Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:910:967
Extra
PDB:
ATOM 1 O3' C A 9 56.635 41.225 102.829 1.00 40.87 O
ATOM 2 P A A 10 56.764 42.184 104.112 1.00 42.22 P
ATOM 3 OP1 A A 10 55.461 42.854 104.351 1.00 42.01 O
ATOM 4 OP2 A A 10 57.985 43.001 103.936 1.00 42.19 O
ATOM 5 O5' A A 10 57.031 41.178 105.318 1.00 44.03 O
ATOM 6 C5' A A 10 56.337 39.909 105.409 1.00 44.43 C
ATOM 7 C4' A A 10 56.210 39.482 106.856 1.00 45.13 C
ATOM 8 O4' A A 10 57.528 39.316 107.444 1.00 44.53 O
ATOM 9 C3' A A 10 55.514 40.493 107.749 1.00 44.81 C
ATOM 10 O3' A A 10 54.106 40.332 107.684 1.00 44.62 O
ATOM 11 C2' A A 10 56.090 40.180 109.122 1.00 44.85 C
ATOM 12 O2' A A 10 55.492 39.059 109.724 1.00 46.70 O
ATOM 13 C1' A A 10 57.534 39.828 108.766 1.00 45.12 C
ATOM 14 N9 A A 10 58.414 40.997 108.796 1.00 45.97 N
ATOM 15 C8 A A 10 58.906 41.706 107.729 1.00 44.53 C
ATOM 16 N7 A A 10 59.651 42.724 108.071 1.00 44.87 N
ATOM 17 C5 A A 10 59.654 42.685 109.456 1.00 46.26 C
ATOM 18 C6 A A 10 60.257 43.506 110.422 1.00 47.58 C
ATOM 19 N6 A A 10 61.002 44.573 110.122 1.00 47.77 N
ATOM 20 N1 A A 10 60.067 43.192 111.723 1.00 47.98 N
ATOM 21 C2 A A 10 59.320 42.124 112.019 1.00 47.56 C
ATOM 22 N3 A A 10 58.698 41.279 111.202 1.00 47.88 N
ATOM 23 C4 A A 10 58.906 41.621 109.917 1.00 46.89 C
ATOM 24 P C A 11 53.149 41.497 108.223 1.00 47.17 P
ATOM 25 OP1 C A 11 52.276 41.957 107.113 1.00 47.50 O
ATOM 26 OP2 C A 11 53.993 42.480 108.949 1.00 47.00 O
ATOM 27 O5' C A 11 52.208 40.755 109.269 1.00 49.14 O
TER
ATOM 1 O3' C B 66 61.237 43.640 121.512 1.00 54.48 O
ATOM 2 P G B 67 60.024 44.506 120.921 1.00 54.73 P
ATOM 3 OP1 G B 67 60.371 45.924 121.174 1.00 54.79 O
ATOM 4 OP2 G B 67 58.741 43.968 121.431 1.00 55.22 O
ATOM 5 O5' G B 67 60.086 44.210 119.359 1.00 54.03 O
ATOM 6 C5' G B 67 61.195 44.673 118.571 1.00 54.07 C
ATOM 7 C4' G B 67 61.024 44.267 117.130 1.00 53.85 C
ATOM 8 O4' G B 67 61.179 42.827 117.004 1.00 54.38 O
ATOM 9 C3' G B 67 59.655 44.534 116.533 1.00 53.41 C
ATOM 10 O3' G B 67 59.452 45.884 116.157 1.00 53.01 O
ATOM 11 C2' G B 67 59.634 43.560 115.366 1.00 54.62 C
ATOM 12 O2' G B 67 60.398 43.987 114.256 1.00 53.73 O
ATOM 13 C1' G B 67 60.287 42.336 116.010 1.00 55.08 C
ATOM 14 N9 G B 67 59.269 41.518 116.668 1.00 55.14 N
ATOM 15 C8 G B 67 59.038 41.398 118.018 1.00 55.24 C
ATOM 16 N7 G B 67 58.012 40.642 118.297 1.00 55.03 N
ATOM 17 C5 G B 67 57.545 40.228 117.059 1.00 54.11 C
ATOM 18 C6 G B 67 56.448 39.407 116.728 1.00 53.97 C
ATOM 19 O6 G B 67 55.631 38.875 117.484 1.00 55.81 O
ATOM 20 N1 G B 67 56.336 39.233 115.355 1.00 53.95 N
ATOM 21 C2 G B 67 57.169 39.787 114.419 1.00 53.90 C
ATOM 22 N2 G B 67 56.900 39.492 113.137 1.00 53.94 N
ATOM 23 N3 G B 67 58.190 40.570 114.714 1.00 53.16 N
ATOM 24 C4 G B 67 58.319 40.745 116.044 1.00 54.04 C
ATOM 25 P U B 68 57.971 46.506 116.229 1.00 53.72 P
ATOM 26 OP1 U B 68 58.047 47.933 115.861 1.00 55.35 O
ATOM 27 OP2 U B 68 57.352 46.117 117.523 1.00 53.82 O
ATOM 28 O5' U B 68 57.193 45.768 115.053 1.00 52.87 O
TER
ATOM 2 P A A 10 56.764 42.184 104.112 1.00 42.22 P
ATOM 3 OP1 A A 10 55.461 42.854 104.351 1.00 42.01 O
ATOM 4 OP2 A A 10 57.985 43.001 103.936 1.00 42.19 O
ATOM 5 O5' A A 10 57.031 41.178 105.318 1.00 44.03 O
ATOM 6 C5' A A 10 56.337 39.909 105.409 1.00 44.43 C
ATOM 7 C4' A A 10 56.210 39.482 106.856 1.00 45.13 C
ATOM 8 O4' A A 10 57.528 39.316 107.444 1.00 44.53 O
ATOM 9 C3' A A 10 55.514 40.493 107.749 1.00 44.81 C
ATOM 10 O3' A A 10 54.106 40.332 107.684 1.00 44.62 O
ATOM 11 C2' A A 10 56.090 40.180 109.122 1.00 44.85 C
ATOM 12 O2' A A 10 55.492 39.059 109.724 1.00 46.70 O
ATOM 13 C1' A A 10 57.534 39.828 108.766 1.00 45.12 C
ATOM 14 N9 A A 10 58.414 40.997 108.796 1.00 45.97 N
ATOM 15 C8 A A 10 58.906 41.706 107.729 1.00 44.53 C
ATOM 16 N7 A A 10 59.651 42.724 108.071 1.00 44.87 N
ATOM 17 C5 A A 10 59.654 42.685 109.456 1.00 46.26 C
ATOM 18 C6 A A 10 60.257 43.506 110.422 1.00 47.58 C
ATOM 19 N6 A A 10 61.002 44.573 110.122 1.00 47.77 N
ATOM 20 N1 A A 10 60.067 43.192 111.723 1.00 47.98 N
ATOM 21 C2 A A 10 59.320 42.124 112.019 1.00 47.56 C
ATOM 22 N3 A A 10 58.698 41.279 111.202 1.00 47.88 N
ATOM 23 C4 A A 10 58.906 41.621 109.917 1.00 46.89 C
ATOM 24 P C A 11 53.149 41.497 108.223 1.00 47.17 P
ATOM 25 OP1 C A 11 52.276 41.957 107.113 1.00 47.50 O
ATOM 26 OP2 C A 11 53.993 42.480 108.949 1.00 47.00 O
ATOM 27 O5' C A 11 52.208 40.755 109.269 1.00 49.14 O
TER
ATOM 1 O3' C B 66 61.237 43.640 121.512 1.00 54.48 O
ATOM 2 P G B 67 60.024 44.506 120.921 1.00 54.73 P
ATOM 3 OP1 G B 67 60.371 45.924 121.174 1.00 54.79 O
ATOM 4 OP2 G B 67 58.741 43.968 121.431 1.00 55.22 O
ATOM 5 O5' G B 67 60.086 44.210 119.359 1.00 54.03 O
ATOM 6 C5' G B 67 61.195 44.673 118.571 1.00 54.07 C
ATOM 7 C4' G B 67 61.024 44.267 117.130 1.00 53.85 C
ATOM 8 O4' G B 67 61.179 42.827 117.004 1.00 54.38 O
ATOM 9 C3' G B 67 59.655 44.534 116.533 1.00 53.41 C
ATOM 10 O3' G B 67 59.452 45.884 116.157 1.00 53.01 O
ATOM 11 C2' G B 67 59.634 43.560 115.366 1.00 54.62 C
ATOM 12 O2' G B 67 60.398 43.987 114.256 1.00 53.73 O
ATOM 13 C1' G B 67 60.287 42.336 116.010 1.00 55.08 C
ATOM 14 N9 G B 67 59.269 41.518 116.668 1.00 55.14 N
ATOM 15 C8 G B 67 59.038 41.398 118.018 1.00 55.24 C
ATOM 16 N7 G B 67 58.012 40.642 118.297 1.00 55.03 N
ATOM 17 C5 G B 67 57.545 40.228 117.059 1.00 54.11 C
ATOM 18 C6 G B 67 56.448 39.407 116.728 1.00 53.97 C
ATOM 19 O6 G B 67 55.631 38.875 117.484 1.00 55.81 O
ATOM 20 N1 G B 67 56.336 39.233 115.355 1.00 53.95 N
ATOM 21 C2 G B 67 57.169 39.787 114.419 1.00 53.90 C
ATOM 22 N2 G B 67 56.900 39.492 113.137 1.00 53.94 N
ATOM 23 N3 G B 67 58.190 40.570 114.714 1.00 53.16 N
ATOM 24 C4 G B 67 58.319 40.745 116.044 1.00 54.04 C
ATOM 25 P U B 68 57.971 46.506 116.229 1.00 53.72 P
ATOM 26 OP1 U B 68 58.047 47.933 115.861 1.00 55.35 O
ATOM 27 OP2 U B 68 57.352 46.117 117.523 1.00 53.82 O
ATOM 28 O5' U B 68 57.193 45.768 115.053 1.00 52.87 O
TER
Atoms:
OP1: (55.461,42.854,104.351)
OP2: (57.985,43.001,103.936)
C3': (55.514,40.493,107.749)
C1': (57.534,39.828,108.766)
C5': (56.337,39.909,105.409)
O4': (57.528,39.316,107.444)
C8: (58.906,41.706,107.729)
O2': (55.492,39.059,109.724)
C6: (60.257,43.506,110.422)
C5: (59.654,42.685,109.456)
C4: (58.906,41.621,109.917)
P: (56.764,42.184,104.112)
C4': (56.210,39.482,106.856)
C2': (56.090,40.180,109.122)
C2: (59.320,42.124,112.019)
N1: (60.067,43.192,111.723)
N3: (58.698,41.279,111.202)
N6: (61.002,44.573,110.122)
N7: (59.651,42.724,108.071)
N9: (58.414,40.997,108.796)
O5': (57.031,41.178,105.318)
O3': (54.106,40.332,107.684)
OP2: (57.985,43.001,103.936)
C3': (55.514,40.493,107.749)
C1': (57.534,39.828,108.766)
C5': (56.337,39.909,105.409)
O4': (57.528,39.316,107.444)
C8: (58.906,41.706,107.729)
O2': (55.492,39.059,109.724)
C6: (60.257,43.506,110.422)
C5: (59.654,42.685,109.456)
C4: (58.906,41.621,109.917)
P: (56.764,42.184,104.112)
C4': (56.210,39.482,106.856)
C2': (56.090,40.180,109.122)
C2: (59.320,42.124,112.019)
N1: (60.067,43.192,111.723)
N3: (58.698,41.279,111.202)
N6: (61.002,44.573,110.122)
N7: (59.651,42.724,108.071)
N9: (58.414,40.997,108.796)
O5': (57.031,41.178,105.318)
O3': (54.106,40.332,107.684)
OP1: (60.371,45.924,121.174)
OP2: (58.741,43.968,121.431)
C3': (59.655,44.534,116.533)
C1': (60.287,42.336,116.010)
C5': (61.195,44.673,118.571)
O6: (55.631,38.875,117.484)
O4': (61.179,42.827,117.004)
C8: (59.038,41.398,118.018)
C2: (57.169,39.787,114.419)
C6: (56.448,39.407,116.728)
C5: (57.545,40.228,117.059)
C4: (58.319,40.745,116.044)
P: (60.024,44.506,120.921)
C4': (61.024,44.267,117.130)
C2': (59.634,43.560,115.366)
O2': (60.398,43.987,114.256)
N1: (56.336,39.233,115.355)
N2: (56.900,39.492,113.137)
N3: (58.190,40.570,114.714)
N7: (58.012,40.642,118.297)
N9: (59.269,41.518,116.668)
O5': (60.086,44.210,119.359)
O3': (59.452,45.884,116.157)
OP2: (58.741,43.968,121.431)
C3': (59.655,44.534,116.533)
C1': (60.287,42.336,116.010)
C5': (61.195,44.673,118.571)
O6: (55.631,38.875,117.484)
O4': (61.179,42.827,117.004)
C8: (59.038,41.398,118.018)
C2: (57.169,39.787,114.419)
C6: (56.448,39.407,116.728)
C5: (57.545,40.228,117.059)
C4: (58.319,40.745,116.044)
P: (60.024,44.506,120.921)
C4': (61.024,44.267,117.130)
C2': (59.634,43.560,115.366)
O2': (60.398,43.987,114.256)
N1: (56.336,39.233,115.355)
N2: (56.900,39.492,113.137)
N3: (58.190,40.570,114.714)
N7: (58.012,40.642,118.297)
N9: (59.269,41.518,116.668)
O5': (60.086,44.210,119.359)
O3': (59.452,45.884,116.157)
Image (generated by PyMOL):