Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:02079:02078
Extra
PDB:
ATOM 1 O3' C A2078 109.833 111.209 32.265 1.00 64.49 O
ATOM 2 P U A2079 111.293 111.249 31.583 1.00 66.72 P
ATOM 3 OP1 U A2079 111.911 112.546 31.963 1.00 66.28 O
ATOM 4 OP2 U A2079 111.123 110.905 30.136 1.00 63.98 O
ATOM 5 O5' U A2079 112.154 110.075 32.227 1.00 65.20 O
ATOM 6 C5' U A2079 113.344 109.633 31.550 1.00 66.52 C
ATOM 7 C4' U A2079 113.912 108.409 32.206 1.00 67.58 C
ATOM 8 O4' U A2079 114.458 108.768 33.497 1.00 67.54 O
ATOM 9 C3' U A2079 112.934 107.273 32.453 1.00 69.84 C
ATOM 10 O3' U A2079 113.657 106.045 32.385 1.00 75.48 O
ATOM 11 C2' U A2079 112.509 107.535 33.898 1.00 68.83 C
ATOM 12 O2' U A2079 112.061 106.386 34.582 1.00 68.26 O
ATOM 13 C1' U A2079 113.828 108.006 34.501 1.00 67.17 C
ATOM 14 N1 U A2079 113.737 108.832 35.713 1.00 65.47 N
ATOM 15 C2 U A2079 114.282 108.317 36.870 1.00 64.40 C
ATOM 16 O2 U A2079 114.737 107.188 36.944 1.00 65.24 O
ATOM 17 N3 U A2079 114.267 109.166 37.944 1.00 63.79 N
ATOM 18 C4 U A2079 113.749 110.440 37.987 1.00 64.97 C
ATOM 19 O4 U A2079 113.887 111.112 39.012 1.00 67.55 O
ATOM 20 C5 U A2079 113.151 110.883 36.764 1.00 64.07 C
ATOM 21 C6 U A2079 113.165 110.085 35.696 1.00 65.16 C
ATOM 22 P G A2080 114.012 105.388 30.956 1.00 78.70 P
ATOM 23 OP1 G A2080 113.011 105.854 29.955 1.00 76.87 O
ATOM 24 OP2 G A2080 114.184 103.926 31.200 1.00 77.11 O
ATOM 25 O5' G A2080 115.446 106.010 30.607 1.00 81.20 O
TER
ATOM 1 O3' G B2077 107.445 105.735 33.772 1.00 64.78 O
ATOM 2 P C B2078 108.894 106.117 33.176 1.00 65.29 P
ATOM 3 OP1 C B2078 108.807 105.915 31.704 1.00 65.38 O
ATOM 4 OP2 C B2078 109.923 105.389 33.965 1.00 63.40 O
ATOM 5 O5' C B2078 109.043 107.677 33.462 1.00 63.03 O
ATOM 6 C5' C B2078 108.102 108.612 32.907 1.00 62.01 C
ATOM 7 C4' C B2078 108.249 109.965 33.559 1.00 61.41 C
ATOM 8 O4' C B2078 107.938 109.875 34.970 1.00 60.20 O
ATOM 9 C3' C B2078 109.634 110.588 33.525 1.00 62.68 C
ATOM 10 O3' C B2078 109.833 111.209 32.265 1.00 64.49 O
ATOM 11 C2' C B2078 109.544 111.605 34.658 1.00 61.53 C
ATOM 12 O2' C B2078 108.848 112.779 34.287 1.00 63.20 O
ATOM 13 C1' C B2078 108.692 110.845 35.679 1.00 59.08 C
ATOM 14 N1 C B2078 109.458 110.170 36.743 1.00 57.02 N
ATOM 15 C2 C B2078 109.767 110.891 37.907 1.00 57.84 C
ATOM 16 O2 C B2078 109.407 112.087 37.996 1.00 59.87 O
ATOM 17 N3 C B2078 110.445 110.271 38.905 1.00 56.21 N
ATOM 18 C4 C B2078 110.806 108.992 38.774 1.00 54.40 C
ATOM 19 N4 C B2078 111.457 108.421 39.790 1.00 54.62 N
ATOM 20 C5 C B2078 110.515 108.243 37.598 1.00 52.98 C
ATOM 21 C6 C B2078 109.851 108.864 36.617 1.00 54.47 C
ATOM 22 P U B2079 111.293 111.249 31.583 1.00 66.72 P
ATOM 23 OP1 U B2079 111.911 112.546 31.963 1.00 66.28 O
ATOM 24 OP2 U B2079 111.123 110.905 30.136 1.00 63.98 O
ATOM 25 O5' U B2079 112.154 110.075 32.227 1.00 65.20 O
TER
ATOM 2 P U A2079 111.293 111.249 31.583 1.00 66.72 P
ATOM 3 OP1 U A2079 111.911 112.546 31.963 1.00 66.28 O
ATOM 4 OP2 U A2079 111.123 110.905 30.136 1.00 63.98 O
ATOM 5 O5' U A2079 112.154 110.075 32.227 1.00 65.20 O
ATOM 6 C5' U A2079 113.344 109.633 31.550 1.00 66.52 C
ATOM 7 C4' U A2079 113.912 108.409 32.206 1.00 67.58 C
ATOM 8 O4' U A2079 114.458 108.768 33.497 1.00 67.54 O
ATOM 9 C3' U A2079 112.934 107.273 32.453 1.00 69.84 C
ATOM 10 O3' U A2079 113.657 106.045 32.385 1.00 75.48 O
ATOM 11 C2' U A2079 112.509 107.535 33.898 1.00 68.83 C
ATOM 12 O2' U A2079 112.061 106.386 34.582 1.00 68.26 O
ATOM 13 C1' U A2079 113.828 108.006 34.501 1.00 67.17 C
ATOM 14 N1 U A2079 113.737 108.832 35.713 1.00 65.47 N
ATOM 15 C2 U A2079 114.282 108.317 36.870 1.00 64.40 C
ATOM 16 O2 U A2079 114.737 107.188 36.944 1.00 65.24 O
ATOM 17 N3 U A2079 114.267 109.166 37.944 1.00 63.79 N
ATOM 18 C4 U A2079 113.749 110.440 37.987 1.00 64.97 C
ATOM 19 O4 U A2079 113.887 111.112 39.012 1.00 67.55 O
ATOM 20 C5 U A2079 113.151 110.883 36.764 1.00 64.07 C
ATOM 21 C6 U A2079 113.165 110.085 35.696 1.00 65.16 C
ATOM 22 P G A2080 114.012 105.388 30.956 1.00 78.70 P
ATOM 23 OP1 G A2080 113.011 105.854 29.955 1.00 76.87 O
ATOM 24 OP2 G A2080 114.184 103.926 31.200 1.00 77.11 O
ATOM 25 O5' G A2080 115.446 106.010 30.607 1.00 81.20 O
TER
ATOM 1 O3' G B2077 107.445 105.735 33.772 1.00 64.78 O
ATOM 2 P C B2078 108.894 106.117 33.176 1.00 65.29 P
ATOM 3 OP1 C B2078 108.807 105.915 31.704 1.00 65.38 O
ATOM 4 OP2 C B2078 109.923 105.389 33.965 1.00 63.40 O
ATOM 5 O5' C B2078 109.043 107.677 33.462 1.00 63.03 O
ATOM 6 C5' C B2078 108.102 108.612 32.907 1.00 62.01 C
ATOM 7 C4' C B2078 108.249 109.965 33.559 1.00 61.41 C
ATOM 8 O4' C B2078 107.938 109.875 34.970 1.00 60.20 O
ATOM 9 C3' C B2078 109.634 110.588 33.525 1.00 62.68 C
ATOM 10 O3' C B2078 109.833 111.209 32.265 1.00 64.49 O
ATOM 11 C2' C B2078 109.544 111.605 34.658 1.00 61.53 C
ATOM 12 O2' C B2078 108.848 112.779 34.287 1.00 63.20 O
ATOM 13 C1' C B2078 108.692 110.845 35.679 1.00 59.08 C
ATOM 14 N1 C B2078 109.458 110.170 36.743 1.00 57.02 N
ATOM 15 C2 C B2078 109.767 110.891 37.907 1.00 57.84 C
ATOM 16 O2 C B2078 109.407 112.087 37.996 1.00 59.87 O
ATOM 17 N3 C B2078 110.445 110.271 38.905 1.00 56.21 N
ATOM 18 C4 C B2078 110.806 108.992 38.774 1.00 54.40 C
ATOM 19 N4 C B2078 111.457 108.421 39.790 1.00 54.62 N
ATOM 20 C5 C B2078 110.515 108.243 37.598 1.00 52.98 C
ATOM 21 C6 C B2078 109.851 108.864 36.617 1.00 54.47 C
ATOM 22 P U B2079 111.293 111.249 31.583 1.00 66.72 P
ATOM 23 OP1 U B2079 111.911 112.546 31.963 1.00 66.28 O
ATOM 24 OP2 U B2079 111.123 110.905 30.136 1.00 63.98 O
ATOM 25 O5' U B2079 112.154 110.075 32.227 1.00 65.20 O
TER
Atoms:
C4: (113.749,110.440,37.987)
N3: (114.267,109.166,37.944)
OP1: (111.911,112.546,31.963)
OP2: (111.123,110.905,30.136)
C2: (114.282,108.317,36.870)
C1': (113.828,108.006,34.501)
C3': (112.934,107.273,32.453)
O5': (112.154,110.075,32.227)
O4': (114.458,108.768,33.497)
C5': (113.344,109.633,31.550)
P: (111.293,111.249,31.583)
C4': (113.912,108.409,32.206)
C2': (112.509,107.535,33.898)
O2': (112.061,106.386,34.582)
N1: (113.737,108.832,35.713)
O4: (113.887,111.112,39.012)
O2: (114.737,107.188,36.944)
C6: (113.165,110.085,35.696)
C5: (113.151,110.883,36.764)
O3': (113.657,106.045,32.385)
N3: (114.267,109.166,37.944)
OP1: (111.911,112.546,31.963)
OP2: (111.123,110.905,30.136)
C2: (114.282,108.317,36.870)
C1': (113.828,108.006,34.501)
C3': (112.934,107.273,32.453)
O5': (112.154,110.075,32.227)
O4': (114.458,108.768,33.497)
C5': (113.344,109.633,31.550)
P: (111.293,111.249,31.583)
C4': (113.912,108.409,32.206)
C2': (112.509,107.535,33.898)
O2': (112.061,106.386,34.582)
N1: (113.737,108.832,35.713)
O4: (113.887,111.112,39.012)
O2: (114.737,107.188,36.944)
C6: (113.165,110.085,35.696)
C5: (113.151,110.883,36.764)
O3': (113.657,106.045,32.385)
C2: (109.767,110.891,37.907)
OP1: (108.807,105.915,31.704)
OP2: (109.923,105.389,33.965)
C4: (110.806,108.992,38.774)
O5': (109.043,107.677,33.462)
C3': (109.634,110.588,33.525)
C1': (108.692,110.845,35.679)
O4': (107.938,109.875,34.970)
C5': (108.102,108.612,32.907)
P: (108.894,106.117,33.176)
O2: (109.407,112.087,37.996)
C4': (108.249,109.965,33.559)
C2': (109.544,111.605,34.658)
O2': (108.848,112.779,34.287)
N1: (109.458,110.170,36.743)
N3: (110.445,110.271,38.905)
N4: (111.457,108.421,39.790)
C6: (109.851,108.864,36.617)
C5: (110.515,108.243,37.598)
O3': (109.833,111.209,32.265)
OP1: (108.807,105.915,31.704)
OP2: (109.923,105.389,33.965)
C4: (110.806,108.992,38.774)
O5': (109.043,107.677,33.462)
C3': (109.634,110.588,33.525)
C1': (108.692,110.845,35.679)
O4': (107.938,109.875,34.970)
C5': (108.102,108.612,32.907)
P: (108.894,106.117,33.176)
O2: (109.407,112.087,37.996)
C4': (108.249,109.965,33.559)
C2': (109.544,111.605,34.658)
O2': (108.848,112.779,34.287)
N1: (109.458,110.170,36.743)
N3: (110.445,110.271,38.905)
N4: (111.457,108.421,39.790)
C6: (109.851,108.864,36.617)
C5: (110.515,108.243,37.598)
O3': (109.833,111.209,32.265)
Image (generated by PyMOL):