ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2VQE:A197:A131

Extra

PDB:
ATOM 1 O3' A A 196 95.537 47.206 -9.646 1.00 44.91 O
ATOM 2 P A A 197 95.452 45.803 -8.862 1.00 43.95 P
ATOM 3 OP1 A A 197 96.782 45.153 -9.021 1.00 44.22 O
ATOM 4 OP2 A A 197 94.232 45.074 -9.283 1.00 44.86 O
ATOM 5 O5' A A 197 95.332 46.227 -7.338 1.00 43.30 O
ATOM 6 C5' A A 197 96.494 46.660 -6.601 1.00 41.59 C
ATOM 7 C4' A A 197 96.067 47.401 -5.361 1.00 41.56 C
ATOM 8 O4' A A 197 95.133 48.425 -5.766 1.00 41.16 O
ATOM 9 C3' A A 197 95.328 46.555 -4.334 1.00 41.90 C
ATOM 10 O3' A A 197 96.259 46.043 -3.380 1.00 42.36 O
ATOM 11 C2' A A 197 94.380 47.558 -3.679 1.00 41.93 C
ATOM 12 O2' A A 197 94.983 48.298 -2.635 1.00 42.66 O
ATOM 13 C1' A A 197 94.077 48.510 -4.836 1.00 41.47 C
ATOM 14 N9 A A 197 92.848 48.217 -5.561 1.00 41.94 N
ATOM 15 C8 A A 197 92.538 47.078 -6.272 1.00 43.23 C
ATOM 16 N7 A A 197 91.367 47.126 -6.859 1.00 43.88 N
ATOM 17 C5 A A 197 90.869 48.375 -6.505 1.00 41.72 C
ATOM 18 C6 A A 197 89.678 49.033 -6.816 1.00 40.36 C
ATOM 19 N6 A A 197 88.715 48.500 -7.566 1.00 40.30 N
ATOM 20 N1 A A 197 89.499 50.273 -6.321 1.00 40.34 N
ATOM 21 C2 A A 197 90.452 50.801 -5.552 1.00 40.01 C
ATOM 22 N3 A A 197 91.612 50.279 -5.177 1.00 40.82 N
ATOM 23 C4 A A 197 91.766 49.051 -5.698 1.00 41.38 C
ATOM 24 P A A 198 96.432 44.457 -3.179 1.00 42.98 P
ATOM 25 OP1 A A 198 95.104 43.819 -3.432 1.00 44.94 O
ATOM 26 OP2 A A 198 97.623 44.015 -3.954 1.00 42.47 O
ATOM 27 O5' A A 198 96.762 44.323 -1.615 1.00 44.38 O
TER

ATOM 1 O3' A B 130 83.392 57.357 -5.870 1.00 53.24 O
ATOM 2 P G B 131 83.010 56.410 -4.614 1.00 54.81 P
ATOM 3 OP1 G B 131 81.682 55.803 -4.976 1.00 53.70 O
ATOM 4 OP2 G B 131 83.179 57.162 -3.332 1.00 52.83 O
ATOM 5 O5' G B 131 84.110 55.253 -4.654 1.00 53.21 O
ATOM 6 C5' G B 131 84.256 54.449 -5.833 1.00 52.17 C
ATOM 7 C4' G B 131 85.501 53.595 -5.767 1.00 50.96 C
ATOM 8 O4' G B 131 86.686 54.417 -5.580 1.00 49.49 O
ATOM 9 C3' G B 131 85.633 52.567 -4.660 1.00 51.45 C
ATOM 10 O3' G B 131 84.864 51.398 -4.877 1.00 54.76 O
ATOM 11 C2' G B 131 87.123 52.260 -4.720 1.00 49.33 C
ATOM 12 O2' G B 131 87.435 51.458 -5.840 1.00 48.75 O
ATOM 13 C1' G B 131 87.709 53.639 -4.979 1.00 46.69 C
ATOM 14 N9 G B 131 88.144 54.261 -3.733 1.00 42.27 N
ATOM 15 C8 G B 131 87.526 55.262 -3.025 1.00 41.57 C
ATOM 16 N7 G B 131 88.174 55.597 -1.941 1.00 39.64 N
ATOM 17 C5 G B 131 89.284 54.768 -1.935 1.00 39.34 C
ATOM 18 C6 G B 131 90.355 54.671 -1.006 1.00 40.62 C
ATOM 19 O6 G B 131 90.543 55.330 0.026 1.00 42.62 O
ATOM 20 N1 G B 131 91.268 53.688 -1.377 1.00 39.87 N
ATOM 21 C2 G B 131 91.163 52.900 -2.495 1.00 40.06 C
ATOM 22 N2 G B 131 92.135 51.990 -2.671 1.00 38.84 N
ATOM 23 N3 G B 131 90.176 52.992 -3.375 1.00 39.61 N
ATOM 24 C4 G B 131 89.279 53.937 -3.031 1.00 39.76 C
ATOM 25 P A B 132 84.335 50.557 -3.607 1.00 56.33 P
ATOM 26 OP1 A B 132 83.254 49.674 -4.136 1.00 56.91 O
ATOM 27 OP2 A B 132 84.060 51.515 -2.495 1.00 55.96 O
ATOM 28 O5' A B 132 85.566 49.641 -3.192 1.00 56.07 O
TER

Atoms:
OP1: (96.782,45.153,-9.021)
OP2: (94.232,45.074,-9.283)
C3': (95.328,46.555,-4.334)
C1': (94.077,48.510,-4.836)
C5': (96.494,46.660,-6.601)
O4': (95.133,48.425,-5.766)
C8: (92.538,47.078,-6.272)
O2': (94.983,48.298,-2.635)
C6: (89.678,49.033,-6.816)
C5: (90.869,48.375,-6.505)
C4: (91.766,49.051,-5.698)
P: (95.452,45.803,-8.862)
C4': (96.067,47.401,-5.361)
C2': (94.380,47.558,-3.679)
C2: (90.452,50.801,-5.552)
N1: (89.499,50.273,-6.321)
N3: (91.612,50.279,-5.177)
N6: (88.715,48.500,-7.566)
N7: (91.367,47.126,-6.859)
N9: (92.848,48.217,-5.561)
O5': (95.332,46.227,-7.338)
O3': (96.259,46.043,-3.380)
OP1: (81.682,55.803,-4.976)
OP2: (83.179,57.162,-3.332)
C3': (85.633,52.567,-4.660)
C1': (87.709,53.639,-4.979)
C5': (84.256,54.449,-5.833)
O6: (90.543,55.330,0.026)
O4': (86.686,54.417,-5.580)
C8: (87.526,55.262,-3.025)
C2: (91.163,52.900,-2.495)
C6: (90.355,54.671,-1.006)
C5: (89.284,54.768,-1.935)
C4: (89.279,53.937,-3.031)
P: (83.010,56.410,-4.614)
C4': (85.501,53.595,-5.767)
C2': (87.123,52.260,-4.720)
O2': (87.435,51.458,-5.840)
N1: (91.268,53.688,-1.377)
N2: (92.135,51.990,-2.671)
N3: (90.176,52.992,-3.375)
N7: (88.174,55.597,-1.941)
N9: (88.144,54.261,-3.733)
O5': (84.110,55.253,-4.654)
O3': (84.864,51.398,-4.877)
Image (generated by PyMOL):
PyMOL image
show in jmol