Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ8:0540:01282
Extra
PDB:
ATOM 1 O3' A A 539 -0.593 129.540 73.158 1.00 43.70 O
ATOM 2 P A A 540 -1.104 128.153 73.778 1.00 43.28 P
ATOM 3 OP1 A A 540 -2.222 127.697 72.909 1.00 45.35 O
ATOM 4 OP2 A A 540 -1.327 128.334 75.239 1.00 43.11 O
ATOM 5 O5' A A 540 0.118 127.160 73.585 1.00 42.55 O
ATOM 6 C5' A A 540 0.587 126.830 72.271 1.00 43.39 C
ATOM 7 C4' A A 540 2.072 126.565 72.300 1.00 42.11 C
ATOM 8 O4' A A 540 2.767 127.771 72.726 1.00 42.19 O
ATOM 9 C3' A A 540 2.545 125.510 73.287 1.00 41.63 C
ATOM 10 O3' A A 540 2.361 124.194 72.780 1.00 43.99 O
ATOM 11 C2' A A 540 4.011 125.886 73.455 1.00 39.12 C
ATOM 12 O2' A A 540 4.811 125.476 72.363 1.00 39.35 O
ATOM 13 C1' A A 540 3.919 127.413 73.474 1.00 38.61 C
ATOM 14 N9 A A 540 3.751 127.905 74.841 1.00 39.61 N
ATOM 15 C8 A A 540 2.680 127.717 75.688 1.00 37.28 C
ATOM 16 N7 A A 540 2.865 128.210 76.888 1.00 37.64 N
ATOM 17 C5 A A 540 4.132 128.776 76.824 1.00 37.15 C
ATOM 18 C6 A A 540 4.917 129.440 77.772 1.00 36.98 C
ATOM 19 N6 A A 540 4.547 129.652 79.034 1.00 35.81 N
ATOM 20 N1 A A 540 6.125 129.887 77.379 1.00 39.23 N
ATOM 21 C2 A A 540 6.512 129.672 76.116 1.00 37.40 C
ATOM 22 N3 A A 540 5.872 129.054 75.140 1.00 37.86 N
ATOM 23 C4 A A 540 4.675 128.620 75.562 1.00 37.73 C
ATOM 24 P G A 541 2.583 122.926 73.741 1.00 44.24 P
ATOM 25 OP1 G A 541 3.893 123.085 74.380 1.00 50.19 O
ATOM 26 OP2 G A 541 2.305 121.699 72.967 1.00 50.50 O
ATOM 27 O5' G A 541 1.451 123.049 74.859 1.00 49.27 O
TER
ATOM 1 O3' G B1281 14.595 132.849 80.359 1.00 41.34 O
ATOM 2 P G B1282 14.601 131.283 80.735 1.00 45.97 P
ATOM 3 OP1 G B1282 14.723 131.204 82.213 1.00 46.13 O
ATOM 4 OP2 G B1282 15.568 130.543 79.866 1.00 41.95 O
ATOM 5 O5' G B1282 13.154 130.756 80.303 1.00 47.80 O
ATOM 6 C5' G B1282 11.965 131.277 80.916 1.00 44.84 C
ATOM 7 C4' G B1282 10.764 131.030 80.033 1.00 44.01 C
ATOM 8 O4' G B1282 11.024 131.545 78.692 1.00 42.70 O
ATOM 9 C3' G B1282 10.357 129.592 79.746 1.00 41.51 C
ATOM 10 O3' G B1282 9.670 128.966 80.823 1.00 40.31 O
ATOM 11 C2' G B1282 9.434 129.808 78.560 1.00 40.60 C
ATOM 12 O2' G B1282 8.227 130.436 78.951 1.00 40.71 O
ATOM 13 C1' G B1282 10.257 130.806 77.746 1.00 39.62 C
ATOM 14 N9 G B1282 11.163 130.068 76.869 1.00 35.82 N
ATOM 15 C8 G B1282 12.527 129.935 76.981 1.00 34.33 C
ATOM 16 N7 G B1282 13.039 129.134 76.087 1.00 32.33 N
ATOM 17 C5 G B1282 11.949 128.728 75.324 1.00 33.06 C
ATOM 18 C6 G B1282 11.874 127.837 74.206 1.00 32.84 C
ATOM 19 O6 G B1282 12.789 127.212 73.646 1.00 34.21 O
ATOM 20 N1 G B1282 10.569 127.703 73.748 1.00 32.25 N
ATOM 21 C2 G B1282 9.473 128.332 74.288 1.00 31.79 C
ATOM 22 N2 G B1282 8.288 128.041 73.730 1.00 33.81 N
ATOM 23 N3 G B1282 9.528 129.171 75.308 1.00 33.03 N
ATOM 24 C4 G B1282 10.789 129.314 75.780 1.00 34.32 C
ATOM 25 P G B1283 9.794 127.369 81.027 1.00 40.41 P
ATOM 26 OP1 G B1283 9.393 127.122 82.440 1.00 40.38 O
ATOM 27 OP2 G B1283 11.115 126.911 80.549 1.00 39.59 O
ATOM 28 O5' G B1283 8.700 126.728 80.046 1.00 43.04 O
TER
ATOM 2 P A A 540 -1.104 128.153 73.778 1.00 43.28 P
ATOM 3 OP1 A A 540 -2.222 127.697 72.909 1.00 45.35 O
ATOM 4 OP2 A A 540 -1.327 128.334 75.239 1.00 43.11 O
ATOM 5 O5' A A 540 0.118 127.160 73.585 1.00 42.55 O
ATOM 6 C5' A A 540 0.587 126.830 72.271 1.00 43.39 C
ATOM 7 C4' A A 540 2.072 126.565 72.300 1.00 42.11 C
ATOM 8 O4' A A 540 2.767 127.771 72.726 1.00 42.19 O
ATOM 9 C3' A A 540 2.545 125.510 73.287 1.00 41.63 C
ATOM 10 O3' A A 540 2.361 124.194 72.780 1.00 43.99 O
ATOM 11 C2' A A 540 4.011 125.886 73.455 1.00 39.12 C
ATOM 12 O2' A A 540 4.811 125.476 72.363 1.00 39.35 O
ATOM 13 C1' A A 540 3.919 127.413 73.474 1.00 38.61 C
ATOM 14 N9 A A 540 3.751 127.905 74.841 1.00 39.61 N
ATOM 15 C8 A A 540 2.680 127.717 75.688 1.00 37.28 C
ATOM 16 N7 A A 540 2.865 128.210 76.888 1.00 37.64 N
ATOM 17 C5 A A 540 4.132 128.776 76.824 1.00 37.15 C
ATOM 18 C6 A A 540 4.917 129.440 77.772 1.00 36.98 C
ATOM 19 N6 A A 540 4.547 129.652 79.034 1.00 35.81 N
ATOM 20 N1 A A 540 6.125 129.887 77.379 1.00 39.23 N
ATOM 21 C2 A A 540 6.512 129.672 76.116 1.00 37.40 C
ATOM 22 N3 A A 540 5.872 129.054 75.140 1.00 37.86 N
ATOM 23 C4 A A 540 4.675 128.620 75.562 1.00 37.73 C
ATOM 24 P G A 541 2.583 122.926 73.741 1.00 44.24 P
ATOM 25 OP1 G A 541 3.893 123.085 74.380 1.00 50.19 O
ATOM 26 OP2 G A 541 2.305 121.699 72.967 1.00 50.50 O
ATOM 27 O5' G A 541 1.451 123.049 74.859 1.00 49.27 O
TER
ATOM 1 O3' G B1281 14.595 132.849 80.359 1.00 41.34 O
ATOM 2 P G B1282 14.601 131.283 80.735 1.00 45.97 P
ATOM 3 OP1 G B1282 14.723 131.204 82.213 1.00 46.13 O
ATOM 4 OP2 G B1282 15.568 130.543 79.866 1.00 41.95 O
ATOM 5 O5' G B1282 13.154 130.756 80.303 1.00 47.80 O
ATOM 6 C5' G B1282 11.965 131.277 80.916 1.00 44.84 C
ATOM 7 C4' G B1282 10.764 131.030 80.033 1.00 44.01 C
ATOM 8 O4' G B1282 11.024 131.545 78.692 1.00 42.70 O
ATOM 9 C3' G B1282 10.357 129.592 79.746 1.00 41.51 C
ATOM 10 O3' G B1282 9.670 128.966 80.823 1.00 40.31 O
ATOM 11 C2' G B1282 9.434 129.808 78.560 1.00 40.60 C
ATOM 12 O2' G B1282 8.227 130.436 78.951 1.00 40.71 O
ATOM 13 C1' G B1282 10.257 130.806 77.746 1.00 39.62 C
ATOM 14 N9 G B1282 11.163 130.068 76.869 1.00 35.82 N
ATOM 15 C8 G B1282 12.527 129.935 76.981 1.00 34.33 C
ATOM 16 N7 G B1282 13.039 129.134 76.087 1.00 32.33 N
ATOM 17 C5 G B1282 11.949 128.728 75.324 1.00 33.06 C
ATOM 18 C6 G B1282 11.874 127.837 74.206 1.00 32.84 C
ATOM 19 O6 G B1282 12.789 127.212 73.646 1.00 34.21 O
ATOM 20 N1 G B1282 10.569 127.703 73.748 1.00 32.25 N
ATOM 21 C2 G B1282 9.473 128.332 74.288 1.00 31.79 C
ATOM 22 N2 G B1282 8.288 128.041 73.730 1.00 33.81 N
ATOM 23 N3 G B1282 9.528 129.171 75.308 1.00 33.03 N
ATOM 24 C4 G B1282 10.789 129.314 75.780 1.00 34.32 C
ATOM 25 P G B1283 9.794 127.369 81.027 1.00 40.41 P
ATOM 26 OP1 G B1283 9.393 127.122 82.440 1.00 40.38 O
ATOM 27 OP2 G B1283 11.115 126.911 80.549 1.00 39.59 O
ATOM 28 O5' G B1283 8.700 126.728 80.046 1.00 43.04 O
TER
Atoms:
OP1: (-2.222,127.697,72.909)
OP2: (-1.327,128.334,75.239)
C3': (2.545,125.510,73.287)
C1': (3.919,127.413,73.474)
C5': (0.587,126.830,72.271)
O4': (2.767,127.771,72.726)
C8: (2.680,127.717,75.688)
O2': (4.811,125.476,72.363)
C6: (4.917,129.440,77.772)
C5: (4.132,128.776,76.824)
C4: (4.675,128.620,75.562)
P: (-1.104,128.153,73.778)
C4': (2.072,126.565,72.300)
C2': (4.011,125.886,73.455)
C2: (6.512,129.672,76.116)
N1: (6.125,129.887,77.379)
N3: (5.872,129.054,75.140)
N6: (4.547,129.652,79.034)
N7: (2.865,128.210,76.888)
N9: (3.751,127.905,74.841)
O5': (0.118,127.160,73.585)
O3': (2.361,124.194,72.780)
OP2: (-1.327,128.334,75.239)
C3': (2.545,125.510,73.287)
C1': (3.919,127.413,73.474)
C5': (0.587,126.830,72.271)
O4': (2.767,127.771,72.726)
C8: (2.680,127.717,75.688)
O2': (4.811,125.476,72.363)
C6: (4.917,129.440,77.772)
C5: (4.132,128.776,76.824)
C4: (4.675,128.620,75.562)
P: (-1.104,128.153,73.778)
C4': (2.072,126.565,72.300)
C2': (4.011,125.886,73.455)
C2: (6.512,129.672,76.116)
N1: (6.125,129.887,77.379)
N3: (5.872,129.054,75.140)
N6: (4.547,129.652,79.034)
N7: (2.865,128.210,76.888)
N9: (3.751,127.905,74.841)
O5': (0.118,127.160,73.585)
O3': (2.361,124.194,72.780)
OP1: (14.723,131.204,82.213)
OP2: (15.568,130.543,79.866)
C3': (10.357,129.592,79.746)
C1': (10.257,130.806,77.746)
C5': (11.965,131.277,80.916)
O6: (12.789,127.212,73.646)
O4': (11.024,131.545,78.692)
C8: (12.527,129.935,76.981)
C2: (9.473,128.332,74.288)
C6: (11.874,127.837,74.206)
C5: (11.949,128.728,75.324)
C4: (10.789,129.314,75.780)
P: (14.601,131.283,80.735)
C4': (10.764,131.030,80.033)
C2': (9.434,129.808,78.560)
O2': (8.227,130.436,78.951)
N1: (10.569,127.703,73.748)
N2: (8.288,128.041,73.730)
N3: (9.528,129.171,75.308)
N7: (13.039,129.134,76.087)
N9: (11.163,130.068,76.869)
O5': (13.154,130.756,80.303)
O3': (9.670,128.966,80.823)
OP2: (15.568,130.543,79.866)
C3': (10.357,129.592,79.746)
C1': (10.257,130.806,77.746)
C5': (11.965,131.277,80.916)
O6: (12.789,127.212,73.646)
O4': (11.024,131.545,78.692)
C8: (12.527,129.935,76.981)
C2: (9.473,128.332,74.288)
C6: (11.874,127.837,74.206)
C5: (11.949,128.728,75.324)
C4: (10.789,129.314,75.780)
P: (14.601,131.283,80.735)
C4': (10.764,131.030,80.033)
C2': (9.434,129.808,78.560)
O2': (8.227,130.436,78.951)
N1: (10.569,127.703,73.748)
N2: (8.288,128.041,73.730)
N3: (9.528,129.171,75.308)
N7: (13.039,129.134,76.087)
N9: (11.163,130.068,76.869)
O5': (13.154,130.756,80.303)
O3': (9.670,128.966,80.823)
Image (generated by PyMOL):