Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OHJ:A1342:A1287
Extra
PDB:
ATOM 1 O3' A A1341 12.146 -64.735 -15.283 1.00 38.76 O
ATOM 2 P A A1342 11.794 -63.204 -15.590 1.00 46.30 P
ATOM 3 OP1 A A1342 12.228 -62.427 -14.407 1.00 47.02 O
ATOM 4 OP2 A A1342 10.371 -63.135 -16.005 1.00 57.01 O
ATOM 5 O5' A A1342 12.720 -62.875 -16.822 1.00 41.57 O
ATOM 6 C5' A A1342 14.113 -62.726 -16.650 1.00 40.03 C
ATOM 7 C4' A A1342 14.852 -63.017 -17.920 1.00 35.23 C
ATOM 8 O4' A A1342 14.500 -64.335 -18.406 1.00 37.94 O
ATOM 9 C3' A A1342 14.552 -62.101 -19.093 1.00 31.41 C
ATOM 10 O3' A A1342 15.253 -60.872 -19.014 1.00 37.08 O
ATOM 11 C2' A A1342 14.963 -62.956 -20.292 1.00 37.28 C
ATOM 12 O2' A A1342 16.362 -62.861 -20.542 1.00 44.88 O
ATOM 13 C1' A A1342 14.645 -64.377 -19.803 1.00 35.51 C
ATOM 14 N9 A A1342 13.407 -64.883 -20.403 1.00 38.97 N
ATOM 15 C8 A A1342 12.122 -64.471 -20.223 1.00 40.87 C
ATOM 16 N7 A A1342 11.277 -65.110 -20.984 1.00 39.33 N
ATOM 17 C5 A A1342 12.062 -65.975 -21.709 1.00 39.06 C
ATOM 18 C6 A A1342 11.785 -66.921 -22.680 1.00 38.18 C
ATOM 19 N6 A A1342 10.566 -67.173 -23.116 1.00 42.91 N
ATOM 20 N1 A A1342 12.798 -67.615 -23.210 1.00 41.16 N
ATOM 21 C2 A A1342 14.027 -67.377 -22.789 1.00 40.73 C
ATOM 22 N3 A A1342 14.416 -66.500 -21.875 1.00 46.41 N
ATOM 23 C4 A A1342 13.372 -65.832 -21.372 1.00 42.21 C
ATOM 24 P U A1343 14.485 -59.486 -18.735 1.00 44.56 P
ATOM 25 OP1 U A1343 15.471 -58.584 -18.108 1.00 51.10 O
ATOM 26 OP2 U A1343 13.229 -59.799 -17.990 1.00 39.33 O
ATOM 27 O5' U A1343 14.162 -58.971 -20.204 1.00 33.54 O
TER
ATOM 1 O3' G B1286 15.310 -73.952 -29.962 1.00 41.96 O
ATOM 2 P G B1287 15.279 -72.443 -30.524 1.00 48.89 P
ATOM 3 OP1 G B1287 14.172 -72.378 -31.519 1.00 55.44 O
ATOM 4 OP2 G B1287 16.646 -72.086 -30.956 1.00 50.65 O
ATOM 5 O5' G B1287 14.894 -71.616 -29.232 1.00 36.53 O
ATOM 6 C5' G B1287 13.545 -71.512 -28.847 1.00 35.41 C
ATOM 7 C4' G B1287 13.391 -70.768 -27.561 1.00 34.14 C
ATOM 8 O4' G B1287 14.379 -71.219 -26.613 1.00 34.14 O
ATOM 9 C3' G B1287 13.592 -69.267 -27.628 1.00 32.50 C
ATOM 10 O3' G B1287 12.445 -68.588 -28.089 1.00 32.52 O
ATOM 11 C2' G B1287 13.926 -68.933 -26.193 1.00 41.51 C
ATOM 12 O2' G B1287 12.741 -68.913 -25.421 1.00 35.13 O
ATOM 13 C1' G B1287 14.754 -70.149 -25.778 1.00 40.33 C
ATOM 14 N9 G B1287 16.206 -69.919 -25.937 1.00 39.16 N
ATOM 15 C8 G B1287 17.007 -70.569 -26.842 1.00 38.00 C
ATOM 16 N7 G B1287 18.254 -70.227 -26.791 1.00 33.57 N
ATOM 17 C5 G B1287 18.274 -69.287 -25.787 1.00 40.08 C
ATOM 18 C6 G B1287 19.367 -68.563 -25.296 1.00 40.48 C
ATOM 19 O6 G B1287 20.510 -68.652 -25.699 1.00 44.26 O
ATOM 20 N1 G B1287 19.018 -67.693 -24.271 1.00 39.59 N
ATOM 21 C2 G B1287 17.729 -67.559 -23.786 1.00 42.44 C
ATOM 22 N2 G B1287 17.554 -66.670 -22.789 1.00 38.70 N
ATOM 23 N3 G B1287 16.682 -68.238 -24.249 1.00 39.12 N
ATOM 24 C4 G B1287 17.030 -69.080 -25.239 1.00 38.04 C
ATOM 25 P G B1288 12.574 -67.157 -28.807 1.00 36.57 P
ATOM 26 OP1 G B1288 11.194 -66.669 -29.087 1.00 41.99 O
ATOM 27 OP2 G B1288 13.514 -67.337 -29.943 1.00 35.55 O
ATOM 28 O5' G B1288 13.220 -66.259 -27.699 1.00 31.71 O
TER
ATOM 2 P A A1342 11.794 -63.204 -15.590 1.00 46.30 P
ATOM 3 OP1 A A1342 12.228 -62.427 -14.407 1.00 47.02 O
ATOM 4 OP2 A A1342 10.371 -63.135 -16.005 1.00 57.01 O
ATOM 5 O5' A A1342 12.720 -62.875 -16.822 1.00 41.57 O
ATOM 6 C5' A A1342 14.113 -62.726 -16.650 1.00 40.03 C
ATOM 7 C4' A A1342 14.852 -63.017 -17.920 1.00 35.23 C
ATOM 8 O4' A A1342 14.500 -64.335 -18.406 1.00 37.94 O
ATOM 9 C3' A A1342 14.552 -62.101 -19.093 1.00 31.41 C
ATOM 10 O3' A A1342 15.253 -60.872 -19.014 1.00 37.08 O
ATOM 11 C2' A A1342 14.963 -62.956 -20.292 1.00 37.28 C
ATOM 12 O2' A A1342 16.362 -62.861 -20.542 1.00 44.88 O
ATOM 13 C1' A A1342 14.645 -64.377 -19.803 1.00 35.51 C
ATOM 14 N9 A A1342 13.407 -64.883 -20.403 1.00 38.97 N
ATOM 15 C8 A A1342 12.122 -64.471 -20.223 1.00 40.87 C
ATOM 16 N7 A A1342 11.277 -65.110 -20.984 1.00 39.33 N
ATOM 17 C5 A A1342 12.062 -65.975 -21.709 1.00 39.06 C
ATOM 18 C6 A A1342 11.785 -66.921 -22.680 1.00 38.18 C
ATOM 19 N6 A A1342 10.566 -67.173 -23.116 1.00 42.91 N
ATOM 20 N1 A A1342 12.798 -67.615 -23.210 1.00 41.16 N
ATOM 21 C2 A A1342 14.027 -67.377 -22.789 1.00 40.73 C
ATOM 22 N3 A A1342 14.416 -66.500 -21.875 1.00 46.41 N
ATOM 23 C4 A A1342 13.372 -65.832 -21.372 1.00 42.21 C
ATOM 24 P U A1343 14.485 -59.486 -18.735 1.00 44.56 P
ATOM 25 OP1 U A1343 15.471 -58.584 -18.108 1.00 51.10 O
ATOM 26 OP2 U A1343 13.229 -59.799 -17.990 1.00 39.33 O
ATOM 27 O5' U A1343 14.162 -58.971 -20.204 1.00 33.54 O
TER
ATOM 1 O3' G B1286 15.310 -73.952 -29.962 1.00 41.96 O
ATOM 2 P G B1287 15.279 -72.443 -30.524 1.00 48.89 P
ATOM 3 OP1 G B1287 14.172 -72.378 -31.519 1.00 55.44 O
ATOM 4 OP2 G B1287 16.646 -72.086 -30.956 1.00 50.65 O
ATOM 5 O5' G B1287 14.894 -71.616 -29.232 1.00 36.53 O
ATOM 6 C5' G B1287 13.545 -71.512 -28.847 1.00 35.41 C
ATOM 7 C4' G B1287 13.391 -70.768 -27.561 1.00 34.14 C
ATOM 8 O4' G B1287 14.379 -71.219 -26.613 1.00 34.14 O
ATOM 9 C3' G B1287 13.592 -69.267 -27.628 1.00 32.50 C
ATOM 10 O3' G B1287 12.445 -68.588 -28.089 1.00 32.52 O
ATOM 11 C2' G B1287 13.926 -68.933 -26.193 1.00 41.51 C
ATOM 12 O2' G B1287 12.741 -68.913 -25.421 1.00 35.13 O
ATOM 13 C1' G B1287 14.754 -70.149 -25.778 1.00 40.33 C
ATOM 14 N9 G B1287 16.206 -69.919 -25.937 1.00 39.16 N
ATOM 15 C8 G B1287 17.007 -70.569 -26.842 1.00 38.00 C
ATOM 16 N7 G B1287 18.254 -70.227 -26.791 1.00 33.57 N
ATOM 17 C5 G B1287 18.274 -69.287 -25.787 1.00 40.08 C
ATOM 18 C6 G B1287 19.367 -68.563 -25.296 1.00 40.48 C
ATOM 19 O6 G B1287 20.510 -68.652 -25.699 1.00 44.26 O
ATOM 20 N1 G B1287 19.018 -67.693 -24.271 1.00 39.59 N
ATOM 21 C2 G B1287 17.729 -67.559 -23.786 1.00 42.44 C
ATOM 22 N2 G B1287 17.554 -66.670 -22.789 1.00 38.70 N
ATOM 23 N3 G B1287 16.682 -68.238 -24.249 1.00 39.12 N
ATOM 24 C4 G B1287 17.030 -69.080 -25.239 1.00 38.04 C
ATOM 25 P G B1288 12.574 -67.157 -28.807 1.00 36.57 P
ATOM 26 OP1 G B1288 11.194 -66.669 -29.087 1.00 41.99 O
ATOM 27 OP2 G B1288 13.514 -67.337 -29.943 1.00 35.55 O
ATOM 28 O5' G B1288 13.220 -66.259 -27.699 1.00 31.71 O
TER
Atoms:
OP1: (12.228,-62.427,-14.407)
OP2: (10.371,-63.135,-16.005)
C3': (14.552,-62.101,-19.093)
C1': (14.645,-64.377,-19.803)
C5': (14.113,-62.726,-16.650)
O4': (14.500,-64.335,-18.406)
C8: (12.122,-64.471,-20.223)
O2': (16.362,-62.861,-20.542)
C6: (11.785,-66.921,-22.680)
C5: (12.062,-65.975,-21.709)
C4: (13.372,-65.832,-21.372)
P: (11.794,-63.204,-15.590)
C4': (14.852,-63.017,-17.920)
C2': (14.963,-62.956,-20.292)
C2: (14.027,-67.377,-22.789)
N1: (12.798,-67.615,-23.210)
N3: (14.416,-66.500,-21.875)
N6: (10.566,-67.173,-23.116)
N7: (11.277,-65.110,-20.984)
N9: (13.407,-64.883,-20.403)
O5': (12.720,-62.875,-16.822)
O3': (15.253,-60.872,-19.014)
OP2: (10.371,-63.135,-16.005)
C3': (14.552,-62.101,-19.093)
C1': (14.645,-64.377,-19.803)
C5': (14.113,-62.726,-16.650)
O4': (14.500,-64.335,-18.406)
C8: (12.122,-64.471,-20.223)
O2': (16.362,-62.861,-20.542)
C6: (11.785,-66.921,-22.680)
C5: (12.062,-65.975,-21.709)
C4: (13.372,-65.832,-21.372)
P: (11.794,-63.204,-15.590)
C4': (14.852,-63.017,-17.920)
C2': (14.963,-62.956,-20.292)
C2: (14.027,-67.377,-22.789)
N1: (12.798,-67.615,-23.210)
N3: (14.416,-66.500,-21.875)
N6: (10.566,-67.173,-23.116)
N7: (11.277,-65.110,-20.984)
N9: (13.407,-64.883,-20.403)
O5': (12.720,-62.875,-16.822)
O3': (15.253,-60.872,-19.014)
OP1: (14.172,-72.378,-31.519)
OP2: (16.646,-72.086,-30.956)
C3': (13.592,-69.267,-27.628)
C1': (14.754,-70.149,-25.778)
C5': (13.545,-71.512,-28.847)
O6: (20.510,-68.652,-25.699)
O4': (14.379,-71.219,-26.613)
C8: (17.007,-70.569,-26.842)
C2: (17.729,-67.559,-23.786)
C6: (19.367,-68.563,-25.296)
C5: (18.274,-69.287,-25.787)
C4: (17.030,-69.080,-25.239)
P: (15.279,-72.443,-30.524)
C4': (13.391,-70.768,-27.561)
C2': (13.926,-68.933,-26.193)
O2': (12.741,-68.913,-25.421)
N1: (19.018,-67.693,-24.271)
N2: (17.554,-66.670,-22.789)
N3: (16.682,-68.238,-24.249)
N7: (18.254,-70.227,-26.791)
N9: (16.206,-69.919,-25.937)
O5': (14.894,-71.616,-29.232)
O3': (12.445,-68.588,-28.089)
OP2: (16.646,-72.086,-30.956)
C3': (13.592,-69.267,-27.628)
C1': (14.754,-70.149,-25.778)
C5': (13.545,-71.512,-28.847)
O6: (20.510,-68.652,-25.699)
O4': (14.379,-71.219,-26.613)
C8: (17.007,-70.569,-26.842)
C2: (17.729,-67.559,-23.786)
C6: (19.367,-68.563,-25.296)
C5: (18.274,-69.287,-25.787)
C4: (17.030,-69.080,-25.239)
P: (15.279,-72.443,-30.524)
C4': (13.391,-70.768,-27.561)
C2': (13.926,-68.933,-26.193)
O2': (12.741,-68.913,-25.421)
N1: (19.018,-67.693,-24.271)
N2: (17.554,-66.670,-22.789)
N3: (16.682,-68.238,-24.249)
N7: (18.254,-70.227,-26.791)
N9: (16.206,-69.919,-25.937)
O5': (14.894,-71.616,-29.232)
O3': (12.445,-68.588,-28.089)
Image (generated by PyMOL):