Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11114:11091
Extra
PDB:
ATOM 1 O3' A A1113 60.479 -12.206 22.935 1.00 34.68 O
ATOM 2 P A A1114 59.319 -11.602 22.020 1.00 37.20 P
ATOM 3 OP1 A A1114 58.561 -12.722 21.488 1.00 37.36 O
ATOM 4 OP2 A A1114 59.931 -10.635 21.055 1.00 37.45 O
ATOM 5 O5' A A1114 58.456 -10.823 23.082 1.00 36.86 O
ATOM 6 C5' A A1114 57.305 -11.375 23.624 1.00 36.70 C
ATOM 7 C4' A A1114 56.885 -10.573 24.792 1.00 36.36 C
ATOM 8 O4' A A1114 58.030 -10.363 25.643 1.00 36.19 O
ATOM 9 C3' A A1114 56.399 -9.181 24.482 1.00 36.39 C
ATOM 10 O3' A A1114 55.009 -9.159 24.123 1.00 36.43 O
ATOM 11 C2' A A1114 56.694 -8.452 25.772 1.00 36.07 C
ATOM 12 O2' A A1114 55.742 -8.817 26.732 1.00 35.81 O
ATOM 13 C1' A A1114 58.016 -9.067 26.173 1.00 36.03 C
ATOM 14 N9 A A1114 59.127 -8.292 25.605 1.00 36.20 N
ATOM 15 C8 A A1114 59.734 -8.436 24.373 1.00 36.53 C
ATOM 16 N7 A A1114 60.660 -7.534 24.130 1.00 36.62 N
ATOM 17 C5 A A1114 60.638 -6.732 25.264 1.00 36.34 C
ATOM 18 C6 A A1114 61.346 -5.601 25.574 1.00 36.30 C
ATOM 19 N6 A A1114 62.233 -5.087 24.729 1.00 36.55 N
ATOM 20 N1 A A1114 61.120 -5.049 26.786 1.00 36.00 N
ATOM 21 C2 A A1114 60.230 -5.567 27.650 1.00 35.76 C
ATOM 22 N3 A A1114 59.486 -6.639 27.455 1.00 35.77 N
ATOM 23 C4 A A1114 59.722 -7.171 26.208 1.00 36.07 C
ATOM 24 P G A1115 54.500 -8.330 22.831 1.00 38.64 P
ATOM 25 OP1 G A1115 53.021 -8.356 22.856 1.00 38.61 O
ATOM 26 OP2 G A1115 55.203 -8.859 21.649 1.00 38.98 O
ATOM 27 O5' G A1115 54.987 -6.853 23.148 1.00 38.55 O
TER
ATOM 1 O3' C B1090 64.380 -3.439 36.576 1.00 34.38 O
ATOM 2 P G B1091 63.349 -2.297 36.159 1.00 33.22 P
ATOM 3 OP1 G B1091 64.077 -1.007 36.078 1.00 33.32 O
ATOM 4 OP2 G B1091 62.176 -2.415 37.119 1.00 32.97 O
ATOM 5 O5' G B1091 62.971 -2.750 34.694 1.00 33.43 O
ATOM 6 C5' G B1091 63.992 -3.021 33.763 1.00 33.67 C
ATOM 7 C4' G B1091 63.440 -3.581 32.473 1.00 33.86 C
ATOM 8 O4' G B1091 63.297 -5.030 32.561 1.00 33.82 O
ATOM 9 C3' G B1091 62.053 -3.114 32.063 1.00 33.86 C
ATOM 10 O3' G B1091 62.040 -1.828 31.495 1.00 33.99 O
ATOM 11 C2' G B1091 61.642 -4.204 31.095 1.00 34.01 C
ATOM 12 O2' G B1091 62.377 -4.089 29.893 1.00 34.30 O
ATOM 13 C1' G B1091 62.150 -5.431 31.825 1.00 33.89 C
ATOM 14 N9 G B1091 61.137 -5.956 32.753 1.00 33.64 N
ATOM 15 C8 G B1091 61.091 -5.824 34.104 1.00 33.39 C
ATOM 16 N7 G B1091 60.042 -6.408 34.594 1.00 33.24 N
ATOM 17 C5 G B1091 59.345 -6.934 33.516 1.00 33.40 C
ATOM 18 C6 G B1091 58.146 -7.672 33.424 1.00 33.37 C
ATOM 19 O6 G B1091 57.345 -8.057 34.305 1.00 33.17 O
ATOM 20 N1 G B1091 57.855 -7.969 32.110 1.00 33.61 N
ATOM 21 C2 G B1091 58.589 -7.635 31.053 1.00 33.86 C
ATOM 22 N2 G B1091 58.114 -8.012 29.886 1.00 34.08 N
ATOM 23 N3 G B1091 59.702 -6.972 31.135 1.00 33.89 N
ATOM 24 C4 G B1091 60.018 -6.652 32.383 1.00 33.65 C
ATOM 25 P G B1092 60.690 -0.944 31.509 1.00 34.15 P
ATOM 26 OP1 G B1092 60.941 0.229 30.648 1.00 34.38 O
ATOM 27 OP2 G B1092 60.313 -0.722 32.917 1.00 33.86 O
ATOM 28 O5' G B1092 59.631 -1.876 30.816 1.00 34.21 O
TER
ATOM 2 P A A1114 59.319 -11.602 22.020 1.00 37.20 P
ATOM 3 OP1 A A1114 58.561 -12.722 21.488 1.00 37.36 O
ATOM 4 OP2 A A1114 59.931 -10.635 21.055 1.00 37.45 O
ATOM 5 O5' A A1114 58.456 -10.823 23.082 1.00 36.86 O
ATOM 6 C5' A A1114 57.305 -11.375 23.624 1.00 36.70 C
ATOM 7 C4' A A1114 56.885 -10.573 24.792 1.00 36.36 C
ATOM 8 O4' A A1114 58.030 -10.363 25.643 1.00 36.19 O
ATOM 9 C3' A A1114 56.399 -9.181 24.482 1.00 36.39 C
ATOM 10 O3' A A1114 55.009 -9.159 24.123 1.00 36.43 O
ATOM 11 C2' A A1114 56.694 -8.452 25.772 1.00 36.07 C
ATOM 12 O2' A A1114 55.742 -8.817 26.732 1.00 35.81 O
ATOM 13 C1' A A1114 58.016 -9.067 26.173 1.00 36.03 C
ATOM 14 N9 A A1114 59.127 -8.292 25.605 1.00 36.20 N
ATOM 15 C8 A A1114 59.734 -8.436 24.373 1.00 36.53 C
ATOM 16 N7 A A1114 60.660 -7.534 24.130 1.00 36.62 N
ATOM 17 C5 A A1114 60.638 -6.732 25.264 1.00 36.34 C
ATOM 18 C6 A A1114 61.346 -5.601 25.574 1.00 36.30 C
ATOM 19 N6 A A1114 62.233 -5.087 24.729 1.00 36.55 N
ATOM 20 N1 A A1114 61.120 -5.049 26.786 1.00 36.00 N
ATOM 21 C2 A A1114 60.230 -5.567 27.650 1.00 35.76 C
ATOM 22 N3 A A1114 59.486 -6.639 27.455 1.00 35.77 N
ATOM 23 C4 A A1114 59.722 -7.171 26.208 1.00 36.07 C
ATOM 24 P G A1115 54.500 -8.330 22.831 1.00 38.64 P
ATOM 25 OP1 G A1115 53.021 -8.356 22.856 1.00 38.61 O
ATOM 26 OP2 G A1115 55.203 -8.859 21.649 1.00 38.98 O
ATOM 27 O5' G A1115 54.987 -6.853 23.148 1.00 38.55 O
TER
ATOM 1 O3' C B1090 64.380 -3.439 36.576 1.00 34.38 O
ATOM 2 P G B1091 63.349 -2.297 36.159 1.00 33.22 P
ATOM 3 OP1 G B1091 64.077 -1.007 36.078 1.00 33.32 O
ATOM 4 OP2 G B1091 62.176 -2.415 37.119 1.00 32.97 O
ATOM 5 O5' G B1091 62.971 -2.750 34.694 1.00 33.43 O
ATOM 6 C5' G B1091 63.992 -3.021 33.763 1.00 33.67 C
ATOM 7 C4' G B1091 63.440 -3.581 32.473 1.00 33.86 C
ATOM 8 O4' G B1091 63.297 -5.030 32.561 1.00 33.82 O
ATOM 9 C3' G B1091 62.053 -3.114 32.063 1.00 33.86 C
ATOM 10 O3' G B1091 62.040 -1.828 31.495 1.00 33.99 O
ATOM 11 C2' G B1091 61.642 -4.204 31.095 1.00 34.01 C
ATOM 12 O2' G B1091 62.377 -4.089 29.893 1.00 34.30 O
ATOM 13 C1' G B1091 62.150 -5.431 31.825 1.00 33.89 C
ATOM 14 N9 G B1091 61.137 -5.956 32.753 1.00 33.64 N
ATOM 15 C8 G B1091 61.091 -5.824 34.104 1.00 33.39 C
ATOM 16 N7 G B1091 60.042 -6.408 34.594 1.00 33.24 N
ATOM 17 C5 G B1091 59.345 -6.934 33.516 1.00 33.40 C
ATOM 18 C6 G B1091 58.146 -7.672 33.424 1.00 33.37 C
ATOM 19 O6 G B1091 57.345 -8.057 34.305 1.00 33.17 O
ATOM 20 N1 G B1091 57.855 -7.969 32.110 1.00 33.61 N
ATOM 21 C2 G B1091 58.589 -7.635 31.053 1.00 33.86 C
ATOM 22 N2 G B1091 58.114 -8.012 29.886 1.00 34.08 N
ATOM 23 N3 G B1091 59.702 -6.972 31.135 1.00 33.89 N
ATOM 24 C4 G B1091 60.018 -6.652 32.383 1.00 33.65 C
ATOM 25 P G B1092 60.690 -0.944 31.509 1.00 34.15 P
ATOM 26 OP1 G B1092 60.941 0.229 30.648 1.00 34.38 O
ATOM 27 OP2 G B1092 60.313 -0.722 32.917 1.00 33.86 O
ATOM 28 O5' G B1092 59.631 -1.876 30.816 1.00 34.21 O
TER
Atoms:
OP1: (58.561,-12.722,21.488)
OP2: (59.931,-10.635,21.055)
C3': (56.399,-9.181,24.482)
C1': (58.016,-9.067,26.173)
C5': (57.305,-11.375,23.624)
O4': (58.030,-10.363,25.643)
C8: (59.734,-8.436,24.373)
O2': (55.742,-8.817,26.732)
C6: (61.346,-5.601,25.574)
C5: (60.638,-6.732,25.264)
C4: (59.722,-7.171,26.208)
P: (59.319,-11.602,22.020)
C4': (56.885,-10.573,24.792)
C2': (56.694,-8.452,25.772)
C2: (60.230,-5.567,27.650)
N1: (61.120,-5.049,26.786)
N3: (59.486,-6.639,27.455)
N6: (62.233,-5.087,24.729)
N7: (60.660,-7.534,24.130)
N9: (59.127,-8.292,25.605)
O5': (58.456,-10.823,23.082)
O3': (55.009,-9.159,24.123)
OP2: (59.931,-10.635,21.055)
C3': (56.399,-9.181,24.482)
C1': (58.016,-9.067,26.173)
C5': (57.305,-11.375,23.624)
O4': (58.030,-10.363,25.643)
C8: (59.734,-8.436,24.373)
O2': (55.742,-8.817,26.732)
C6: (61.346,-5.601,25.574)
C5: (60.638,-6.732,25.264)
C4: (59.722,-7.171,26.208)
P: (59.319,-11.602,22.020)
C4': (56.885,-10.573,24.792)
C2': (56.694,-8.452,25.772)
C2: (60.230,-5.567,27.650)
N1: (61.120,-5.049,26.786)
N3: (59.486,-6.639,27.455)
N6: (62.233,-5.087,24.729)
N7: (60.660,-7.534,24.130)
N9: (59.127,-8.292,25.605)
O5': (58.456,-10.823,23.082)
O3': (55.009,-9.159,24.123)
OP1: (64.077,-1.007,36.078)
OP2: (62.176,-2.415,37.119)
C3': (62.053,-3.114,32.063)
C1': (62.150,-5.431,31.825)
C5': (63.992,-3.021,33.763)
O6: (57.345,-8.057,34.305)
O4': (63.297,-5.030,32.561)
C8: (61.091,-5.824,34.104)
C2: (58.589,-7.635,31.053)
C6: (58.146,-7.672,33.424)
C5: (59.345,-6.934,33.516)
C4: (60.018,-6.652,32.383)
P: (63.349,-2.297,36.159)
C4': (63.440,-3.581,32.473)
C2': (61.642,-4.204,31.095)
O2': (62.377,-4.089,29.893)
N1: (57.855,-7.969,32.110)
N2: (58.114,-8.012,29.886)
N3: (59.702,-6.972,31.135)
N7: (60.042,-6.408,34.594)
N9: (61.137,-5.956,32.753)
O5': (62.971,-2.750,34.694)
O3': (62.040,-1.828,31.495)
OP2: (62.176,-2.415,37.119)
C3': (62.053,-3.114,32.063)
C1': (62.150,-5.431,31.825)
C5': (63.992,-3.021,33.763)
O6: (57.345,-8.057,34.305)
O4': (63.297,-5.030,32.561)
C8: (61.091,-5.824,34.104)
C2: (58.589,-7.635,31.053)
C6: (58.146,-7.672,33.424)
C5: (59.345,-6.934,33.516)
C4: (60.018,-6.652,32.383)
P: (63.349,-2.297,36.159)
C4': (63.440,-3.581,32.473)
C2': (61.642,-4.204,31.095)
O2': (62.377,-4.089,29.893)
N1: (57.855,-7.969,32.110)
N2: (58.114,-8.012,29.886)
N3: (59.702,-6.972,31.135)
N7: (60.042,-6.408,34.594)
N9: (61.137,-5.956,32.753)
O5': (62.971,-2.750,34.694)
O3': (62.040,-1.828,31.495)
Image (generated by PyMOL):