ClaRNA

Doublet info:

Details

Nucleotide types: UC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J03:A398:A400

Extra

PDB:
ATOM 1 O3' G A 397 -77.363 -47.428 67.742 1.00 30.90 O
ATOM 2 P U A 398 -78.560 -48.447 67.363 1.00 23.34 P
ATOM 3 OP1 U A 398 -77.953 -49.800 67.345 1.00 57.53 O
ATOM 4 OP2 U A 398 -79.272 -47.951 66.162 1.00 57.53 O
ATOM 5 O5' U A 398 -79.562 -48.381 68.604 1.00 30.50 O
ATOM 6 C5' U A 398 -79.176 -48.876 69.893 1.00 30.50 C
ATOM 7 C4' U A 398 -80.323 -48.762 70.864 1.00 30.50 C
ATOM 8 O4' U A 398 -80.684 -47.375 71.060 1.00 30.50 O
ATOM 9 C3' U A 398 -81.638 -49.413 70.458 1.00 30.50 C
ATOM 10 O3' U A 398 -81.639 -50.782 70.857 1.00 30.50 O
ATOM 11 C2' U A 398 -82.673 -48.673 71.311 1.00 30.50 C
ATOM 12 O2' U A 398 -82.943 -49.367 72.515 1.00 30.50 O
ATOM 13 C1' U A 398 -81.972 -47.343 71.634 1.00 30.50 C
ATOM 14 N1 U A 398 -82.691 -46.105 71.274 1.00 45.06 N
ATOM 15 C2 U A 398 -83.086 -45.277 72.321 1.00 45.06 C
ATOM 16 O2 U A 398 -82.810 -45.499 73.489 1.00 45.06 O
ATOM 17 N3 U A 398 -83.816 -44.175 71.955 1.00 45.06 N
ATOM 18 C4 U A 398 -84.178 -43.804 70.685 1.00 45.06 C
ATOM 19 O4 U A 398 -84.879 -42.796 70.523 1.00 45.06 O
ATOM 20 C5 U A 398 -83.709 -44.686 69.655 1.00 45.06 C
ATOM 21 C6 U A 398 -82.995 -45.779 69.979 1.00 45.06 C
ATOM 22 P U A 399 -82.108 -51.935 69.832 1.00 34.32 P
ATOM 23 OP1 U A 399 -82.097 -53.217 70.587 1.00 64.29 O
ATOM 24 OP2 U A 399 -81.312 -51.809 68.590 1.00 64.29 O
ATOM 25 O5' U A 399 -83.631 -51.624 69.490 1.00 26.91 O
TER

ATOM 1 O3' U B 399 -85.277 -49.870 66.751 1.00 26.91 O
ATOM 2 P C B 400 -84.468 -48.495 66.629 1.00 36.95 P
ATOM 3 OP1 C B 400 -84.137 -48.291 65.203 1.00 26.21 O
ATOM 4 OP2 C B 400 -83.387 -48.497 67.641 1.00 26.21 O
ATOM 5 O5' C B 400 -85.552 -47.403 67.015 1.00 14.32 O
ATOM 6 C5' C B 400 -86.757 -47.288 66.256 1.00 14.32 C
ATOM 7 C4' C B 400 -87.620 -46.167 66.789 1.00 14.32 C
ATOM 8 O4' C B 400 -88.240 -46.550 68.036 1.00 14.32 O
ATOM 9 C3' C B 400 -86.931 -44.833 67.059 1.00 14.32 C
ATOM 10 O3' C B 400 -86.930 -44.106 65.835 1.00 14.32 O
ATOM 11 C2' C B 400 -87.856 -44.199 68.091 1.00 14.32 C
ATOM 12 O2' C B 400 -88.998 -43.674 67.450 1.00 14.32 O
ATOM 13 C1' C B 400 -88.336 -45.417 68.879 1.00 14.32 C
ATOM 14 N1 C B 400 -87.601 -45.705 70.125 1.00 39.78 N
ATOM 15 C2 C B 400 -88.026 -45.110 71.319 1.00 39.78 C
ATOM 16 O2 C B 400 -88.948 -44.284 71.288 1.00 39.78 O
ATOM 17 N3 C B 400 -87.413 -45.445 72.476 1.00 39.78 N
ATOM 18 C4 C B 400 -86.404 -46.310 72.467 1.00 39.78 C
ATOM 19 N4 C B 400 -85.845 -46.621 73.626 1.00 39.78 N
ATOM 20 C5 C B 400 -85.924 -46.896 71.267 1.00 39.78 C
ATOM 21 C6 C B 400 -86.542 -46.568 70.130 1.00 39.78 C
ATOM 22 P G B 401 -86.258 -42.648 65.746 1.00 24.31 P
ATOM 23 OP1 G B 401 -84.822 -42.793 65.413 1.00 22.33 O
ATOM 24 OP2 G B 401 -86.655 -41.845 66.911 1.00 22.33 O
ATOM 25 O5' G B 401 -87.015 -42.013 64.506 1.00 18.81 O
TER

Atoms:
C4: (-84.178,-43.804,70.685)
N3: (-83.816,-44.175,71.955)
OP1: (-77.953,-49.800,67.345)
OP2: (-79.272,-47.951,66.162)
C2: (-83.086,-45.277,72.321)
C1': (-81.972,-47.343,71.634)
C3': (-81.638,-49.413,70.458)
O5': (-79.562,-48.381,68.604)
O4': (-80.684,-47.375,71.060)
C5': (-79.176,-48.876,69.893)
P: (-78.560,-48.447,67.363)
C4': (-80.323,-48.762,70.864)
C2': (-82.673,-48.673,71.311)
O2': (-82.943,-49.367,72.515)
N1: (-82.691,-46.105,71.274)
O4: (-84.879,-42.796,70.523)
O2: (-82.810,-45.499,73.489)
C6: (-82.995,-45.779,69.979)
C5: (-83.709,-44.686,69.655)
O3': (-81.639,-50.782,70.857)
C2: (-88.026,-45.110,71.319)
OP1: (-84.137,-48.291,65.203)
OP2: (-83.387,-48.497,67.641)
C4: (-86.404,-46.310,72.467)
O5': (-85.552,-47.403,67.015)
C3': (-86.931,-44.833,67.059)
C1': (-88.336,-45.417,68.879)
O4': (-88.240,-46.550,68.036)
C5': (-86.757,-47.288,66.256)
P: (-84.468,-48.495,66.629)
O2: (-88.948,-44.284,71.288)
C4': (-87.620,-46.167,66.789)
C2': (-87.856,-44.199,68.091)
O2': (-88.998,-43.674,67.450)
N1: (-87.601,-45.705,70.125)
N3: (-87.413,-45.445,72.476)
N4: (-85.845,-46.621,73.626)
C6: (-86.542,-46.568,70.130)
C5: (-85.924,-46.896,71.267)
O3': (-86.930,-44.106,65.835)
Image (generated by PyMOL):
PyMOL image
show in jmol