Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:01897:01852
Extra
PDB:
ATOM 1 O3' G A1896 124.292 107.699 78.545 1.00 48.67 O
ATOM 2 P U A1897 123.832 107.975 80.057 1.00 50.30 P
ATOM 3 OP1 U A1897 124.884 108.802 80.709 1.00 50.37 O
ATOM 4 OP2 U A1897 123.440 106.673 80.660 1.00 48.06 O
ATOM 5 O5' U A1897 122.533 108.875 79.877 1.00 50.63 O
ATOM 6 C5' U A1897 122.626 110.167 79.244 1.00 50.43 C
ATOM 7 C4' U A1897 121.250 110.736 78.991 1.00 49.50 C
ATOM 8 O4' U A1897 120.556 109.920 78.018 1.00 50.43 O
ATOM 9 C3' U A1897 120.302 110.789 80.177 1.00 47.17 C
ATOM 10 O3' U A1897 120.552 111.934 80.979 1.00 45.71 O
ATOM 11 C2' U A1897 118.952 110.872 79.484 1.00 47.81 C
ATOM 12 O2' U A1897 118.724 112.162 78.960 1.00 48.97 O
ATOM 13 C1' U A1897 119.167 109.925 78.304 1.00 49.40 C
ATOM 14 N1 U A1897 118.731 108.540 78.547 1.00 50.49 N
ATOM 15 C2 U A1897 117.435 108.209 78.220 1.00 50.79 C
ATOM 16 O2 U A1897 116.643 109.011 77.767 1.00 52.91 O
ATOM 17 N3 U A1897 117.096 106.900 78.445 1.00 51.62 N
ATOM 18 C4 U A1897 117.898 105.911 78.959 1.00 51.46 C
ATOM 19 O4 U A1897 117.446 104.776 79.092 1.00 53.12 O
ATOM 20 C5 U A1897 119.219 106.329 79.285 1.00 52.38 C
ATOM 21 C6 U A1897 119.583 107.597 79.075 1.00 52.06 C
ATOM 22 P C A1898 120.110 111.938 82.520 1.00 46.44 P
ATOM 23 OP1 C A1898 120.561 113.215 83.129 1.00 47.90 O
ATOM 24 OP2 C A1898 120.503 110.652 83.142 1.00 45.96 O
ATOM 25 O5' C A1898 118.524 111.969 82.458 1.00 48.85 O
TER
ATOM 1 O3' C B1851 119.469 103.149 88.317 1.00 52.95 O
ATOM 2 P C B1852 120.077 103.173 86.832 1.00 54.99 P
ATOM 3 OP1 C B1852 120.443 101.777 86.481 1.00 54.60 O
ATOM 4 OP2 C B1852 121.111 104.245 86.772 1.00 53.95 O
ATOM 5 O5' C B1852 118.845 103.595 85.914 1.00 54.98 O
ATOM 6 C5' C B1852 117.654 102.791 85.878 1.00 55.05 C
ATOM 7 C4' C B1852 117.237 102.533 84.450 1.00 54.77 C
ATOM 8 O4' C B1852 116.684 103.745 83.873 1.00 54.46 O
ATOM 9 C3' C B1852 118.338 102.077 83.496 1.00 54.60 C
ATOM 10 O3' C B1852 117.751 101.236 82.512 1.00 56.06 O
ATOM 11 C2' C B1852 118.739 103.382 82.818 1.00 54.06 C
ATOM 12 O2' C B1852 119.324 103.195 81.544 1.00 53.16 O
ATOM 13 C1' C B1852 117.373 104.046 82.678 1.00 54.03 C
ATOM 14 N1 C B1852 117.336 105.503 82.468 1.00 53.09 N
ATOM 15 C2 C B1852 116.285 106.037 81.711 1.00 51.54 C
ATOM 16 O2 C B1852 115.429 105.269 81.233 1.00 48.31 O
ATOM 17 N3 C B1852 116.226 107.374 81.521 1.00 51.58 N
ATOM 18 C4 C B1852 117.156 108.167 82.052 1.00 50.39 C
ATOM 19 N4 C B1852 117.042 109.476 81.855 1.00 49.06 N
ATOM 20 C5 C B1852 118.240 107.651 82.816 1.00 52.07 C
ATOM 21 C6 C B1852 118.292 106.326 82.999 1.00 52.99 C
ATOM 22 P A B1853 117.956 99.651 82.587 1.00 56.41 P
ATOM 23 OP1 A B1853 119.098 99.359 83.497 1.00 55.13 O
ATOM 24 OP2 A B1853 117.974 99.153 81.185 1.00 54.23 O
ATOM 25 O5' A B1853 116.621 99.115 83.266 1.00 55.02 O
TER
ATOM 2 P U A1897 123.832 107.975 80.057 1.00 50.30 P
ATOM 3 OP1 U A1897 124.884 108.802 80.709 1.00 50.37 O
ATOM 4 OP2 U A1897 123.440 106.673 80.660 1.00 48.06 O
ATOM 5 O5' U A1897 122.533 108.875 79.877 1.00 50.63 O
ATOM 6 C5' U A1897 122.626 110.167 79.244 1.00 50.43 C
ATOM 7 C4' U A1897 121.250 110.736 78.991 1.00 49.50 C
ATOM 8 O4' U A1897 120.556 109.920 78.018 1.00 50.43 O
ATOM 9 C3' U A1897 120.302 110.789 80.177 1.00 47.17 C
ATOM 10 O3' U A1897 120.552 111.934 80.979 1.00 45.71 O
ATOM 11 C2' U A1897 118.952 110.872 79.484 1.00 47.81 C
ATOM 12 O2' U A1897 118.724 112.162 78.960 1.00 48.97 O
ATOM 13 C1' U A1897 119.167 109.925 78.304 1.00 49.40 C
ATOM 14 N1 U A1897 118.731 108.540 78.547 1.00 50.49 N
ATOM 15 C2 U A1897 117.435 108.209 78.220 1.00 50.79 C
ATOM 16 O2 U A1897 116.643 109.011 77.767 1.00 52.91 O
ATOM 17 N3 U A1897 117.096 106.900 78.445 1.00 51.62 N
ATOM 18 C4 U A1897 117.898 105.911 78.959 1.00 51.46 C
ATOM 19 O4 U A1897 117.446 104.776 79.092 1.00 53.12 O
ATOM 20 C5 U A1897 119.219 106.329 79.285 1.00 52.38 C
ATOM 21 C6 U A1897 119.583 107.597 79.075 1.00 52.06 C
ATOM 22 P C A1898 120.110 111.938 82.520 1.00 46.44 P
ATOM 23 OP1 C A1898 120.561 113.215 83.129 1.00 47.90 O
ATOM 24 OP2 C A1898 120.503 110.652 83.142 1.00 45.96 O
ATOM 25 O5' C A1898 118.524 111.969 82.458 1.00 48.85 O
TER
ATOM 1 O3' C B1851 119.469 103.149 88.317 1.00 52.95 O
ATOM 2 P C B1852 120.077 103.173 86.832 1.00 54.99 P
ATOM 3 OP1 C B1852 120.443 101.777 86.481 1.00 54.60 O
ATOM 4 OP2 C B1852 121.111 104.245 86.772 1.00 53.95 O
ATOM 5 O5' C B1852 118.845 103.595 85.914 1.00 54.98 O
ATOM 6 C5' C B1852 117.654 102.791 85.878 1.00 55.05 C
ATOM 7 C4' C B1852 117.237 102.533 84.450 1.00 54.77 C
ATOM 8 O4' C B1852 116.684 103.745 83.873 1.00 54.46 O
ATOM 9 C3' C B1852 118.338 102.077 83.496 1.00 54.60 C
ATOM 10 O3' C B1852 117.751 101.236 82.512 1.00 56.06 O
ATOM 11 C2' C B1852 118.739 103.382 82.818 1.00 54.06 C
ATOM 12 O2' C B1852 119.324 103.195 81.544 1.00 53.16 O
ATOM 13 C1' C B1852 117.373 104.046 82.678 1.00 54.03 C
ATOM 14 N1 C B1852 117.336 105.503 82.468 1.00 53.09 N
ATOM 15 C2 C B1852 116.285 106.037 81.711 1.00 51.54 C
ATOM 16 O2 C B1852 115.429 105.269 81.233 1.00 48.31 O
ATOM 17 N3 C B1852 116.226 107.374 81.521 1.00 51.58 N
ATOM 18 C4 C B1852 117.156 108.167 82.052 1.00 50.39 C
ATOM 19 N4 C B1852 117.042 109.476 81.855 1.00 49.06 N
ATOM 20 C5 C B1852 118.240 107.651 82.816 1.00 52.07 C
ATOM 21 C6 C B1852 118.292 106.326 82.999 1.00 52.99 C
ATOM 22 P A B1853 117.956 99.651 82.587 1.00 56.41 P
ATOM 23 OP1 A B1853 119.098 99.359 83.497 1.00 55.13 O
ATOM 24 OP2 A B1853 117.974 99.153 81.185 1.00 54.23 O
ATOM 25 O5' A B1853 116.621 99.115 83.266 1.00 55.02 O
TER
Atoms:
C4: (117.898,105.911,78.959)
N3: (117.096,106.900,78.445)
OP1: (124.884,108.802,80.709)
OP2: (123.440,106.673,80.660)
C2: (117.435,108.209,78.220)
C1': (119.167,109.925,78.304)
C3': (120.302,110.789,80.177)
O5': (122.533,108.875,79.877)
O4': (120.556,109.920,78.018)
C5': (122.626,110.167,79.244)
P: (123.832,107.975,80.057)
C4': (121.250,110.736,78.991)
C2': (118.952,110.872,79.484)
O2': (118.724,112.162,78.960)
N1: (118.731,108.540,78.547)
O4: (117.446,104.776,79.092)
O2: (116.643,109.011,77.767)
C6: (119.583,107.597,79.075)
C5: (119.219,106.329,79.285)
O3': (120.552,111.934,80.979)
N3: (117.096,106.900,78.445)
OP1: (124.884,108.802,80.709)
OP2: (123.440,106.673,80.660)
C2: (117.435,108.209,78.220)
C1': (119.167,109.925,78.304)
C3': (120.302,110.789,80.177)
O5': (122.533,108.875,79.877)
O4': (120.556,109.920,78.018)
C5': (122.626,110.167,79.244)
P: (123.832,107.975,80.057)
C4': (121.250,110.736,78.991)
C2': (118.952,110.872,79.484)
O2': (118.724,112.162,78.960)
N1: (118.731,108.540,78.547)
O4: (117.446,104.776,79.092)
O2: (116.643,109.011,77.767)
C6: (119.583,107.597,79.075)
C5: (119.219,106.329,79.285)
O3': (120.552,111.934,80.979)
C2: (116.285,106.037,81.711)
OP1: (120.443,101.777,86.481)
OP2: (121.111,104.245,86.772)
C4: (117.156,108.167,82.052)
O5': (118.845,103.595,85.914)
C3': (118.338,102.077,83.496)
C1': (117.373,104.046,82.678)
O4': (116.684,103.745,83.873)
C5': (117.654,102.791,85.878)
P: (120.077,103.173,86.832)
O2: (115.429,105.269,81.233)
C4': (117.237,102.533,84.450)
C2': (118.739,103.382,82.818)
O2': (119.324,103.195,81.544)
N1: (117.336,105.503,82.468)
N3: (116.226,107.374,81.521)
N4: (117.042,109.476,81.855)
C6: (118.292,106.326,82.999)
C5: (118.240,107.651,82.816)
O3': (117.751,101.236,82.512)
OP1: (120.443,101.777,86.481)
OP2: (121.111,104.245,86.772)
C4: (117.156,108.167,82.052)
O5': (118.845,103.595,85.914)
C3': (118.338,102.077,83.496)
C1': (117.373,104.046,82.678)
O4': (116.684,103.745,83.873)
C5': (117.654,102.791,85.878)
P: (120.077,103.173,86.832)
O2: (115.429,105.269,81.233)
C4': (117.237,102.533,84.450)
C2': (118.739,103.382,82.818)
O2': (119.324,103.195,81.544)
N1: (117.336,105.503,82.468)
N3: (116.226,107.374,81.521)
N4: (117.042,109.476,81.855)
C6: (118.292,106.326,82.999)
C5: (118.240,107.651,82.816)
O3': (117.751,101.236,82.512)
Image (generated by PyMOL):