ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2VQE:A141:A63

Extra

PDB:
ATOM 1 O3' A A 140 115.994 30.691 3.232 1.00 36.29 O
ATOM 2 P A A 141 116.496 29.585 4.274 1.00 39.20 P
ATOM 3 OP1 A A 141 117.932 29.820 4.641 1.00 36.93 O
ATOM 4 OP2 A A 141 116.085 28.281 3.706 1.00 40.48 O
ATOM 5 O5' A A 141 115.625 29.895 5.566 1.00 39.28 O
ATOM 6 C5' A A 141 115.803 31.124 6.267 1.00 39.48 C
ATOM 7 C4' A A 141 114.698 31.331 7.269 1.00 40.16 C
ATOM 8 O4' A A 141 113.422 31.422 6.595 1.00 39.40 O
ATOM 9 C3' A A 141 114.470 30.231 8.283 1.00 40.33 C
ATOM 10 O3' A A 141 115.392 30.282 9.340 1.00 42.27 O
ATOM 11 C2' A A 141 113.054 30.512 8.762 1.00 40.12 C
ATOM 12 O2' A A 141 112.984 31.460 9.802 1.00 41.25 O
ATOM 13 C1' A A 141 112.400 31.086 7.508 1.00 39.35 C
ATOM 14 N9 A A 141 111.505 30.115 6.898 1.00 39.83 N
ATOM 15 C8 A A 141 111.723 29.245 5.856 1.00 40.17 C
ATOM 16 N7 A A 141 110.697 28.469 5.597 1.00 40.56 N
ATOM 17 C5 A A 141 109.741 28.861 6.524 1.00 40.07 C
ATOM 18 C6 A A 141 108.440 28.418 6.781 1.00 40.71 C
ATOM 19 N6 A A 141 107.858 27.420 6.117 1.00 42.05 N
ATOM 20 N1 A A 141 107.748 29.032 7.769 1.00 42.05 N
ATOM 21 C2 A A 141 108.348 30.013 8.459 1.00 41.52 C
ATOM 22 N3 A A 141 109.574 30.508 8.321 1.00 40.28 N
ATOM 23 C4 A A 141 110.223 29.882 7.322 1.00 40.33 C
ATOM 24 P C A 142 116.262 28.976 9.675 1.00 45.07 P
ATOM 25 OP1 C A 142 116.912 29.154 11.012 1.00 43.93 O
ATOM 26 OP2 C A 142 117.093 28.692 8.469 1.00 43.51 O
ATOM 27 O5' C A 142 115.160 27.842 9.826 1.00 46.47 O
TER

ATOM 1 O3' C B 62 100.888 36.423 9.344 1.00 41.23 O
ATOM 2 P G B 63 100.727 35.568 10.701 1.00 42.23 P
ATOM 3 OP1 G B 63 99.366 34.966 10.563 1.00 41.05 O
ATOM 4 OP2 G B 63 101.081 36.372 11.903 1.00 40.75 O
ATOM 5 O5' G B 63 101.802 34.423 10.537 1.00 40.98 O
ATOM 6 C5' G B 63 101.654 33.452 9.499 1.00 41.32 C
ATOM 7 C4' G B 63 102.911 32.646 9.359 1.00 41.95 C
ATOM 8 O4' G B 63 103.992 33.511 8.921 1.00 42.32 O
ATOM 9 C3' G B 63 103.448 32.001 10.625 1.00 42.43 C
ATOM 10 O3' G B 63 102.778 30.788 10.954 1.00 44.79 O
ATOM 11 C2' G B 63 104.914 31.785 10.269 1.00 41.64 C
ATOM 12 O2' G B 63 105.113 30.632 9.475 1.00 41.96 O
ATOM 13 C1' G B 63 105.221 33.034 9.441 1.00 39.90 C
ATOM 14 N9 G B 63 105.838 34.067 10.272 1.00 35.50 N
ATOM 15 C8 G B 63 105.224 35.067 10.987 1.00 33.54 C
ATOM 16 N7 G B 63 106.062 35.764 11.712 1.00 30.67 N
ATOM 17 C5 G B 63 107.301 35.204 11.438 1.00 30.68 C
ATOM 18 C6 G B 63 108.584 35.523 11.943 1.00 31.44 C
ATOM 19 O6 G B 63 108.894 36.390 12.764 1.00 32.88 O
ATOM 20 N1 G B 63 109.567 34.704 11.400 1.00 31.40 N
ATOM 21 C2 G B 63 109.340 33.695 10.492 1.00 33.60 C
ATOM 22 N2 G B 63 110.417 32.991 10.081 1.00 34.68 N
ATOM 23 N3 G B 63 108.147 33.389 10.018 1.00 33.34 N
ATOM 24 C4 G B 63 107.182 34.175 10.533 1.00 33.02 C
ATOM 25 P G B 64 103.144 30.021 12.327 1.00 45.29 P
ATOM 26 OP1 G B 64 102.192 28.880 12.412 1.00 44.46 O
ATOM 27 OP2 G B 64 103.228 31.013 13.426 1.00 44.64 O
ATOM 28 O5' G B 64 104.597 29.441 12.018 1.00 45.66 O
TER

Atoms:
OP1: (117.932,29.820,4.641)
OP2: (116.085,28.281,3.706)
C3': (114.470,30.231,8.283)
C1': (112.400,31.086,7.508)
C5': (115.803,31.124,6.267)
O4': (113.422,31.422,6.595)
C8: (111.723,29.245,5.856)
O2': (112.984,31.460,9.802)
C6: (108.440,28.418,6.781)
C5: (109.741,28.861,6.524)
C4: (110.223,29.882,7.322)
P: (116.496,29.585,4.274)
C4': (114.698,31.331,7.269)
C2': (113.054,30.512,8.762)
C2: (108.348,30.013,8.459)
N1: (107.748,29.032,7.769)
N3: (109.574,30.508,8.321)
N6: (107.858,27.420,6.117)
N7: (110.697,28.469,5.597)
N9: (111.505,30.115,6.898)
O5': (115.625,29.895,5.566)
O3': (115.392,30.282,9.340)
OP1: (99.366,34.966,10.563)
OP2: (101.081,36.372,11.903)
C3': (103.448,32.001,10.625)
C1': (105.221,33.034,9.441)
C5': (101.654,33.452,9.499)
O6: (108.894,36.390,12.764)
O4': (103.992,33.511,8.921)
C8: (105.224,35.067,10.987)
C2: (109.340,33.695,10.492)
C6: (108.584,35.523,11.943)
C5: (107.301,35.204,11.438)
C4: (107.182,34.175,10.533)
P: (100.727,35.568,10.701)
C4': (102.911,32.646,9.359)
C2': (104.914,31.785,10.269)
O2': (105.113,30.632,9.475)
N1: (109.567,34.704,11.400)
N2: (110.417,32.991,10.081)
N3: (108.147,33.389,10.018)
N7: (106.062,35.764,11.712)
N9: (105.838,34.067,10.272)
O5': (101.802,34.423,10.537)
O3': (102.778,30.788,10.954)
Image (generated by PyMOL):
PyMOL image
show in jmol