Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:02333:02334
Extra
PDB:
ATOM 1 O3' G A2332 54.706 103.637 113.486 1.00 41.53 O
ATOM 2 P U A2333 55.225 103.564 115.009 1.00 41.84 P
ATOM 3 OP1 U A2333 54.221 102.756 115.758 1.00 39.92 O
ATOM 4 OP2 U A2333 55.553 104.939 115.474 1.00 40.57 O
ATOM 5 O5' U A2333 56.574 102.728 114.881 1.00 39.39 O
ATOM 6 C5' U A2333 56.554 101.413 114.309 1.00 40.19 C
ATOM 7 C4' U A2333 57.954 100.894 114.126 1.00 41.02 C
ATOM 8 O4' U A2333 58.664 101.715 113.172 1.00 42.21 O
ATOM 9 C3' U A2333 58.837 100.898 115.355 1.00 40.31 C
ATOM 10 O3' U A2333 58.551 99.732 116.123 1.00 43.28 O
ATOM 11 C2' U A2333 60.230 100.864 114.737 1.00 39.57 C
ATOM 12 O2' U A2333 60.568 99.573 114.274 1.00 37.42 O
ATOM 13 C1' U A2333 60.036 101.746 113.502 1.00 40.35 C
ATOM 14 N1 U A2333 60.441 103.155 113.614 1.00 42.80 N
ATOM 15 C2 U A2333 61.770 103.479 113.380 1.00 44.10 C
ATOM 16 O2 U A2333 62.635 102.646 113.166 1.00 45.38 O
ATOM 17 N3 U A2333 62.050 104.822 113.407 1.00 43.90 N
ATOM 18 C4 U A2333 61.166 105.852 113.650 1.00 44.24 C
ATOM 19 O4 U A2333 61.542 107.015 113.496 1.00 45.94 O
ATOM 20 C5 U A2333 59.826 105.434 113.933 1.00 43.66 C
ATOM 21 C6 U A2333 59.518 104.136 113.908 1.00 43.00 C
ATOM 22 P C A2334 58.478 99.818 117.727 1.00 44.37 P
ATOM 23 OP1 C A2334 58.058 98.477 118.211 1.00 42.89 O
ATOM 24 OP2 C A2334 57.693 101.011 118.110 1.00 44.20 O
ATOM 25 O5' C A2334 59.991 100.063 118.158 1.00 43.76 O
TER
ATOM 1 O3' U B2333 58.551 99.732 116.123 1.00 43.28 O
ATOM 2 P C B2334 58.478 99.818 117.727 1.00 44.37 P
ATOM 3 OP1 C B2334 58.058 98.477 118.211 1.00 42.89 O
ATOM 4 OP2 C B2334 57.693 101.011 118.110 1.00 44.20 O
ATOM 5 O5' C B2334 59.991 100.063 118.158 1.00 43.76 O
ATOM 6 C5' C B2334 61.037 99.196 117.682 1.00 43.07 C
ATOM 7 C4' C B2334 62.388 99.775 118.017 1.00 43.45 C
ATOM 8 O4' C B2334 62.645 100.956 117.196 1.00 44.15 O
ATOM 9 C3' C B2334 62.547 100.231 119.469 1.00 43.49 C
ATOM 10 O3' C B2334 63.880 99.960 119.877 1.00 45.30 O
ATOM 11 C2' C B2334 62.384 101.743 119.349 1.00 42.54 C
ATOM 12 O2' C B2334 62.975 102.497 120.383 1.00 39.38 O
ATOM 13 C1' C B2334 63.116 101.982 118.035 1.00 43.57 C
ATOM 14 N1 C B2334 62.949 103.310 117.407 1.00 45.01 N
ATOM 15 C2 C B2334 61.690 103.942 117.405 1.00 45.65 C
ATOM 16 O2 C B2334 60.684 103.303 117.764 1.00 46.17 O
ATOM 17 N3 C B2334 61.606 105.231 116.999 1.00 45.08 N
ATOM 18 C4 C B2334 62.697 105.868 116.568 1.00 44.90 C
ATOM 19 N4 C B2334 62.583 107.160 116.246 1.00 45.51 N
ATOM 20 C5 C B2334 63.958 105.218 116.465 1.00 44.74 C
ATOM 21 C6 C B2334 64.038 103.952 116.887 1.00 44.30 C
ATOM 22 P G B2335 64.218 98.611 120.675 1.00 45.27 P
ATOM 23 OP1 G B2335 63.248 97.570 120.251 1.00 42.68 O
ATOM 24 OP2 G B2335 64.360 98.953 122.120 1.00 44.07 O
ATOM 25 O5' G B2335 65.656 98.229 120.117 1.00 45.02 O
TER
ATOM 2 P U A2333 55.225 103.564 115.009 1.00 41.84 P
ATOM 3 OP1 U A2333 54.221 102.756 115.758 1.00 39.92 O
ATOM 4 OP2 U A2333 55.553 104.939 115.474 1.00 40.57 O
ATOM 5 O5' U A2333 56.574 102.728 114.881 1.00 39.39 O
ATOM 6 C5' U A2333 56.554 101.413 114.309 1.00 40.19 C
ATOM 7 C4' U A2333 57.954 100.894 114.126 1.00 41.02 C
ATOM 8 O4' U A2333 58.664 101.715 113.172 1.00 42.21 O
ATOM 9 C3' U A2333 58.837 100.898 115.355 1.00 40.31 C
ATOM 10 O3' U A2333 58.551 99.732 116.123 1.00 43.28 O
ATOM 11 C2' U A2333 60.230 100.864 114.737 1.00 39.57 C
ATOM 12 O2' U A2333 60.568 99.573 114.274 1.00 37.42 O
ATOM 13 C1' U A2333 60.036 101.746 113.502 1.00 40.35 C
ATOM 14 N1 U A2333 60.441 103.155 113.614 1.00 42.80 N
ATOM 15 C2 U A2333 61.770 103.479 113.380 1.00 44.10 C
ATOM 16 O2 U A2333 62.635 102.646 113.166 1.00 45.38 O
ATOM 17 N3 U A2333 62.050 104.822 113.407 1.00 43.90 N
ATOM 18 C4 U A2333 61.166 105.852 113.650 1.00 44.24 C
ATOM 19 O4 U A2333 61.542 107.015 113.496 1.00 45.94 O
ATOM 20 C5 U A2333 59.826 105.434 113.933 1.00 43.66 C
ATOM 21 C6 U A2333 59.518 104.136 113.908 1.00 43.00 C
ATOM 22 P C A2334 58.478 99.818 117.727 1.00 44.37 P
ATOM 23 OP1 C A2334 58.058 98.477 118.211 1.00 42.89 O
ATOM 24 OP2 C A2334 57.693 101.011 118.110 1.00 44.20 O
ATOM 25 O5' C A2334 59.991 100.063 118.158 1.00 43.76 O
TER
ATOM 1 O3' U B2333 58.551 99.732 116.123 1.00 43.28 O
ATOM 2 P C B2334 58.478 99.818 117.727 1.00 44.37 P
ATOM 3 OP1 C B2334 58.058 98.477 118.211 1.00 42.89 O
ATOM 4 OP2 C B2334 57.693 101.011 118.110 1.00 44.20 O
ATOM 5 O5' C B2334 59.991 100.063 118.158 1.00 43.76 O
ATOM 6 C5' C B2334 61.037 99.196 117.682 1.00 43.07 C
ATOM 7 C4' C B2334 62.388 99.775 118.017 1.00 43.45 C
ATOM 8 O4' C B2334 62.645 100.956 117.196 1.00 44.15 O
ATOM 9 C3' C B2334 62.547 100.231 119.469 1.00 43.49 C
ATOM 10 O3' C B2334 63.880 99.960 119.877 1.00 45.30 O
ATOM 11 C2' C B2334 62.384 101.743 119.349 1.00 42.54 C
ATOM 12 O2' C B2334 62.975 102.497 120.383 1.00 39.38 O
ATOM 13 C1' C B2334 63.116 101.982 118.035 1.00 43.57 C
ATOM 14 N1 C B2334 62.949 103.310 117.407 1.00 45.01 N
ATOM 15 C2 C B2334 61.690 103.942 117.405 1.00 45.65 C
ATOM 16 O2 C B2334 60.684 103.303 117.764 1.00 46.17 O
ATOM 17 N3 C B2334 61.606 105.231 116.999 1.00 45.08 N
ATOM 18 C4 C B2334 62.697 105.868 116.568 1.00 44.90 C
ATOM 19 N4 C B2334 62.583 107.160 116.246 1.00 45.51 N
ATOM 20 C5 C B2334 63.958 105.218 116.465 1.00 44.74 C
ATOM 21 C6 C B2334 64.038 103.952 116.887 1.00 44.30 C
ATOM 22 P G B2335 64.218 98.611 120.675 1.00 45.27 P
ATOM 23 OP1 G B2335 63.248 97.570 120.251 1.00 42.68 O
ATOM 24 OP2 G B2335 64.360 98.953 122.120 1.00 44.07 O
ATOM 25 O5' G B2335 65.656 98.229 120.117 1.00 45.02 O
TER
Atoms:
C4: (61.166,105.852,113.650)
N3: (62.050,104.822,113.407)
OP1: (54.221,102.756,115.758)
OP2: (55.553,104.939,115.474)
C2: (61.770,103.479,113.380)
C1': (60.036,101.746,113.502)
C3': (58.837,100.898,115.355)
O5': (56.574,102.728,114.881)
O4': (58.664,101.715,113.172)
C5': (56.554,101.413,114.309)
P: (55.225,103.564,115.009)
C4': (57.954,100.894,114.126)
C2': (60.230,100.864,114.737)
O2': (60.568,99.573,114.274)
N1: (60.441,103.155,113.614)
O4: (61.542,107.015,113.496)
O2: (62.635,102.646,113.166)
C6: (59.518,104.136,113.908)
C5: (59.826,105.434,113.933)
O3': (58.551,99.732,116.123)
N3: (62.050,104.822,113.407)
OP1: (54.221,102.756,115.758)
OP2: (55.553,104.939,115.474)
C2: (61.770,103.479,113.380)
C1': (60.036,101.746,113.502)
C3': (58.837,100.898,115.355)
O5': (56.574,102.728,114.881)
O4': (58.664,101.715,113.172)
C5': (56.554,101.413,114.309)
P: (55.225,103.564,115.009)
C4': (57.954,100.894,114.126)
C2': (60.230,100.864,114.737)
O2': (60.568,99.573,114.274)
N1: (60.441,103.155,113.614)
O4: (61.542,107.015,113.496)
O2: (62.635,102.646,113.166)
C6: (59.518,104.136,113.908)
C5: (59.826,105.434,113.933)
O3': (58.551,99.732,116.123)
C2: (61.690,103.942,117.405)
OP1: (58.058,98.477,118.211)
OP2: (57.693,101.011,118.110)
C4: (62.697,105.868,116.568)
O5': (59.991,100.063,118.158)
C3': (62.547,100.231,119.469)
C1': (63.116,101.982,118.035)
O4': (62.645,100.956,117.196)
C5': (61.037,99.196,117.682)
P: (58.478,99.818,117.727)
O2: (60.684,103.303,117.764)
C4': (62.388,99.775,118.017)
C2': (62.384,101.743,119.349)
O2': (62.975,102.497,120.383)
N1: (62.949,103.310,117.407)
N3: (61.606,105.231,116.999)
N4: (62.583,107.160,116.246)
C6: (64.038,103.952,116.887)
C5: (63.958,105.218,116.465)
O3': (63.880,99.960,119.877)
OP1: (58.058,98.477,118.211)
OP2: (57.693,101.011,118.110)
C4: (62.697,105.868,116.568)
O5': (59.991,100.063,118.158)
C3': (62.547,100.231,119.469)
C1': (63.116,101.982,118.035)
O4': (62.645,100.956,117.196)
C5': (61.037,99.196,117.682)
P: (58.478,99.818,117.727)
O2: (60.684,103.303,117.764)
C4': (62.388,99.775,118.017)
C2': (62.384,101.743,119.349)
O2': (62.975,102.497,120.383)
N1: (62.949,103.310,117.407)
N3: (61.606,105.231,116.999)
N4: (62.583,107.160,116.246)
C6: (64.038,103.952,116.887)
C5: (63.958,105.218,116.465)
O3': (63.880,99.960,119.877)
Image (generated by PyMOL):