ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJW:01940:02425

Extra

PDB:
ATOM 1 O3' C A1939 93.777 133.552 132.837 1.00 35.39 O
ATOM 2 P A A1940 94.760 133.098 131.650 1.00 37.96 P
ATOM 3 OP1 A A1940 95.875 132.328 132.252 1.00 38.27 O
ATOM 4 OP2 A A1940 95.057 134.294 130.815 1.00 37.47 O
ATOM 5 O5' A A1940 93.893 132.081 130.788 1.00 37.37 O
ATOM 6 C5' A A1940 93.245 130.958 131.404 1.00 37.09 C
ATOM 7 C4' A A1940 91.915 130.696 130.741 1.00 37.58 C
ATOM 8 O4' A A1940 91.004 131.796 130.989 1.00 36.50 O
ATOM 9 C3' A A1940 91.959 130.588 129.228 1.00 37.13 C
ATOM 10 O3' A A1940 92.353 129.283 128.834 1.00 38.26 O
ATOM 11 C2' A A1940 90.521 130.890 128.835 1.00 36.79 C
ATOM 12 O2' A A1940 89.681 129.764 128.973 1.00 38.11 O
ATOM 13 C1' A A1940 90.133 131.940 129.881 1.00 36.73 C
ATOM 14 N9 A A1940 90.207 133.317 129.400 1.00 36.46 N
ATOM 15 C8 A A1940 91.319 134.044 129.056 1.00 36.32 C
ATOM 16 N7 A A1940 91.046 135.254 128.633 1.00 36.33 N
ATOM 17 C5 A A1940 89.662 135.329 128.704 1.00 34.26 C
ATOM 18 C6 A A1940 88.757 136.346 128.385 1.00 33.20 C
ATOM 19 N6 A A1940 89.120 137.530 127.896 1.00 35.19 N
ATOM 20 N1 A A1940 87.447 136.107 128.584 1.00 32.84 N
ATOM 21 C2 A A1940 87.081 134.919 129.063 1.00 33.90 C
ATOM 22 N3 A A1940 87.833 133.878 129.392 1.00 35.17 N
ATOM 23 C4 A A1940 89.133 134.151 129.186 1.00 35.63 C
ATOM 24 P G A1941 93.552 129.103 127.787 1.00 40.92 P
ATOM 25 OP1 G A1941 93.618 127.674 127.392 1.00 39.93 O
ATOM 26 OP2 G A1941 94.757 129.760 128.359 1.00 42.03 O
ATOM 27 O5' G A1941 93.062 129.947 126.531 1.00 40.44 O
TER

ATOM 1 O3' A B2424 77.877 139.033 127.538 1.00 32.97 O
ATOM 2 P G B2425 78.671 138.727 126.180 1.00 34.45 P
ATOM 3 OP1 G B2425 78.633 139.948 125.359 1.00 36.18 O
ATOM 4 OP2 G B2425 78.179 137.446 125.613 1.00 35.60 O
ATOM 5 O5' G B2425 80.174 138.524 126.654 1.00 34.46 O
ATOM 6 C5' G B2425 81.112 137.800 125.845 1.00 33.07 C
ATOM 7 C4' G B2425 82.364 137.534 126.636 1.00 32.86 C
ATOM 8 O4' G B2425 82.021 136.786 127.830 1.00 31.66 O
ATOM 9 C3' G B2425 83.401 136.671 125.945 1.00 33.07 C
ATOM 10 O3' G B2425 84.204 137.424 125.045 1.00 34.61 O
ATOM 11 C2' G B2425 84.182 136.111 127.124 1.00 32.98 C
ATOM 12 O2' G B2425 85.100 137.042 127.667 1.00 30.68 O
ATOM 13 C1' G B2425 83.054 135.863 128.129 1.00 33.15 C
ATOM 14 N9 G B2425 82.490 134.517 128.051 1.00 35.99 N
ATOM 15 C8 G B2425 81.209 134.173 127.681 1.00 36.49 C
ATOM 16 N7 G B2425 80.996 132.885 127.700 1.00 36.73 N
ATOM 17 C5 G B2425 82.208 132.341 128.108 1.00 36.77 C
ATOM 18 C6 G B2425 82.588 130.989 128.306 1.00 36.62 C
ATOM 19 O6 G B2425 81.903 129.967 128.165 1.00 36.84 O
ATOM 20 N1 G B2425 83.915 130.885 128.709 1.00 36.05 N
ATOM 21 C2 G B2425 84.769 131.943 128.901 1.00 35.97 C
ATOM 22 N2 G B2425 86.015 131.638 129.274 1.00 34.17 N
ATOM 23 N3 G B2425 84.426 133.207 128.732 1.00 36.17 N
ATOM 24 C4 G B2425 83.141 133.333 128.333 1.00 36.86 C
ATOM 25 P G B2426 84.805 136.712 123.735 1.00 36.43 P
ATOM 26 OP1 G B2426 85.402 137.761 122.871 1.00 35.64 O
ATOM 27 OP2 G B2426 83.759 135.816 123.180 1.00 37.52 O
ATOM 28 O5' G B2426 85.974 135.793 124.305 1.00 34.33 O
TER

Atoms:
OP1: (95.875,132.328,132.252)
OP2: (95.057,134.294,130.815)
C3': (91.959,130.588,129.228)
C1': (90.133,131.940,129.881)
C5': (93.245,130.958,131.404)
O4': (91.004,131.796,130.989)
C8: (91.319,134.044,129.056)
O2': (89.681,129.764,128.973)
C6: (88.757,136.346,128.385)
C5: (89.662,135.329,128.704)
C4: (89.133,134.151,129.186)
P: (94.760,133.098,131.650)
C4': (91.915,130.696,130.741)
C2': (90.521,130.890,128.835)
C2: (87.081,134.919,129.063)
N1: (87.447,136.107,128.584)
N3: (87.833,133.878,129.392)
N6: (89.120,137.530,127.896)
N7: (91.046,135.254,128.633)
N9: (90.207,133.317,129.400)
O5': (93.893,132.081,130.788)
O3': (92.353,129.283,128.834)
OP1: (78.633,139.948,125.359)
OP2: (78.179,137.446,125.613)
C3': (83.401,136.671,125.945)
C1': (83.054,135.863,128.129)
C5': (81.112,137.800,125.845)
O6: (81.903,129.967,128.165)
O4': (82.021,136.786,127.830)
C8: (81.209,134.173,127.681)
C2: (84.769,131.943,128.901)
C6: (82.588,130.989,128.306)
C5: (82.208,132.341,128.108)
C4: (83.141,133.333,128.333)
P: (78.671,138.727,126.180)
C4': (82.364,137.534,126.636)
C2': (84.182,136.111,127.124)
O2': (85.100,137.042,127.667)
N1: (83.915,130.885,128.709)
N2: (86.015,131.638,129.274)
N3: (84.426,133.207,128.732)
N7: (80.996,132.885,127.700)
N9: (82.490,134.517,128.051)
O5': (80.174,138.524,126.654)
O3': (84.204,137.424,125.045)
Image (generated by PyMOL):
PyMOL image
show in jmol