Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01897:01852
Extra
PDB:
ATOM 1 O3' G A1896 124.279 107.896 78.620 1.00 54.46 O
ATOM 2 P U A1897 123.807 108.197 80.125 1.00 55.11 P
ATOM 3 OP1 U A1897 124.798 109.098 80.769 1.00 54.75 O
ATOM 4 OP2 U A1897 123.476 106.898 80.760 1.00 54.18 O
ATOM 5 O5' U A1897 122.475 109.042 79.931 1.00 56.04 O
ATOM 6 C5' U A1897 122.533 110.354 79.342 1.00 55.24 C
ATOM 7 C4' U A1897 121.143 110.871 79.059 1.00 52.47 C
ATOM 8 O4' U A1897 120.481 109.994 78.121 1.00 52.44 O
ATOM 9 C3' U A1897 120.187 110.924 80.232 1.00 49.53 C
ATOM 10 O3' U A1897 120.404 112.093 80.996 1.00 48.32 O
ATOM 11 C2' U A1897 118.846 110.968 79.528 1.00 49.84 C
ATOM 12 O2' U A1897 118.628 112.242 78.966 1.00 49.96 O
ATOM 13 C1' U A1897 119.090 109.997 78.376 1.00 51.34 C
ATOM 14 N1 U A1897 118.651 108.613 78.613 1.00 52.39 N
ATOM 15 C2 U A1897 117.334 108.304 78.333 1.00 52.32 C
ATOM 16 O2 U A1897 116.526 109.128 77.949 1.00 52.39 O
ATOM 17 N3 U A1897 116.994 106.990 78.521 1.00 53.32 N
ATOM 18 C4 U A1897 117.811 105.973 78.956 1.00 54.02 C
ATOM 19 O4 U A1897 117.369 104.823 79.003 1.00 55.09 O
ATOM 20 C5 U A1897 119.152 106.373 79.252 1.00 54.14 C
ATOM 21 C6 U A1897 119.517 107.648 79.076 1.00 53.38 C
ATOM 22 P C A1898 120.093 112.075 82.564 1.00 48.94 P
ATOM 23 OP1 C A1898 120.652 113.309 83.173 1.00 49.69 O
ATOM 24 OP2 C A1898 120.492 110.751 83.089 1.00 49.10 O
ATOM 25 O5' C A1898 118.509 112.146 82.639 1.00 50.26 O
TER
ATOM 1 O3' C B1851 119.466 103.297 88.361 1.00 59.30 O
ATOM 2 P C B1852 120.025 103.311 86.855 1.00 61.29 P
ATOM 3 OP1 C B1852 120.352 101.908 86.496 1.00 61.61 O
ATOM 4 OP2 C B1852 121.069 104.362 86.733 1.00 60.76 O
ATOM 5 O5' C B1852 118.766 103.744 85.986 1.00 61.62 O
ATOM 6 C5' C B1852 117.598 102.911 85.936 1.00 61.68 C
ATOM 7 C4' C B1852 117.224 102.625 84.505 1.00 61.64 C
ATOM 8 O4' C B1852 116.658 103.817 83.900 1.00 61.38 O
ATOM 9 C3' C B1852 118.367 102.191 83.593 1.00 61.04 C
ATOM 10 O3' C B1852 117.835 101.328 82.600 1.00 62.94 O
ATOM 11 C2' C B1852 118.764 103.501 82.926 1.00 60.74 C
ATOM 12 O2' C B1852 119.398 103.311 81.676 1.00 60.54 O
ATOM 13 C1' C B1852 117.390 104.142 82.740 1.00 60.59 C
ATOM 14 N1 C B1852 117.344 105.602 82.557 1.00 59.62 N
ATOM 15 C2 C B1852 116.388 106.133 81.690 1.00 58.43 C
ATOM 16 O2 C B1852 115.612 105.360 81.098 1.00 56.42 O
ATOM 17 N3 C B1852 116.328 107.470 81.518 1.00 57.91 N
ATOM 18 C4 C B1852 117.170 108.265 82.174 1.00 57.84 C
ATOM 19 N4 C B1852 117.064 109.574 81.987 1.00 59.18 N
ATOM 20 C5 C B1852 118.156 107.753 83.056 1.00 59.28 C
ATOM 21 C6 C B1852 118.208 106.428 83.220 1.00 59.97 C
ATOM 22 P A B1853 118.006 99.744 82.745 1.00 63.59 P
ATOM 23 OP1 A B1853 119.066 99.481 83.755 1.00 64.11 O
ATOM 24 OP2 A B1853 118.139 99.190 81.370 1.00 63.24 O
ATOM 25 O5' A B1853 116.616 99.241 83.336 1.00 62.07 O
TER
ATOM 2 P U A1897 123.807 108.197 80.125 1.00 55.11 P
ATOM 3 OP1 U A1897 124.798 109.098 80.769 1.00 54.75 O
ATOM 4 OP2 U A1897 123.476 106.898 80.760 1.00 54.18 O
ATOM 5 O5' U A1897 122.475 109.042 79.931 1.00 56.04 O
ATOM 6 C5' U A1897 122.533 110.354 79.342 1.00 55.24 C
ATOM 7 C4' U A1897 121.143 110.871 79.059 1.00 52.47 C
ATOM 8 O4' U A1897 120.481 109.994 78.121 1.00 52.44 O
ATOM 9 C3' U A1897 120.187 110.924 80.232 1.00 49.53 C
ATOM 10 O3' U A1897 120.404 112.093 80.996 1.00 48.32 O
ATOM 11 C2' U A1897 118.846 110.968 79.528 1.00 49.84 C
ATOM 12 O2' U A1897 118.628 112.242 78.966 1.00 49.96 O
ATOM 13 C1' U A1897 119.090 109.997 78.376 1.00 51.34 C
ATOM 14 N1 U A1897 118.651 108.613 78.613 1.00 52.39 N
ATOM 15 C2 U A1897 117.334 108.304 78.333 1.00 52.32 C
ATOM 16 O2 U A1897 116.526 109.128 77.949 1.00 52.39 O
ATOM 17 N3 U A1897 116.994 106.990 78.521 1.00 53.32 N
ATOM 18 C4 U A1897 117.811 105.973 78.956 1.00 54.02 C
ATOM 19 O4 U A1897 117.369 104.823 79.003 1.00 55.09 O
ATOM 20 C5 U A1897 119.152 106.373 79.252 1.00 54.14 C
ATOM 21 C6 U A1897 119.517 107.648 79.076 1.00 53.38 C
ATOM 22 P C A1898 120.093 112.075 82.564 1.00 48.94 P
ATOM 23 OP1 C A1898 120.652 113.309 83.173 1.00 49.69 O
ATOM 24 OP2 C A1898 120.492 110.751 83.089 1.00 49.10 O
ATOM 25 O5' C A1898 118.509 112.146 82.639 1.00 50.26 O
TER
ATOM 1 O3' C B1851 119.466 103.297 88.361 1.00 59.30 O
ATOM 2 P C B1852 120.025 103.311 86.855 1.00 61.29 P
ATOM 3 OP1 C B1852 120.352 101.908 86.496 1.00 61.61 O
ATOM 4 OP2 C B1852 121.069 104.362 86.733 1.00 60.76 O
ATOM 5 O5' C B1852 118.766 103.744 85.986 1.00 61.62 O
ATOM 6 C5' C B1852 117.598 102.911 85.936 1.00 61.68 C
ATOM 7 C4' C B1852 117.224 102.625 84.505 1.00 61.64 C
ATOM 8 O4' C B1852 116.658 103.817 83.900 1.00 61.38 O
ATOM 9 C3' C B1852 118.367 102.191 83.593 1.00 61.04 C
ATOM 10 O3' C B1852 117.835 101.328 82.600 1.00 62.94 O
ATOM 11 C2' C B1852 118.764 103.501 82.926 1.00 60.74 C
ATOM 12 O2' C B1852 119.398 103.311 81.676 1.00 60.54 O
ATOM 13 C1' C B1852 117.390 104.142 82.740 1.00 60.59 C
ATOM 14 N1 C B1852 117.344 105.602 82.557 1.00 59.62 N
ATOM 15 C2 C B1852 116.388 106.133 81.690 1.00 58.43 C
ATOM 16 O2 C B1852 115.612 105.360 81.098 1.00 56.42 O
ATOM 17 N3 C B1852 116.328 107.470 81.518 1.00 57.91 N
ATOM 18 C4 C B1852 117.170 108.265 82.174 1.00 57.84 C
ATOM 19 N4 C B1852 117.064 109.574 81.987 1.00 59.18 N
ATOM 20 C5 C B1852 118.156 107.753 83.056 1.00 59.28 C
ATOM 21 C6 C B1852 118.208 106.428 83.220 1.00 59.97 C
ATOM 22 P A B1853 118.006 99.744 82.745 1.00 63.59 P
ATOM 23 OP1 A B1853 119.066 99.481 83.755 1.00 64.11 O
ATOM 24 OP2 A B1853 118.139 99.190 81.370 1.00 63.24 O
ATOM 25 O5' A B1853 116.616 99.241 83.336 1.00 62.07 O
TER
Atoms:
C4: (117.811,105.973,78.956)
N3: (116.994,106.990,78.521)
OP1: (124.798,109.098,80.769)
OP2: (123.476,106.898,80.760)
C2: (117.334,108.304,78.333)
C1': (119.090,109.997,78.376)
C3': (120.187,110.924,80.232)
O5': (122.475,109.042,79.931)
O4': (120.481,109.994,78.121)
C5': (122.533,110.354,79.342)
P: (123.807,108.197,80.125)
C4': (121.143,110.871,79.059)
C2': (118.846,110.968,79.528)
O2': (118.628,112.242,78.966)
N1: (118.651,108.613,78.613)
O4: (117.369,104.823,79.003)
O2: (116.526,109.128,77.949)
C6: (119.517,107.648,79.076)
C5: (119.152,106.373,79.252)
O3': (120.404,112.093,80.996)
N3: (116.994,106.990,78.521)
OP1: (124.798,109.098,80.769)
OP2: (123.476,106.898,80.760)
C2: (117.334,108.304,78.333)
C1': (119.090,109.997,78.376)
C3': (120.187,110.924,80.232)
O5': (122.475,109.042,79.931)
O4': (120.481,109.994,78.121)
C5': (122.533,110.354,79.342)
P: (123.807,108.197,80.125)
C4': (121.143,110.871,79.059)
C2': (118.846,110.968,79.528)
O2': (118.628,112.242,78.966)
N1: (118.651,108.613,78.613)
O4: (117.369,104.823,79.003)
O2: (116.526,109.128,77.949)
C6: (119.517,107.648,79.076)
C5: (119.152,106.373,79.252)
O3': (120.404,112.093,80.996)
C2: (116.388,106.133,81.690)
OP1: (120.352,101.908,86.496)
OP2: (121.069,104.362,86.733)
C4: (117.170,108.265,82.174)
O5': (118.766,103.744,85.986)
C3': (118.367,102.191,83.593)
C1': (117.390,104.142,82.740)
O4': (116.658,103.817,83.900)
C5': (117.598,102.911,85.936)
P: (120.025,103.311,86.855)
O2: (115.612,105.360,81.098)
C4': (117.224,102.625,84.505)
C2': (118.764,103.501,82.926)
O2': (119.398,103.311,81.676)
N1: (117.344,105.602,82.557)
N3: (116.328,107.470,81.518)
N4: (117.064,109.574,81.987)
C6: (118.208,106.428,83.220)
C5: (118.156,107.753,83.056)
O3': (117.835,101.328,82.600)
OP1: (120.352,101.908,86.496)
OP2: (121.069,104.362,86.733)
C4: (117.170,108.265,82.174)
O5': (118.766,103.744,85.986)
C3': (118.367,102.191,83.593)
C1': (117.390,104.142,82.740)
O4': (116.658,103.817,83.900)
C5': (117.598,102.911,85.936)
P: (120.025,103.311,86.855)
O2: (115.612,105.360,81.098)
C4': (117.224,102.625,84.505)
C2': (118.764,103.501,82.926)
O2': (119.398,103.311,81.676)
N1: (117.344,105.602,82.557)
N3: (116.328,107.470,81.518)
N4: (117.064,109.574,81.987)
C6: (118.208,106.428,83.220)
C5: (118.156,107.753,83.056)
O3': (117.835,101.328,82.600)
Image (generated by PyMOL):