Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2V:A43:A8
Extra
PDB:
ATOM 1 O3' A A 42 -5.569 6.617 -18.040 1.00 27.12 O
ATOM 2 P A A 43 -6.541 6.303 -19.273 1.00 29.02 P
ATOM 3 OP1 A A 43 -6.590 4.836 -19.471 1.00 32.05 O
ATOM 4 OP2 A A 43 -6.128 7.188 -20.382 1.00 27.01 O
ATOM 5 O5' A A 43 -7.977 6.766 -18.756 1.00 27.88 O
ATOM 6 C5' A A 43 -8.207 8.146 -18.502 1.00 26.66 C
ATOM 7 C4' A A 43 -9.616 8.521 -18.917 1.00 26.60 C
ATOM 8 O4' A A 43 -10.562 7.711 -18.176 1.00 26.80 O
ATOM 9 C3' A A 43 -10.006 9.961 -18.617 1.00 25.28 C
ATOM 10 O3' A A 43 -9.604 10.806 -19.693 1.00 25.07 O
ATOM 11 C2' A A 43 -11.523 9.843 -18.533 1.00 27.36 C
ATOM 12 O2' A A 43 -12.123 9.798 -19.814 1.00 27.28 O
ATOM 13 C1' A A 43 -11.702 8.487 -17.857 1.00 26.58 C
ATOM 14 N9 A A 43 -11.849 8.509 -16.401 1.00 28.60 N
ATOM 15 C8 A A 43 -11.025 7.901 -15.495 1.00 25.68 C
ATOM 16 N7 A A 43 -11.392 8.068 -14.247 1.00 26.49 N
ATOM 17 C5 A A 43 -12.538 8.837 -14.340 1.00 24.35 C
ATOM 18 C6 A A 43 -13.406 9.355 -13.360 1.00 25.79 C
ATOM 19 N6 A A 43 -13.224 9.150 -12.053 1.00 23.85 N
ATOM 20 N1 A A 43 -14.461 10.086 -13.780 1.00 24.15 N
ATOM 21 C2 A A 43 -14.626 10.278 -15.096 1.00 26.26 C
ATOM 22 N3 A A 43 -13.876 9.843 -16.110 1.00 25.89 N
ATOM 23 C4 A A 43 -12.836 9.122 -15.660 1.00 24.44 C
ATOM 24 P C A 44 -8.467 11.919 -19.500 1.00 29.20 P
ATOM 25 OP1 C A 44 -8.465 12.825 -20.664 1.00 25.26 O
ATOM 26 OP2 C A 44 -7.228 11.245 -19.052 1.00 23.21 O
ATOM 27 O5' C A 44 -9.061 12.802 -18.326 1.00 29.95 O
TER
ATOM 1 O3' G B 7 -24.076 11.599 -12.014 1.00 36.51 O
ATOM 2 P G B 8 -23.243 12.881 -12.496 1.00 36.60 P
ATOM 3 OP1 G B 8 -23.194 13.841 -11.373 1.00 36.51 O
ATOM 4 OP2 G B 8 -23.766 13.299 -13.812 1.00 30.74 O
ATOM 5 O5' G B 8 -21.767 12.296 -12.698 1.00 35.64 O
ATOM 6 C5' G B 8 -21.020 11.853 -11.573 1.00 31.11 C
ATOM 7 C4' G B 8 -19.626 11.430 -12.000 1.00 32.58 C
ATOM 8 O4' G B 8 -19.725 10.334 -12.944 1.00 33.15 O
ATOM 9 C3' G B 8 -18.824 12.487 -12.746 1.00 30.32 C
ATOM 10 O3' G B 8 -18.183 13.359 -11.831 1.00 30.24 O
ATOM 11 C2' G B 8 -17.809 11.607 -13.462 1.00 29.54 C
ATOM 12 O2' G B 8 -16.816 11.118 -12.584 1.00 29.00 O
ATOM 13 C1' G B 8 -18.704 10.461 -13.913 1.00 27.72 C
ATOM 14 N9 G B 8 -19.322 10.706 -15.209 1.00 27.04 N
ATOM 15 C8 G B 8 -20.640 10.984 -15.467 1.00 29.50 C
ATOM 16 N7 G B 8 -20.891 11.155 -16.734 1.00 29.84 N
ATOM 17 C5 G B 8 -19.662 10.980 -17.354 1.00 29.11 C
ATOM 18 C6 G B 8 -19.313 11.048 -18.723 1.00 32.71 C
ATOM 19 O6 G B 8 -20.050 11.283 -19.690 1.00 34.32 O
ATOM 20 N1 G B 8 -17.954 10.807 -18.921 1.00 28.93 N
ATOM 21 C2 G B 8 -17.051 10.539 -17.918 1.00 29.55 C
ATOM 22 N2 G B 8 -15.782 10.337 -18.302 1.00 28.59 N
ATOM 23 N3 G B 8 -17.366 10.474 -16.630 1.00 25.75 N
ATOM 24 C4 G B 8 -18.685 10.704 -16.427 1.00 28.75 C
ATOM 25 P G B 9 -17.935 14.886 -12.235 1.00 36.11 P
ATOM 26 OP1 G B 9 -17.262 15.534 -11.091 1.00 34.41 O
ATOM 27 OP2 G B 9 -19.196 15.443 -12.768 1.00 29.47 O
ATOM 28 O5' G B 9 -16.890 14.778 -13.442 1.00 31.50 O
TER
ATOM 2 P A A 43 -6.541 6.303 -19.273 1.00 29.02 P
ATOM 3 OP1 A A 43 -6.590 4.836 -19.471 1.00 32.05 O
ATOM 4 OP2 A A 43 -6.128 7.188 -20.382 1.00 27.01 O
ATOM 5 O5' A A 43 -7.977 6.766 -18.756 1.00 27.88 O
ATOM 6 C5' A A 43 -8.207 8.146 -18.502 1.00 26.66 C
ATOM 7 C4' A A 43 -9.616 8.521 -18.917 1.00 26.60 C
ATOM 8 O4' A A 43 -10.562 7.711 -18.176 1.00 26.80 O
ATOM 9 C3' A A 43 -10.006 9.961 -18.617 1.00 25.28 C
ATOM 10 O3' A A 43 -9.604 10.806 -19.693 1.00 25.07 O
ATOM 11 C2' A A 43 -11.523 9.843 -18.533 1.00 27.36 C
ATOM 12 O2' A A 43 -12.123 9.798 -19.814 1.00 27.28 O
ATOM 13 C1' A A 43 -11.702 8.487 -17.857 1.00 26.58 C
ATOM 14 N9 A A 43 -11.849 8.509 -16.401 1.00 28.60 N
ATOM 15 C8 A A 43 -11.025 7.901 -15.495 1.00 25.68 C
ATOM 16 N7 A A 43 -11.392 8.068 -14.247 1.00 26.49 N
ATOM 17 C5 A A 43 -12.538 8.837 -14.340 1.00 24.35 C
ATOM 18 C6 A A 43 -13.406 9.355 -13.360 1.00 25.79 C
ATOM 19 N6 A A 43 -13.224 9.150 -12.053 1.00 23.85 N
ATOM 20 N1 A A 43 -14.461 10.086 -13.780 1.00 24.15 N
ATOM 21 C2 A A 43 -14.626 10.278 -15.096 1.00 26.26 C
ATOM 22 N3 A A 43 -13.876 9.843 -16.110 1.00 25.89 N
ATOM 23 C4 A A 43 -12.836 9.122 -15.660 1.00 24.44 C
ATOM 24 P C A 44 -8.467 11.919 -19.500 1.00 29.20 P
ATOM 25 OP1 C A 44 -8.465 12.825 -20.664 1.00 25.26 O
ATOM 26 OP2 C A 44 -7.228 11.245 -19.052 1.00 23.21 O
ATOM 27 O5' C A 44 -9.061 12.802 -18.326 1.00 29.95 O
TER
ATOM 1 O3' G B 7 -24.076 11.599 -12.014 1.00 36.51 O
ATOM 2 P G B 8 -23.243 12.881 -12.496 1.00 36.60 P
ATOM 3 OP1 G B 8 -23.194 13.841 -11.373 1.00 36.51 O
ATOM 4 OP2 G B 8 -23.766 13.299 -13.812 1.00 30.74 O
ATOM 5 O5' G B 8 -21.767 12.296 -12.698 1.00 35.64 O
ATOM 6 C5' G B 8 -21.020 11.853 -11.573 1.00 31.11 C
ATOM 7 C4' G B 8 -19.626 11.430 -12.000 1.00 32.58 C
ATOM 8 O4' G B 8 -19.725 10.334 -12.944 1.00 33.15 O
ATOM 9 C3' G B 8 -18.824 12.487 -12.746 1.00 30.32 C
ATOM 10 O3' G B 8 -18.183 13.359 -11.831 1.00 30.24 O
ATOM 11 C2' G B 8 -17.809 11.607 -13.462 1.00 29.54 C
ATOM 12 O2' G B 8 -16.816 11.118 -12.584 1.00 29.00 O
ATOM 13 C1' G B 8 -18.704 10.461 -13.913 1.00 27.72 C
ATOM 14 N9 G B 8 -19.322 10.706 -15.209 1.00 27.04 N
ATOM 15 C8 G B 8 -20.640 10.984 -15.467 1.00 29.50 C
ATOM 16 N7 G B 8 -20.891 11.155 -16.734 1.00 29.84 N
ATOM 17 C5 G B 8 -19.662 10.980 -17.354 1.00 29.11 C
ATOM 18 C6 G B 8 -19.313 11.048 -18.723 1.00 32.71 C
ATOM 19 O6 G B 8 -20.050 11.283 -19.690 1.00 34.32 O
ATOM 20 N1 G B 8 -17.954 10.807 -18.921 1.00 28.93 N
ATOM 21 C2 G B 8 -17.051 10.539 -17.918 1.00 29.55 C
ATOM 22 N2 G B 8 -15.782 10.337 -18.302 1.00 28.59 N
ATOM 23 N3 G B 8 -17.366 10.474 -16.630 1.00 25.75 N
ATOM 24 C4 G B 8 -18.685 10.704 -16.427 1.00 28.75 C
ATOM 25 P G B 9 -17.935 14.886 -12.235 1.00 36.11 P
ATOM 26 OP1 G B 9 -17.262 15.534 -11.091 1.00 34.41 O
ATOM 27 OP2 G B 9 -19.196 15.443 -12.768 1.00 29.47 O
ATOM 28 O5' G B 9 -16.890 14.778 -13.442 1.00 31.50 O
TER
Atoms:
OP1: (-6.590,4.836,-19.471)
OP2: (-6.128,7.188,-20.382)
C3': (-10.006,9.961,-18.617)
C1': (-11.702,8.487,-17.857)
C5': (-8.207,8.146,-18.502)
O4': (-10.562,7.711,-18.176)
C8: (-11.025,7.901,-15.495)
O2': (-12.123,9.798,-19.814)
C6: (-13.406,9.355,-13.360)
C5: (-12.538,8.837,-14.340)
C4: (-12.836,9.122,-15.660)
P: (-6.541,6.303,-19.273)
C4': (-9.616,8.521,-18.917)
C2': (-11.523,9.843,-18.533)
C2: (-14.626,10.278,-15.096)
N1: (-14.461,10.086,-13.780)
N3: (-13.876,9.843,-16.110)
N6: (-13.224,9.150,-12.053)
N7: (-11.392,8.068,-14.247)
N9: (-11.849,8.509,-16.401)
O5': (-7.977,6.766,-18.756)
O3': (-9.604,10.806,-19.693)
OP2: (-6.128,7.188,-20.382)
C3': (-10.006,9.961,-18.617)
C1': (-11.702,8.487,-17.857)
C5': (-8.207,8.146,-18.502)
O4': (-10.562,7.711,-18.176)
C8: (-11.025,7.901,-15.495)
O2': (-12.123,9.798,-19.814)
C6: (-13.406,9.355,-13.360)
C5: (-12.538,8.837,-14.340)
C4: (-12.836,9.122,-15.660)
P: (-6.541,6.303,-19.273)
C4': (-9.616,8.521,-18.917)
C2': (-11.523,9.843,-18.533)
C2: (-14.626,10.278,-15.096)
N1: (-14.461,10.086,-13.780)
N3: (-13.876,9.843,-16.110)
N6: (-13.224,9.150,-12.053)
N7: (-11.392,8.068,-14.247)
N9: (-11.849,8.509,-16.401)
O5': (-7.977,6.766,-18.756)
O3': (-9.604,10.806,-19.693)
OP1: (-23.194,13.841,-11.373)
OP2: (-23.766,13.299,-13.812)
C3': (-18.824,12.487,-12.746)
C1': (-18.704,10.461,-13.913)
C5': (-21.020,11.853,-11.573)
O6: (-20.050,11.283,-19.690)
O4': (-19.725,10.334,-12.944)
C8: (-20.640,10.984,-15.467)
C2: (-17.051,10.539,-17.918)
C6: (-19.313,11.048,-18.723)
C5: (-19.662,10.980,-17.354)
C4: (-18.685,10.704,-16.427)
P: (-23.243,12.881,-12.496)
C4': (-19.626,11.430,-12.000)
C2': (-17.809,11.607,-13.462)
O2': (-16.816,11.118,-12.584)
N1: (-17.954,10.807,-18.921)
N2: (-15.782,10.337,-18.302)
N3: (-17.366,10.474,-16.630)
N7: (-20.891,11.155,-16.734)
N9: (-19.322,10.706,-15.209)
O5': (-21.767,12.296,-12.698)
O3': (-18.183,13.359,-11.831)
OP2: (-23.766,13.299,-13.812)
C3': (-18.824,12.487,-12.746)
C1': (-18.704,10.461,-13.913)
C5': (-21.020,11.853,-11.573)
O6: (-20.050,11.283,-19.690)
O4': (-19.725,10.334,-12.944)
C8: (-20.640,10.984,-15.467)
C2: (-17.051,10.539,-17.918)
C6: (-19.313,11.048,-18.723)
C5: (-19.662,10.980,-17.354)
C4: (-18.685,10.704,-16.427)
P: (-23.243,12.881,-12.496)
C4': (-19.626,11.430,-12.000)
C2': (-17.809,11.607,-13.462)
O2': (-16.816,11.118,-12.584)
N1: (-17.954,10.807,-18.921)
N2: (-15.782,10.337,-18.302)
N3: (-17.366,10.474,-16.630)
N7: (-20.891,11.155,-16.734)
N9: (-19.322,10.706,-15.209)
O5': (-21.767,12.296,-12.698)
O3': (-18.183,13.359,-11.831)
Image (generated by PyMOL):