (100.901,97.385,54.756)
O3': (102.358,96.672,58.272)
OP2: (99.004,98.640,53.782)
C3': (102.668,97.443,57.123)
C1': (104.344,98.415,55.798)
C5': (101.626,96.203,55.144)
O6: (103.704,104.257,54.564)
O4': (103.677,97.430,55.022)
C8: (102.816,100.054,54.589)
C2: (106.066,102.348,56.407)
C6: (104.230,103.254,55.059)
C5: (103.809,101.898,54.977)
C4: (104.560,100.930,55.611)
P: (99.635,97.297,53.793)
C4': (102.877,96.587,55.886)
C2': (104.010,98.141,57.262)
O2': (104.997,97.291,57.805)
N1: (105.391,103.383,55.811)
N2: (107.173,102.683,57.094)
N3: (105.687,101.080,56.337)
N7: (102.713,101.332,54.339)
N9: (103.918,99.740,55.350)
O5': (100.901,97.385,54.756)
O3': (102.358,96.672,58.272)
Image (generated by PyMOL):