Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12686:12666
Extra
PDB:
ATOM 1 O3' A A2685 2.266 29.798 33.481 1.00 51.75 O
ATOM 2 P A A2686 1.493 28.999 34.640 1.00 45.74 P
ATOM 3 OP1 A A2686 0.371 28.270 33.991 1.00 45.96 O
ATOM 4 OP2 A A2686 1.190 29.978 35.725 1.00 45.82 O
ATOM 5 O5' A A2686 2.601 27.943 35.118 1.00 45.14 O
ATOM 6 C5' A A2686 2.954 26.862 34.261 1.00 45.00 C
ATOM 7 C4' A A2686 4.242 26.236 34.650 1.00 44.50 C
ATOM 8 O4' A A2686 5.293 27.220 34.562 1.00 44.52 O
ATOM 9 C3' A A2686 4.332 25.722 36.079 1.00 44.07 C
ATOM 10 O3' A A2686 3.764 24.442 36.232 1.00 43.88 O
ATOM 11 C2' A A2686 5.837 25.725 36.325 1.00 43.71 C
ATOM 12 O2' A A2686 6.440 24.583 35.731 1.00 43.47 O
ATOM 13 C1' A A2686 6.280 26.960 35.540 1.00 44.06 C
ATOM 14 N9 A A2686 6.412 28.137 36.412 1.00 44.13 N
ATOM 15 C8 A A2686 5.397 28.849 36.975 1.00 44.39 C
ATOM 16 N7 A A2686 5.800 29.841 37.737 1.00 44.40 N
ATOM 17 C5 A A2686 7.191 29.799 37.662 1.00 44.13 C
ATOM 18 C6 A A2686 8.210 30.597 38.230 1.00 44.02 C
ATOM 19 N6 A A2686 8.026 31.633 39.051 1.00 44.17 N
ATOM 20 N1 A A2686 9.469 30.243 37.925 1.00 43.75 N
ATOM 21 C2 A A2686 9.708 29.214 37.127 1.00 43.61 C
ATOM 22 N3 A A2686 8.861 28.411 36.527 1.00 43.69 N
ATOM 23 C4 A A2686 7.588 28.739 36.845 1.00 43.95 C
ATOM 24 P U A2687 2.286 24.263 36.786 1.00 50.39 P
ATOM 25 OP1 U A2687 1.805 22.923 36.332 1.00 50.31 O
ATOM 26 OP2 U A2687 1.557 25.448 36.398 1.00 50.88 O
ATOM 27 O5' U A2687 2.481 24.262 38.354 1.00 50.04 O
TER
ATOM 1 O3' C B2665 18.852 32.801 36.549 1.00 48.30 O
ATOM 2 P G B2666 18.574 32.146 37.964 1.00 47.22 P
ATOM 3 OP1 G B2666 18.708 33.224 38.958 1.00 47.31 O
ATOM 4 OP2 G B2666 19.429 30.911 38.076 1.00 46.77 O
ATOM 5 O5' G B2666 17.081 31.703 37.858 1.00 47.35 O
ATOM 6 C5' G B2666 16.306 31.502 39.013 1.00 47.22 C
ATOM 7 C4' G B2666 14.868 31.449 38.636 1.00 47.50 C
ATOM 8 O4' G B2666 14.749 31.092 37.245 1.00 47.68 O
ATOM 9 C3' G B2666 14.035 30.463 39.374 1.00 47.26 C
ATOM 10 O3' G B2666 13.568 31.042 40.543 1.00 47.28 O
ATOM 11 C2' G B2666 12.926 30.157 38.390 1.00 47.54 C
ATOM 12 O2' G B2666 11.969 31.196 38.439 1.00 47.95 O
ATOM 13 C1' G B2666 13.650 30.260 37.048 1.00 47.69 C
ATOM 14 N9 G B2666 14.169 28.967 36.533 1.00 47.39 N
ATOM 15 C8 G B2666 15.537 28.729 36.361 1.00 47.14 C
ATOM 16 N7 G B2666 15.831 27.571 35.860 1.00 46.93 N
ATOM 17 C5 G B2666 14.589 26.991 35.658 1.00 47.03 C
ATOM 18 C6 G B2666 14.268 25.711 35.164 1.00 46.90 C
ATOM 19 O6 G B2666 15.014 24.830 34.770 1.00 46.67 O
ATOM 20 N1 G B2666 12.902 25.502 35.136 1.00 47.09 N
ATOM 21 C2 G B2666 11.948 26.416 35.533 1.00 47.38 C
ATOM 22 N2 G B2666 10.669 26.050 35.401 1.00 47.55 N
ATOM 23 N3 G B2666 12.234 27.602 36.033 1.00 47.50 N
ATOM 24 C4 G B2666 13.557 27.833 36.053 1.00 47.32 C
ATOM 25 P U B2667 13.762 30.305 41.903 1.00 43.12 P
ATOM 26 OP1 U B2667 13.299 31.206 42.966 1.00 43.26 O
ATOM 27 OP2 U B2667 15.148 29.807 41.943 1.00 42.77 O
ATOM 28 O5' U B2667 12.764 29.101 41.745 1.00 43.02 O
TER
ATOM 2 P A A2686 1.493 28.999 34.640 1.00 45.74 P
ATOM 3 OP1 A A2686 0.371 28.270 33.991 1.00 45.96 O
ATOM 4 OP2 A A2686 1.190 29.978 35.725 1.00 45.82 O
ATOM 5 O5' A A2686 2.601 27.943 35.118 1.00 45.14 O
ATOM 6 C5' A A2686 2.954 26.862 34.261 1.00 45.00 C
ATOM 7 C4' A A2686 4.242 26.236 34.650 1.00 44.50 C
ATOM 8 O4' A A2686 5.293 27.220 34.562 1.00 44.52 O
ATOM 9 C3' A A2686 4.332 25.722 36.079 1.00 44.07 C
ATOM 10 O3' A A2686 3.764 24.442 36.232 1.00 43.88 O
ATOM 11 C2' A A2686 5.837 25.725 36.325 1.00 43.71 C
ATOM 12 O2' A A2686 6.440 24.583 35.731 1.00 43.47 O
ATOM 13 C1' A A2686 6.280 26.960 35.540 1.00 44.06 C
ATOM 14 N9 A A2686 6.412 28.137 36.412 1.00 44.13 N
ATOM 15 C8 A A2686 5.397 28.849 36.975 1.00 44.39 C
ATOM 16 N7 A A2686 5.800 29.841 37.737 1.00 44.40 N
ATOM 17 C5 A A2686 7.191 29.799 37.662 1.00 44.13 C
ATOM 18 C6 A A2686 8.210 30.597 38.230 1.00 44.02 C
ATOM 19 N6 A A2686 8.026 31.633 39.051 1.00 44.17 N
ATOM 20 N1 A A2686 9.469 30.243 37.925 1.00 43.75 N
ATOM 21 C2 A A2686 9.708 29.214 37.127 1.00 43.61 C
ATOM 22 N3 A A2686 8.861 28.411 36.527 1.00 43.69 N
ATOM 23 C4 A A2686 7.588 28.739 36.845 1.00 43.95 C
ATOM 24 P U A2687 2.286 24.263 36.786 1.00 50.39 P
ATOM 25 OP1 U A2687 1.805 22.923 36.332 1.00 50.31 O
ATOM 26 OP2 U A2687 1.557 25.448 36.398 1.00 50.88 O
ATOM 27 O5' U A2687 2.481 24.262 38.354 1.00 50.04 O
TER
ATOM 1 O3' C B2665 18.852 32.801 36.549 1.00 48.30 O
ATOM 2 P G B2666 18.574 32.146 37.964 1.00 47.22 P
ATOM 3 OP1 G B2666 18.708 33.224 38.958 1.00 47.31 O
ATOM 4 OP2 G B2666 19.429 30.911 38.076 1.00 46.77 O
ATOM 5 O5' G B2666 17.081 31.703 37.858 1.00 47.35 O
ATOM 6 C5' G B2666 16.306 31.502 39.013 1.00 47.22 C
ATOM 7 C4' G B2666 14.868 31.449 38.636 1.00 47.50 C
ATOM 8 O4' G B2666 14.749 31.092 37.245 1.00 47.68 O
ATOM 9 C3' G B2666 14.035 30.463 39.374 1.00 47.26 C
ATOM 10 O3' G B2666 13.568 31.042 40.543 1.00 47.28 O
ATOM 11 C2' G B2666 12.926 30.157 38.390 1.00 47.54 C
ATOM 12 O2' G B2666 11.969 31.196 38.439 1.00 47.95 O
ATOM 13 C1' G B2666 13.650 30.260 37.048 1.00 47.69 C
ATOM 14 N9 G B2666 14.169 28.967 36.533 1.00 47.39 N
ATOM 15 C8 G B2666 15.537 28.729 36.361 1.00 47.14 C
ATOM 16 N7 G B2666 15.831 27.571 35.860 1.00 46.93 N
ATOM 17 C5 G B2666 14.589 26.991 35.658 1.00 47.03 C
ATOM 18 C6 G B2666 14.268 25.711 35.164 1.00 46.90 C
ATOM 19 O6 G B2666 15.014 24.830 34.770 1.00 46.67 O
ATOM 20 N1 G B2666 12.902 25.502 35.136 1.00 47.09 N
ATOM 21 C2 G B2666 11.948 26.416 35.533 1.00 47.38 C
ATOM 22 N2 G B2666 10.669 26.050 35.401 1.00 47.55 N
ATOM 23 N3 G B2666 12.234 27.602 36.033 1.00 47.50 N
ATOM 24 C4 G B2666 13.557 27.833 36.053 1.00 47.32 C
ATOM 25 P U B2667 13.762 30.305 41.903 1.00 43.12 P
ATOM 26 OP1 U B2667 13.299 31.206 42.966 1.00 43.26 O
ATOM 27 OP2 U B2667 15.148 29.807 41.943 1.00 42.77 O
ATOM 28 O5' U B2667 12.764 29.101 41.745 1.00 43.02 O
TER
Atoms:
OP1: (0.371,28.270,33.991)
OP2: (1.190,29.978,35.725)
C3': (4.332,25.722,36.079)
C1': (6.280,26.960,35.540)
C5': (2.954,26.862,34.261)
O4': (5.293,27.220,34.562)
C8: (5.397,28.849,36.975)
O2': (6.440,24.583,35.731)
C6: (8.210,30.597,38.230)
C5: (7.191,29.799,37.662)
C4: (7.588,28.739,36.845)
P: (1.493,28.999,34.640)
C4': (4.242,26.236,34.650)
C2': (5.837,25.725,36.325)
C2: (9.708,29.214,37.127)
N1: (9.469,30.243,37.925)
N3: (8.861,28.411,36.527)
N6: (8.026,31.633,39.051)
N7: (5.800,29.841,37.737)
N9: (6.412,28.137,36.412)
O5': (2.601,27.943,35.118)
O3': (3.764,24.442,36.232)
OP2: (1.190,29.978,35.725)
C3': (4.332,25.722,36.079)
C1': (6.280,26.960,35.540)
C5': (2.954,26.862,34.261)
O4': (5.293,27.220,34.562)
C8: (5.397,28.849,36.975)
O2': (6.440,24.583,35.731)
C6: (8.210,30.597,38.230)
C5: (7.191,29.799,37.662)
C4: (7.588,28.739,36.845)
P: (1.493,28.999,34.640)
C4': (4.242,26.236,34.650)
C2': (5.837,25.725,36.325)
C2: (9.708,29.214,37.127)
N1: (9.469,30.243,37.925)
N3: (8.861,28.411,36.527)
N6: (8.026,31.633,39.051)
N7: (5.800,29.841,37.737)
N9: (6.412,28.137,36.412)
O5': (2.601,27.943,35.118)
O3': (3.764,24.442,36.232)
OP1: (18.708,33.224,38.958)
OP2: (19.429,30.911,38.076)
C3': (14.035,30.463,39.374)
C1': (13.650,30.260,37.048)
C5': (16.306,31.502,39.013)
O6: (15.014,24.830,34.770)
O4': (14.749,31.092,37.245)
C8: (15.537,28.729,36.361)
C2: (11.948,26.416,35.533)
C6: (14.268,25.711,35.164)
C5: (14.589,26.991,35.658)
C4: (13.557,27.833,36.053)
P: (18.574,32.146,37.964)
C4': (14.868,31.449,38.636)
C2': (12.926,30.157,38.390)
O2': (11.969,31.196,38.439)
N1: (12.902,25.502,35.136)
N2: (10.669,26.050,35.401)
N3: (12.234,27.602,36.033)
N7: (15.831,27.571,35.860)
N9: (14.169,28.967,36.533)
O5': (17.081,31.703,37.858)
O3': (13.568,31.042,40.543)
OP2: (19.429,30.911,38.076)
C3': (14.035,30.463,39.374)
C1': (13.650,30.260,37.048)
C5': (16.306,31.502,39.013)
O6: (15.014,24.830,34.770)
O4': (14.749,31.092,37.245)
C8: (15.537,28.729,36.361)
C2: (11.948,26.416,35.533)
C6: (14.268,25.711,35.164)
C5: (14.589,26.991,35.658)
C4: (13.557,27.833,36.053)
P: (18.574,32.146,37.964)
C4': (14.868,31.449,38.636)
C2': (12.926,30.157,38.390)
O2': (11.969,31.196,38.439)
N1: (12.902,25.502,35.136)
N2: (10.669,26.050,35.401)
N3: (12.234,27.602,36.033)
N7: (15.831,27.571,35.860)
N9: (14.169,28.967,36.533)
O5': (17.081,31.703,37.858)
O3': (13.568,31.042,40.543)
Image (generated by PyMOL):