Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J00:A377:A362
Extra
PDB:
ATOM 1 O3' C A 376 -6.178 25.132 117.275 1.00 29.79 O
ATOM 2 P U A 377 -7.566 25.388 116.516 1.00 39.20 P
ATOM 3 OP1 U A 377 -8.396 26.266 117.391 1.00 63.05 O
ATOM 4 OP2 U A 377 -8.127 24.103 116.025 1.00 63.29 O
ATOM 5 O5' U A 377 -7.101 26.227 115.246 1.00 16.57 O
ATOM 6 C5' U A 377 -6.337 27.418 115.434 1.00 16.57 C
ATOM 7 C4' U A 377 -6.129 28.149 114.141 1.00 17.07 C
ATOM 8 O4' U A 377 -5.093 27.541 113.335 1.00 18.20 O
ATOM 9 C3' U A 377 -7.312 28.269 113.212 1.00 16.57 C
ATOM 10 O3' U A 377 -8.184 29.278 113.650 1.00 16.57 O
ATOM 11 C2' U A 377 -6.631 28.660 111.910 1.00 17.37 C
ATOM 12 O2' U A 377 -6.304 30.033 111.921 1.00 17.63 O
ATOM 13 C1' U A 377 -5.332 27.848 111.976 1.00 18.65 C
ATOM 14 N1 U A 377 -5.376 26.599 111.192 1.00 41.15 N
ATOM 15 C2 U A 377 -4.313 26.338 110.350 1.00 42.48 C
ATOM 16 O2 U A 377 -3.333 27.056 110.277 1.00 43.46 O
ATOM 17 N3 U A 377 -4.440 25.204 109.587 1.00 44.28 N
ATOM 18 C4 U A 377 -5.499 24.323 109.576 1.00 43.44 C
ATOM 19 O4 U A 377 -5.538 23.441 108.714 1.00 43.96 O
ATOM 20 C5 U A 377 -6.541 24.636 110.503 1.00 42.62 C
ATOM 21 C6 U A 377 -6.446 25.729 111.261 1.00 41.26 C
ATOM 22 P G A 378 -9.750 28.978 113.756 1.00 35.50 P
ATOM 23 OP1 G A 378 -10.094 28.841 115.191 1.00 35.85 O
ATOM 24 OP2 G A 378 -10.107 27.888 112.819 1.00 35.28 O
ATOM 25 O5' G A 378 -10.387 30.322 113.204 1.00 43.24 O
TER
ATOM 1 O3' G B 361 -14.124 19.354 110.834 1.00 6.23 O
ATOM 2 P C B 362 -13.227 19.200 112.156 1.00 56.98 P
ATOM 3 OP1 C B 362 -12.596 17.856 112.125 1.00 49.95 O
ATOM 4 OP2 C B 362 -14.087 19.580 113.312 1.00 48.21 O
ATOM 5 O5' C B 362 -12.098 20.303 111.944 1.00 13.09 O
ATOM 6 C5' C B 362 -10.794 19.952 111.468 1.00 16.30 C
ATOM 7 C4' C B 362 -10.719 20.077 109.959 1.00 16.18 C
ATOM 8 O4' C B 362 -11.016 21.437 109.520 1.00 14.85 O
ATOM 9 C3' C B 362 -9.343 19.739 109.385 1.00 16.43 C
ATOM 10 O3' C B 362 -9.518 19.099 108.123 1.00 17.08 O
ATOM 11 C2' C B 362 -8.721 21.109 109.141 1.00 15.52 C
ATOM 12 O2' C B 362 -7.759 21.128 108.108 1.00 15.99 O
ATOM 13 C1' C B 362 -9.943 21.928 108.731 1.00 14.98 C
ATOM 14 N1 C B 362 -9.757 23.370 108.981 1.00 31.99 N
ATOM 15 C2 C B 362 -8.893 24.094 108.141 1.00 31.96 C
ATOM 16 O2 C B 362 -8.325 23.512 107.198 1.00 33.30 O
ATOM 17 N3 C B 362 -8.699 25.405 108.379 1.00 30.58 N
ATOM 18 C4 C B 362 -9.324 26.001 109.393 1.00 29.25 C
ATOM 19 N4 C B 362 -9.096 27.298 109.588 1.00 26.15 N
ATOM 20 C5 C B 362 -10.209 25.296 110.253 1.00 30.70 C
ATOM 21 C6 C B 362 -10.397 23.997 110.014 1.00 32.17 C
ATOM 22 P A B 363 -9.372 17.502 107.991 1.00 57.30 P
ATOM 23 OP1 A B 363 -10.143 16.848 109.090 1.00 75.25 O
ATOM 24 OP2 A B 363 -7.932 17.163 107.792 1.00 75.59 O
ATOM 25 O5' A B 363 -10.163 17.233 106.638 1.00 0.87 O
TER
ATOM 2 P U A 377 -7.566 25.388 116.516 1.00 39.20 P
ATOM 3 OP1 U A 377 -8.396 26.266 117.391 1.00 63.05 O
ATOM 4 OP2 U A 377 -8.127 24.103 116.025 1.00 63.29 O
ATOM 5 O5' U A 377 -7.101 26.227 115.246 1.00 16.57 O
ATOM 6 C5' U A 377 -6.337 27.418 115.434 1.00 16.57 C
ATOM 7 C4' U A 377 -6.129 28.149 114.141 1.00 17.07 C
ATOM 8 O4' U A 377 -5.093 27.541 113.335 1.00 18.20 O
ATOM 9 C3' U A 377 -7.312 28.269 113.212 1.00 16.57 C
ATOM 10 O3' U A 377 -8.184 29.278 113.650 1.00 16.57 O
ATOM 11 C2' U A 377 -6.631 28.660 111.910 1.00 17.37 C
ATOM 12 O2' U A 377 -6.304 30.033 111.921 1.00 17.63 O
ATOM 13 C1' U A 377 -5.332 27.848 111.976 1.00 18.65 C
ATOM 14 N1 U A 377 -5.376 26.599 111.192 1.00 41.15 N
ATOM 15 C2 U A 377 -4.313 26.338 110.350 1.00 42.48 C
ATOM 16 O2 U A 377 -3.333 27.056 110.277 1.00 43.46 O
ATOM 17 N3 U A 377 -4.440 25.204 109.587 1.00 44.28 N
ATOM 18 C4 U A 377 -5.499 24.323 109.576 1.00 43.44 C
ATOM 19 O4 U A 377 -5.538 23.441 108.714 1.00 43.96 O
ATOM 20 C5 U A 377 -6.541 24.636 110.503 1.00 42.62 C
ATOM 21 C6 U A 377 -6.446 25.729 111.261 1.00 41.26 C
ATOM 22 P G A 378 -9.750 28.978 113.756 1.00 35.50 P
ATOM 23 OP1 G A 378 -10.094 28.841 115.191 1.00 35.85 O
ATOM 24 OP2 G A 378 -10.107 27.888 112.819 1.00 35.28 O
ATOM 25 O5' G A 378 -10.387 30.322 113.204 1.00 43.24 O
TER
ATOM 1 O3' G B 361 -14.124 19.354 110.834 1.00 6.23 O
ATOM 2 P C B 362 -13.227 19.200 112.156 1.00 56.98 P
ATOM 3 OP1 C B 362 -12.596 17.856 112.125 1.00 49.95 O
ATOM 4 OP2 C B 362 -14.087 19.580 113.312 1.00 48.21 O
ATOM 5 O5' C B 362 -12.098 20.303 111.944 1.00 13.09 O
ATOM 6 C5' C B 362 -10.794 19.952 111.468 1.00 16.30 C
ATOM 7 C4' C B 362 -10.719 20.077 109.959 1.00 16.18 C
ATOM 8 O4' C B 362 -11.016 21.437 109.520 1.00 14.85 O
ATOM 9 C3' C B 362 -9.343 19.739 109.385 1.00 16.43 C
ATOM 10 O3' C B 362 -9.518 19.099 108.123 1.00 17.08 O
ATOM 11 C2' C B 362 -8.721 21.109 109.141 1.00 15.52 C
ATOM 12 O2' C B 362 -7.759 21.128 108.108 1.00 15.99 O
ATOM 13 C1' C B 362 -9.943 21.928 108.731 1.00 14.98 C
ATOM 14 N1 C B 362 -9.757 23.370 108.981 1.00 31.99 N
ATOM 15 C2 C B 362 -8.893 24.094 108.141 1.00 31.96 C
ATOM 16 O2 C B 362 -8.325 23.512 107.198 1.00 33.30 O
ATOM 17 N3 C B 362 -8.699 25.405 108.379 1.00 30.58 N
ATOM 18 C4 C B 362 -9.324 26.001 109.393 1.00 29.25 C
ATOM 19 N4 C B 362 -9.096 27.298 109.588 1.00 26.15 N
ATOM 20 C5 C B 362 -10.209 25.296 110.253 1.00 30.70 C
ATOM 21 C6 C B 362 -10.397 23.997 110.014 1.00 32.17 C
ATOM 22 P A B 363 -9.372 17.502 107.991 1.00 57.30 P
ATOM 23 OP1 A B 363 -10.143 16.848 109.090 1.00 75.25 O
ATOM 24 OP2 A B 363 -7.932 17.163 107.792 1.00 75.59 O
ATOM 25 O5' A B 363 -10.163 17.233 106.638 1.00 0.87 O
TER
Atoms:
C4: (-5.499,24.323,109.576)
N3: (-4.440,25.204,109.587)
OP1: (-8.396,26.266,117.391)
OP2: (-8.127,24.103,116.025)
C2: (-4.313,26.338,110.350)
C1': (-5.332,27.848,111.976)
C3': (-7.312,28.269,113.212)
O5': (-7.101,26.227,115.246)
O4': (-5.093,27.541,113.335)
C5': (-6.337,27.418,115.434)
P: (-7.566,25.388,116.516)
C4': (-6.129,28.149,114.141)
C2': (-6.631,28.660,111.910)
O2': (-6.304,30.033,111.921)
N1: (-5.376,26.599,111.192)
O4: (-5.538,23.441,108.714)
O2: (-3.333,27.056,110.277)
C6: (-6.446,25.729,111.261)
C5: (-6.541,24.636,110.503)
O3': (-8.184,29.278,113.650)
N3: (-4.440,25.204,109.587)
OP1: (-8.396,26.266,117.391)
OP2: (-8.127,24.103,116.025)
C2: (-4.313,26.338,110.350)
C1': (-5.332,27.848,111.976)
C3': (-7.312,28.269,113.212)
O5': (-7.101,26.227,115.246)
O4': (-5.093,27.541,113.335)
C5': (-6.337,27.418,115.434)
P: (-7.566,25.388,116.516)
C4': (-6.129,28.149,114.141)
C2': (-6.631,28.660,111.910)
O2': (-6.304,30.033,111.921)
N1: (-5.376,26.599,111.192)
O4: (-5.538,23.441,108.714)
O2: (-3.333,27.056,110.277)
C6: (-6.446,25.729,111.261)
C5: (-6.541,24.636,110.503)
O3': (-8.184,29.278,113.650)
C2: (-8.893,24.094,108.141)
OP1: (-12.596,17.856,112.125)
OP2: (-14.087,19.580,113.312)
C4: (-9.324,26.001,109.393)
O5': (-12.098,20.303,111.944)
C3': (-9.343,19.739,109.385)
C1': (-9.943,21.928,108.731)
O4': (-11.016,21.437,109.520)
C5': (-10.794,19.952,111.468)
P: (-13.227,19.200,112.156)
O2: (-8.325,23.512,107.198)
C4': (-10.719,20.077,109.959)
C2': (-8.721,21.109,109.141)
O2': (-7.759,21.128,108.108)
N1: (-9.757,23.370,108.981)
N3: (-8.699,25.405,108.379)
N4: (-9.096,27.298,109.588)
C6: (-10.397,23.997,110.014)
C5: (-10.209,25.296,110.253)
O3': (-9.518,19.099,108.123)
OP1: (-12.596,17.856,112.125)
OP2: (-14.087,19.580,113.312)
C4: (-9.324,26.001,109.393)
O5': (-12.098,20.303,111.944)
C3': (-9.343,19.739,109.385)
C1': (-9.943,21.928,108.731)
O4': (-11.016,21.437,109.520)
C5': (-10.794,19.952,111.468)
P: (-13.227,19.200,112.156)
O2: (-8.325,23.512,107.198)
C4': (-10.719,20.077,109.959)
C2': (-8.721,21.109,109.141)
O2': (-7.759,21.128,108.108)
N1: (-9.757,23.370,108.981)
N3: (-8.699,25.405,108.379)
N4: (-9.096,27.298,109.588)
C6: (-10.397,23.997,110.014)
C5: (-10.209,25.296,110.253)
O3': (-9.518,19.099,108.123)
Image (generated by PyMOL):