Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11351:11319
Extra
PDB:
ATOM 1 O3' A A1350 78.002 -3.106 58.649 1.00 32.03 O
ATOM 2 P A A1351 78.552 -2.300 59.917 1.00 32.07 P
ATOM 3 OP1 A A1351 77.753 -1.082 60.015 1.00 31.98 O
ATOM 4 OP2 A A1351 80.039 -2.163 59.774 1.00 32.31 O
ATOM 5 O5' A A1351 78.219 -3.271 61.118 1.00 31.99 O
ATOM 6 C5' A A1351 76.897 -3.675 61.373 1.00 31.78 C
ATOM 7 C4' A A1351 76.861 -4.764 62.385 1.00 31.76 C
ATOM 8 O4' A A1351 77.432 -5.967 61.816 1.00 31.84 O
ATOM 9 C3' A A1351 77.651 -4.515 63.646 1.00 31.90 C
ATOM 10 O3' A A1351 76.906 -3.787 64.573 1.00 31.81 O
ATOM 11 C2' A A1351 77.979 -5.921 64.126 1.00 31.95 C
ATOM 12 O2' A A1351 76.896 -6.437 64.844 1.00 31.79 O
ATOM 13 C1' A A1351 78.086 -6.709 62.817 1.00 31.95 C
ATOM 14 N9 A A1351 79.478 -6.932 62.380 1.00 32.17 N
ATOM 15 C8 A A1351 80.377 -5.936 62.066 1.00 32.32 C
ATOM 16 N7 A A1351 81.488 -6.417 61.646 1.00 32.50 N
ATOM 17 C5 A A1351 81.362 -7.796 61.671 1.00 32.49 C
ATOM 18 C6 A A1351 82.226 -8.836 61.330 1.00 32.65 C
ATOM 19 N6 A A1351 83.443 -8.677 60.856 1.00 32.87 N
ATOM 20 N1 A A1351 81.779 -10.081 61.467 1.00 32.60 N
ATOM 21 C2 A A1351 80.531 -10.301 61.885 1.00 32.39 C
ATOM 22 N3 A A1351 79.631 -9.390 62.225 1.00 32.22 N
ATOM 23 C4 A A1351 80.105 -8.136 62.089 1.00 32.28 C
ATOM 24 P G A1352 77.531 -2.582 65.455 1.00 32.08 P
ATOM 25 OP1 G A1352 76.571 -2.324 66.558 1.00 31.97 O
ATOM 26 OP2 G A1352 77.879 -1.475 64.531 1.00 32.15 O
ATOM 27 O5' G A1352 78.823 -3.219 66.051 1.00 32.29 O
TER
ATOM 1 O3' G B1318 83.614 -19.731 62.222 1.00 32.21 O
ATOM 2 P G B1319 84.177 -18.943 63.499 1.00 37.00 P
ATOM 3 OP1 G B1319 85.603 -19.383 63.664 1.00 37.32 O
ATOM 4 OP2 G B1319 83.223 -19.138 64.644 1.00 36.85 O
ATOM 5 O5' G B1319 84.109 -17.429 63.022 1.00 36.87 O
ATOM 6 C5' G B1319 83.870 -16.383 63.946 1.00 36.76 C
ATOM 7 C4' G B1319 83.375 -15.169 63.241 1.00 36.59 C
ATOM 8 O4' G B1319 82.048 -15.445 62.673 1.00 36.35 O
ATOM 9 C3' G B1319 83.186 -13.940 64.099 1.00 36.50 C
ATOM 10 O3' G B1319 84.379 -13.200 64.248 1.00 36.70 O
ATOM 11 C2' G B1319 82.083 -13.174 63.346 1.00 36.25 C
ATOM 12 O2' G B1319 82.613 -12.491 62.222 1.00 36.31 O
ATOM 13 C1' G B1319 81.204 -14.318 62.837 1.00 36.14 C
ATOM 14 N9 G B1319 80.137 -14.653 63.808 1.00 35.99 N
ATOM 15 C8 G B1319 79.953 -15.814 64.476 1.00 36.03 C
ATOM 16 N7 G B1319 78.939 -15.751 65.275 1.00 35.87 N
ATOM 17 C5 G B1319 78.450 -14.482 65.132 1.00 35.72 C
ATOM 18 C6 G B1319 77.364 -13.857 65.741 1.00 35.53 C
ATOM 19 O6 G B1319 76.577 -14.329 66.557 1.00 35.45 O
ATOM 20 N1 G B1319 77.179 -12.560 65.316 1.00 35.44 N
ATOM 21 C2 G B1319 77.948 -11.963 64.405 1.00 35.52 C
ATOM 22 N2 G B1319 77.621 -10.720 64.138 1.00 35.42 N
ATOM 23 N3 G B1319 78.956 -12.533 63.818 1.00 35.69 N
ATOM 24 C4 G B1319 79.157 -13.794 64.228 1.00 35.79 C
ATOM 25 P C B1320 84.765 -12.518 65.669 1.00 33.23 P
ATOM 26 OP1 C B1320 86.216 -12.213 65.600 1.00 33.50 O
ATOM 27 OP2 C B1320 84.269 -13.417 66.727 1.00 33.20 O
ATOM 28 O5' C B1320 83.909 -11.149 65.721 1.00 33.02 O
TER
ATOM 2 P A A1351 78.552 -2.300 59.917 1.00 32.07 P
ATOM 3 OP1 A A1351 77.753 -1.082 60.015 1.00 31.98 O
ATOM 4 OP2 A A1351 80.039 -2.163 59.774 1.00 32.31 O
ATOM 5 O5' A A1351 78.219 -3.271 61.118 1.00 31.99 O
ATOM 6 C5' A A1351 76.897 -3.675 61.373 1.00 31.78 C
ATOM 7 C4' A A1351 76.861 -4.764 62.385 1.00 31.76 C
ATOM 8 O4' A A1351 77.432 -5.967 61.816 1.00 31.84 O
ATOM 9 C3' A A1351 77.651 -4.515 63.646 1.00 31.90 C
ATOM 10 O3' A A1351 76.906 -3.787 64.573 1.00 31.81 O
ATOM 11 C2' A A1351 77.979 -5.921 64.126 1.00 31.95 C
ATOM 12 O2' A A1351 76.896 -6.437 64.844 1.00 31.79 O
ATOM 13 C1' A A1351 78.086 -6.709 62.817 1.00 31.95 C
ATOM 14 N9 A A1351 79.478 -6.932 62.380 1.00 32.17 N
ATOM 15 C8 A A1351 80.377 -5.936 62.066 1.00 32.32 C
ATOM 16 N7 A A1351 81.488 -6.417 61.646 1.00 32.50 N
ATOM 17 C5 A A1351 81.362 -7.796 61.671 1.00 32.49 C
ATOM 18 C6 A A1351 82.226 -8.836 61.330 1.00 32.65 C
ATOM 19 N6 A A1351 83.443 -8.677 60.856 1.00 32.87 N
ATOM 20 N1 A A1351 81.779 -10.081 61.467 1.00 32.60 N
ATOM 21 C2 A A1351 80.531 -10.301 61.885 1.00 32.39 C
ATOM 22 N3 A A1351 79.631 -9.390 62.225 1.00 32.22 N
ATOM 23 C4 A A1351 80.105 -8.136 62.089 1.00 32.28 C
ATOM 24 P G A1352 77.531 -2.582 65.455 1.00 32.08 P
ATOM 25 OP1 G A1352 76.571 -2.324 66.558 1.00 31.97 O
ATOM 26 OP2 G A1352 77.879 -1.475 64.531 1.00 32.15 O
ATOM 27 O5' G A1352 78.823 -3.219 66.051 1.00 32.29 O
TER
ATOM 1 O3' G B1318 83.614 -19.731 62.222 1.00 32.21 O
ATOM 2 P G B1319 84.177 -18.943 63.499 1.00 37.00 P
ATOM 3 OP1 G B1319 85.603 -19.383 63.664 1.00 37.32 O
ATOM 4 OP2 G B1319 83.223 -19.138 64.644 1.00 36.85 O
ATOM 5 O5' G B1319 84.109 -17.429 63.022 1.00 36.87 O
ATOM 6 C5' G B1319 83.870 -16.383 63.946 1.00 36.76 C
ATOM 7 C4' G B1319 83.375 -15.169 63.241 1.00 36.59 C
ATOM 8 O4' G B1319 82.048 -15.445 62.673 1.00 36.35 O
ATOM 9 C3' G B1319 83.186 -13.940 64.099 1.00 36.50 C
ATOM 10 O3' G B1319 84.379 -13.200 64.248 1.00 36.70 O
ATOM 11 C2' G B1319 82.083 -13.174 63.346 1.00 36.25 C
ATOM 12 O2' G B1319 82.613 -12.491 62.222 1.00 36.31 O
ATOM 13 C1' G B1319 81.204 -14.318 62.837 1.00 36.14 C
ATOM 14 N9 G B1319 80.137 -14.653 63.808 1.00 35.99 N
ATOM 15 C8 G B1319 79.953 -15.814 64.476 1.00 36.03 C
ATOM 16 N7 G B1319 78.939 -15.751 65.275 1.00 35.87 N
ATOM 17 C5 G B1319 78.450 -14.482 65.132 1.00 35.72 C
ATOM 18 C6 G B1319 77.364 -13.857 65.741 1.00 35.53 C
ATOM 19 O6 G B1319 76.577 -14.329 66.557 1.00 35.45 O
ATOM 20 N1 G B1319 77.179 -12.560 65.316 1.00 35.44 N
ATOM 21 C2 G B1319 77.948 -11.963 64.405 1.00 35.52 C
ATOM 22 N2 G B1319 77.621 -10.720 64.138 1.00 35.42 N
ATOM 23 N3 G B1319 78.956 -12.533 63.818 1.00 35.69 N
ATOM 24 C4 G B1319 79.157 -13.794 64.228 1.00 35.79 C
ATOM 25 P C B1320 84.765 -12.518 65.669 1.00 33.23 P
ATOM 26 OP1 C B1320 86.216 -12.213 65.600 1.00 33.50 O
ATOM 27 OP2 C B1320 84.269 -13.417 66.727 1.00 33.20 O
ATOM 28 O5' C B1320 83.909 -11.149 65.721 1.00 33.02 O
TER
Atoms:
OP1: (77.753,-1.082,60.015)
OP2: (80.039,-2.163,59.774)
C3': (77.651,-4.515,63.646)
C1': (78.086,-6.709,62.817)
C5': (76.897,-3.675,61.373)
O4': (77.432,-5.967,61.816)
C8: (80.377,-5.936,62.066)
O2': (76.896,-6.437,64.844)
C6: (82.226,-8.836,61.330)
C5: (81.362,-7.796,61.671)
C4: (80.105,-8.136,62.089)
P: (78.552,-2.300,59.917)
C4': (76.861,-4.764,62.385)
C2': (77.979,-5.921,64.126)
C2: (80.531,-10.301,61.885)
N1: (81.779,-10.081,61.467)
N3: (79.631,-9.390,62.225)
N6: (83.443,-8.677,60.856)
N7: (81.488,-6.417,61.646)
N9: (79.478,-6.932,62.380)
O5': (78.219,-3.271,61.118)
O3': (76.906,-3.787,64.573)
OP2: (80.039,-2.163,59.774)
C3': (77.651,-4.515,63.646)
C1': (78.086,-6.709,62.817)
C5': (76.897,-3.675,61.373)
O4': (77.432,-5.967,61.816)
C8: (80.377,-5.936,62.066)
O2': (76.896,-6.437,64.844)
C6: (82.226,-8.836,61.330)
C5: (81.362,-7.796,61.671)
C4: (80.105,-8.136,62.089)
P: (78.552,-2.300,59.917)
C4': (76.861,-4.764,62.385)
C2': (77.979,-5.921,64.126)
C2: (80.531,-10.301,61.885)
N1: (81.779,-10.081,61.467)
N3: (79.631,-9.390,62.225)
N6: (83.443,-8.677,60.856)
N7: (81.488,-6.417,61.646)
N9: (79.478,-6.932,62.380)
O5': (78.219,-3.271,61.118)
O3': (76.906,-3.787,64.573)
OP1: (85.603,-19.383,63.664)
OP2: (83.223,-19.138,64.644)
C3': (83.186,-13.940,64.099)
C1': (81.204,-14.318,62.837)
C5': (83.870,-16.383,63.946)
O6: (76.577,-14.329,66.557)
O4': (82.048,-15.445,62.673)
C8: (79.953,-15.814,64.476)
C2: (77.948,-11.963,64.405)
C6: (77.364,-13.857,65.741)
C5: (78.450,-14.482,65.132)
C4: (79.157,-13.794,64.228)
P: (84.177,-18.943,63.499)
C4': (83.375,-15.169,63.241)
C2': (82.083,-13.174,63.346)
O2': (82.613,-12.491,62.222)
N1: (77.179,-12.560,65.316)
N2: (77.621,-10.720,64.138)
N3: (78.956,-12.533,63.818)
N7: (78.939,-15.751,65.275)
N9: (80.137,-14.653,63.808)
O5': (84.109,-17.429,63.022)
O3': (84.379,-13.200,64.248)
OP2: (83.223,-19.138,64.644)
C3': (83.186,-13.940,64.099)
C1': (81.204,-14.318,62.837)
C5': (83.870,-16.383,63.946)
O6: (76.577,-14.329,66.557)
O4': (82.048,-15.445,62.673)
C8: (79.953,-15.814,64.476)
C2: (77.948,-11.963,64.405)
C6: (77.364,-13.857,65.741)
C5: (78.450,-14.482,65.132)
C4: (79.157,-13.794,64.228)
P: (84.177,-18.943,63.499)
C4': (83.375,-15.169,63.241)
C2': (82.083,-13.174,63.346)
O2': (82.613,-12.491,62.222)
N1: (77.179,-12.560,65.316)
N2: (77.621,-10.720,64.138)
N3: (78.956,-12.533,63.818)
N7: (78.939,-15.751,65.275)
N9: (80.137,-14.653,63.808)
O5': (84.109,-17.429,63.022)
O3': (84.379,-13.200,64.248)
Image (generated by PyMOL):