Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1K8A:B2:B20
Extra
PDB:
ATOM 1 O3' U A 1 54.209 12.688 104.217 1.00120.49 O
ATOM 2 P A A 2 54.279 13.262 102.696 1.00114.38 P
ATOM 3 OP1 A A 2 52.837 13.300 102.354 1.00114.96 O
ATOM 4 OP2 A A 2 55.187 12.569 101.782 1.00114.79 O
ATOM 5 O5' A A 2 54.864 14.754 102.731 1.00108.61 O
ATOM 6 C5' A A 2 54.815 15.541 103.871 1.00 99.10 C
ATOM 7 C4' A A 2 56.086 16.463 104.079 1.00 91.75 C
ATOM 8 O4' A A 2 56.866 15.906 105.109 1.00 90.14 O
ATOM 9 C3' A A 2 57.079 16.771 102.995 1.00 87.20 C
ATOM 10 O3' A A 2 57.926 17.924 103.386 1.00 80.98 O
ATOM 11 C2' A A 2 57.868 15.446 103.076 1.00 87.33 C
ATOM 12 O2' A A 2 59.222 15.511 102.657 1.00 86.55 O
ATOM 13 C1' A A 2 57.914 15.165 104.574 1.00 89.07 C
ATOM 14 N9 A A 2 57.764 13.745 104.932 1.00 89.90 N
ATOM 15 C8 A A 2 57.477 12.725 104.069 1.00 89.63 C
ATOM 16 N7 A A 2 57.483 11.538 104.626 1.00 89.43 N
ATOM 17 C5 A A 2 57.773 11.790 105.958 1.00 89.97 C
ATOM 18 C6 A A 2 57.930 10.934 107.055 1.00 90.44 C
ATOM 19 N6 A A 2 57.829 9.605 106.954 1.00 92.47 N
ATOM 20 N1 A A 2 58.213 11.484 108.250 1.00 90.01 N
ATOM 21 C2 A A 2 58.336 12.815 108.329 1.00 89.51 C
ATOM 22 N3 A A 2 58.216 13.737 107.366 1.00 90.09 N
ATOM 23 C4 A A 2 57.938 13.149 106.175 1.00 90.05 C
ATOM 24 P G A 3 58.236 19.164 102.341 1.00 73.95 P
ATOM 25 OP1 G A 3 59.610 19.698 102.284 1.00 73.26 O
ATOM 26 OP2 G A 3 57.134 20.069 102.527 1.00 74.78 O
ATOM 27 O5' G A 3 58.111 18.512 100.914 1.00 71.64 O
TER
ATOM 1 O3' G B 19 58.272 11.466 118.256 1.00 78.26 O
ATOM 2 P G B 20 59.258 10.582 117.328 1.00 79.52 P
ATOM 3 OP1 G B 20 58.912 9.162 117.572 1.00 79.70 O
ATOM 4 OP2 G B 20 60.680 11.024 117.483 1.00 79.56 O
ATOM 5 O5' G B 20 58.802 10.927 115.849 1.00 80.13 O
ATOM 6 C5' G B 20 57.518 10.531 115.368 1.00 84.44 C
ATOM 7 C4' G B 20 57.443 10.776 113.885 1.00 87.79 C
ATOM 8 O4' G B 20 57.601 12.183 113.590 1.00 88.98 O
ATOM 9 C3' G B 20 58.572 10.125 113.129 1.00 89.81 C
ATOM 10 O3' G B 20 58.203 8.774 112.876 1.00 95.03 O
ATOM 11 C2' G B 20 58.634 10.941 111.846 1.00 88.95 C
ATOM 12 O2' G B 20 57.623 10.551 110.955 1.00 87.64 O
ATOM 13 C1' G B 20 58.334 12.339 112.384 1.00 88.15 C
ATOM 14 N9 G B 20 59.516 13.160 112.653 1.00 87.48 N
ATOM 15 C8 G B 20 60.298 13.148 113.782 1.00 87.15 C
ATOM 16 N7 G B 20 61.315 13.968 113.715 1.00 86.49 N
ATOM 17 C5 G B 20 61.193 14.570 112.470 1.00 86.72 C
ATOM 18 C6 G B 20 62.019 15.530 111.821 1.00 86.32 C
ATOM 19 O6 G B 20 63.060 16.052 112.226 1.00 87.03 O
ATOM 20 N1 G B 20 61.525 15.864 110.564 1.00 84.73 N
ATOM 21 C2 G B 20 60.398 15.342 109.995 1.00 84.41 C
ATOM 22 N2 G B 20 60.091 15.791 108.774 1.00 83.12 N
ATOM 23 N3 G B 20 59.626 14.442 110.579 1.00 85.50 N
ATOM 24 C4 G B 20 60.080 14.100 111.807 1.00 86.63 C
ATOM 25 P G B 21 59.363 7.688 112.767 1.00 97.65 P
ATOM 26 OP1 G B 21 59.252 6.888 114.033 1.00 98.39 O
ATOM 27 OP2 G B 21 60.636 8.423 112.495 1.00 97.23 O
ATOM 28 O5' G B 21 58.901 6.804 111.533 1.00 99.89 O
TER
ATOM 2 P A A 2 54.279 13.262 102.696 1.00114.38 P
ATOM 3 OP1 A A 2 52.837 13.300 102.354 1.00114.96 O
ATOM 4 OP2 A A 2 55.187 12.569 101.782 1.00114.79 O
ATOM 5 O5' A A 2 54.864 14.754 102.731 1.00108.61 O
ATOM 6 C5' A A 2 54.815 15.541 103.871 1.00 99.10 C
ATOM 7 C4' A A 2 56.086 16.463 104.079 1.00 91.75 C
ATOM 8 O4' A A 2 56.866 15.906 105.109 1.00 90.14 O
ATOM 9 C3' A A 2 57.079 16.771 102.995 1.00 87.20 C
ATOM 10 O3' A A 2 57.926 17.924 103.386 1.00 80.98 O
ATOM 11 C2' A A 2 57.868 15.446 103.076 1.00 87.33 C
ATOM 12 O2' A A 2 59.222 15.511 102.657 1.00 86.55 O
ATOM 13 C1' A A 2 57.914 15.165 104.574 1.00 89.07 C
ATOM 14 N9 A A 2 57.764 13.745 104.932 1.00 89.90 N
ATOM 15 C8 A A 2 57.477 12.725 104.069 1.00 89.63 C
ATOM 16 N7 A A 2 57.483 11.538 104.626 1.00 89.43 N
ATOM 17 C5 A A 2 57.773 11.790 105.958 1.00 89.97 C
ATOM 18 C6 A A 2 57.930 10.934 107.055 1.00 90.44 C
ATOM 19 N6 A A 2 57.829 9.605 106.954 1.00 92.47 N
ATOM 20 N1 A A 2 58.213 11.484 108.250 1.00 90.01 N
ATOM 21 C2 A A 2 58.336 12.815 108.329 1.00 89.51 C
ATOM 22 N3 A A 2 58.216 13.737 107.366 1.00 90.09 N
ATOM 23 C4 A A 2 57.938 13.149 106.175 1.00 90.05 C
ATOM 24 P G A 3 58.236 19.164 102.341 1.00 73.95 P
ATOM 25 OP1 G A 3 59.610 19.698 102.284 1.00 73.26 O
ATOM 26 OP2 G A 3 57.134 20.069 102.527 1.00 74.78 O
ATOM 27 O5' G A 3 58.111 18.512 100.914 1.00 71.64 O
TER
ATOM 1 O3' G B 19 58.272 11.466 118.256 1.00 78.26 O
ATOM 2 P G B 20 59.258 10.582 117.328 1.00 79.52 P
ATOM 3 OP1 G B 20 58.912 9.162 117.572 1.00 79.70 O
ATOM 4 OP2 G B 20 60.680 11.024 117.483 1.00 79.56 O
ATOM 5 O5' G B 20 58.802 10.927 115.849 1.00 80.13 O
ATOM 6 C5' G B 20 57.518 10.531 115.368 1.00 84.44 C
ATOM 7 C4' G B 20 57.443 10.776 113.885 1.00 87.79 C
ATOM 8 O4' G B 20 57.601 12.183 113.590 1.00 88.98 O
ATOM 9 C3' G B 20 58.572 10.125 113.129 1.00 89.81 C
ATOM 10 O3' G B 20 58.203 8.774 112.876 1.00 95.03 O
ATOM 11 C2' G B 20 58.634 10.941 111.846 1.00 88.95 C
ATOM 12 O2' G B 20 57.623 10.551 110.955 1.00 87.64 O
ATOM 13 C1' G B 20 58.334 12.339 112.384 1.00 88.15 C
ATOM 14 N9 G B 20 59.516 13.160 112.653 1.00 87.48 N
ATOM 15 C8 G B 20 60.298 13.148 113.782 1.00 87.15 C
ATOM 16 N7 G B 20 61.315 13.968 113.715 1.00 86.49 N
ATOM 17 C5 G B 20 61.193 14.570 112.470 1.00 86.72 C
ATOM 18 C6 G B 20 62.019 15.530 111.821 1.00 86.32 C
ATOM 19 O6 G B 20 63.060 16.052 112.226 1.00 87.03 O
ATOM 20 N1 G B 20 61.525 15.864 110.564 1.00 84.73 N
ATOM 21 C2 G B 20 60.398 15.342 109.995 1.00 84.41 C
ATOM 22 N2 G B 20 60.091 15.791 108.774 1.00 83.12 N
ATOM 23 N3 G B 20 59.626 14.442 110.579 1.00 85.50 N
ATOM 24 C4 G B 20 60.080 14.100 111.807 1.00 86.63 C
ATOM 25 P G B 21 59.363 7.688 112.767 1.00 97.65 P
ATOM 26 OP1 G B 21 59.252 6.888 114.033 1.00 98.39 O
ATOM 27 OP2 G B 21 60.636 8.423 112.495 1.00 97.23 O
ATOM 28 O5' G B 21 58.901 6.804 111.533 1.00 99.89 O
TER
Atoms:
OP1: (52.837,13.300,102.354)
OP2: (55.187,12.569,101.782)
C3': (57.079,16.771,102.995)
C1': (57.914,15.165,104.574)
C5': (54.815,15.541,103.871)
O4': (56.866,15.906,105.109)
C8: (57.477,12.725,104.069)
O2': (59.222,15.511,102.657)
C6: (57.930,10.934,107.055)
C5: (57.773,11.790,105.958)
C4: (57.938,13.149,106.175)
P: (54.279,13.262,102.696)
C4': (56.086,16.463,104.079)
C2': (57.868,15.446,103.076)
C2: (58.336,12.815,108.329)
N1: (58.213,11.484,108.250)
N3: (58.216,13.737,107.366)
N6: (57.829,9.605,106.954)
N7: (57.483,11.538,104.626)
N9: (57.764,13.745,104.932)
O5': (54.864,14.754,102.731)
O3': (57.926,17.924,103.386)
OP2: (55.187,12.569,101.782)
C3': (57.079,16.771,102.995)
C1': (57.914,15.165,104.574)
C5': (54.815,15.541,103.871)
O4': (56.866,15.906,105.109)
C8: (57.477,12.725,104.069)
O2': (59.222,15.511,102.657)
C6: (57.930,10.934,107.055)
C5: (57.773,11.790,105.958)
C4: (57.938,13.149,106.175)
P: (54.279,13.262,102.696)
C4': (56.086,16.463,104.079)
C2': (57.868,15.446,103.076)
C2: (58.336,12.815,108.329)
N1: (58.213,11.484,108.250)
N3: (58.216,13.737,107.366)
N6: (57.829,9.605,106.954)
N7: (57.483,11.538,104.626)
N9: (57.764,13.745,104.932)
O5': (54.864,14.754,102.731)
O3': (57.926,17.924,103.386)
OP1: (58.912,9.162,117.572)
OP2: (60.680,11.024,117.483)
C3': (58.572,10.125,113.129)
C1': (58.334,12.339,112.384)
C5': (57.518,10.531,115.368)
O6: (63.060,16.052,112.226)
O4': (57.601,12.183,113.590)
C8: (60.298,13.148,113.782)
C2: (60.398,15.342,109.995)
C6: (62.019,15.530,111.821)
C5: (61.193,14.570,112.470)
C4: (60.080,14.100,111.807)
P: (59.258,10.582,117.328)
C4': (57.443,10.776,113.885)
C2': (58.634,10.941,111.846)
O2': (57.623,10.551,110.955)
N1: (61.525,15.864,110.564)
N2: (60.091,15.791,108.774)
N3: (59.626,14.442,110.579)
N7: (61.315,13.968,113.715)
N9: (59.516,13.160,112.653)
O5': (58.802,10.927,115.849)
O3': (58.203,8.774,112.876)
OP2: (60.680,11.024,117.483)
C3': (58.572,10.125,113.129)
C1': (58.334,12.339,112.384)
C5': (57.518,10.531,115.368)
O6: (63.060,16.052,112.226)
O4': (57.601,12.183,113.590)
C8: (60.298,13.148,113.782)
C2: (60.398,15.342,109.995)
C6: (62.019,15.530,111.821)
C5: (61.193,14.570,112.470)
C4: (60.080,14.100,111.807)
P: (59.258,10.582,117.328)
C4': (57.443,10.776,113.885)
C2': (58.634,10.941,111.846)
O2': (57.623,10.551,110.955)
N1: (61.525,15.864,110.564)
N2: (60.091,15.791,108.774)
N3: (59.626,14.442,110.579)
N7: (61.315,13.968,113.715)
N9: (59.516,13.160,112.653)
O5': (58.802,10.927,115.849)
O3': (58.203,8.774,112.876)
Image (generated by PyMOL):