Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OH5:A1307:A1321
Extra
PDB:
ATOM 1 O3' U A1306 40.822 -36.205 -49.420 1.00 45.17 O
ATOM 2 P G A1307 41.639 -35.618 -50.665 1.00 47.14 P
ATOM 3 OP1 G A1307 41.572 -36.628 -51.750 1.00 36.50 O
ATOM 4 OP2 G A1307 42.969 -35.202 -50.149 1.00 62.89 O
ATOM 5 O5' G A1307 40.797 -34.327 -51.052 1.00 44.48 O
ATOM 6 C5' G A1307 39.820 -34.362 -52.069 1.00 37.98 C
ATOM 7 C4' G A1307 38.980 -33.115 -52.042 1.00 40.46 C
ATOM 8 O4' G A1307 38.882 -32.633 -50.687 1.00 39.52 O
ATOM 9 C3' G A1307 39.523 -31.924 -52.814 1.00 48.06 C
ATOM 10 O3' G A1307 39.228 -31.990 -54.198 1.00 49.95 O
ATOM 11 C2' G A1307 38.876 -30.734 -52.110 1.00 44.19 C
ATOM 12 O2' G A1307 37.559 -30.528 -52.582 1.00 51.64 O
ATOM 13 C1' G A1307 38.793 -31.227 -50.670 1.00 39.40 C
ATOM 14 N9 G A1307 39.889 -30.706 -49.848 1.00 46.00 N
ATOM 15 C8 G A1307 40.989 -31.419 -49.450 1.00 48.72 C
ATOM 16 N7 G A1307 41.801 -30.709 -48.730 1.00 49.38 N
ATOM 17 C5 G A1307 41.215 -29.459 -48.651 1.00 43.87 C
ATOM 18 C6 G A1307 41.650 -28.273 -47.995 1.00 50.66 C
ATOM 19 O6 G A1307 42.657 -28.038 -47.310 1.00 49.61 O
ATOM 20 N1 G A1307 40.747 -27.246 -48.175 1.00 56.92 N
ATOM 21 C2 G A1307 39.589 -27.336 -48.876 1.00 50.68 C
ATOM 22 N2 G A1307 38.905 -26.196 -48.883 1.00 55.63 N
ATOM 23 N3 G A1307 39.159 -28.429 -49.490 1.00 48.16 N
ATOM 24 C4 G A1307 40.021 -29.448 -49.331 1.00 44.98 C
ATOM 25 P A A1308 40.392 -31.805 -55.279 1.00 53.44 P
ATOM 26 OP1 A A1308 40.684 -33.137 -55.851 1.00 65.04 O
ATOM 27 OP2 A A1308 41.484 -31.049 -54.624 1.00 73.71 O
ATOM 28 O5' A A1308 39.699 -30.903 -56.351 1.00 64.58 O
TER
ATOM 1 O3' G B1320 43.147 -23.566 -47.574 1.00 53.03 O
ATOM 2 P U B1321 41.717 -23.754 -46.881 1.00 57.71 P
ATOM 3 OP1 U B1321 41.788 -23.099 -45.546 1.00 44.43 O
ATOM 4 OP2 U B1321 41.382 -25.199 -46.955 1.00 52.84 O
ATOM 5 O5' U B1321 40.758 -22.916 -47.836 1.00 84.15 O
ATOM 6 C5' U B1321 40.870 -21.498 -47.912 1.00 93.35 C
ATOM 7 C4' U B1321 39.827 -20.897 -48.827 1.00101.05 C
ATOM 8 O4' U B1321 40.123 -21.227 -50.215 1.00101.36 O
ATOM 9 C3' U B1321 38.401 -21.390 -48.642 1.00100.05 C
ATOM 10 O3' U B1321 37.749 -20.824 -47.506 1.00103.67 O
ATOM 11 C2' U B1321 37.765 -21.028 -49.985 1.00 87.73 C
ATOM 12 O2' U B1321 37.507 -19.638 -50.053 1.00 90.24 O
ATOM 13 C1' U B1321 38.913 -21.330 -50.949 1.00 92.54 C
ATOM 14 N1 U B1321 38.817 -22.699 -51.566 1.00 83.36 N
ATOM 15 C2 U B1321 37.889 -22.921 -52.579 1.00 77.65 C
ATOM 16 O2 U B1321 37.123 -22.056 -52.967 1.00 88.55 O
ATOM 17 N3 U B1321 37.871 -24.192 -53.120 1.00 65.98 N
ATOM 18 C4 U B1321 38.675 -25.266 -52.783 1.00 68.89 C
ATOM 19 O4 U B1321 38.550 -26.355 -53.346 1.00 62.23 O
ATOM 20 C5 U B1321 39.618 -24.968 -51.752 1.00 70.17 C
ATOM 21 C6 U B1321 39.656 -23.737 -51.207 1.00 81.00 C
ATOM 22 P A B1322 36.847 -21.752 -46.535 1.00 76.12 P
ATOM 23 OP1 A B1322 36.434 -20.915 -45.392 1.00 88.19 O
ATOM 24 OP2 A B1322 37.610 -22.975 -46.264 1.00 87.69 O
ATOM 25 O5' A B1322 35.587 -22.088 -47.452 1.00 62.50 O
TER
ATOM 2 P G A1307 41.639 -35.618 -50.665 1.00 47.14 P
ATOM 3 OP1 G A1307 41.572 -36.628 -51.750 1.00 36.50 O
ATOM 4 OP2 G A1307 42.969 -35.202 -50.149 1.00 62.89 O
ATOM 5 O5' G A1307 40.797 -34.327 -51.052 1.00 44.48 O
ATOM 6 C5' G A1307 39.820 -34.362 -52.069 1.00 37.98 C
ATOM 7 C4' G A1307 38.980 -33.115 -52.042 1.00 40.46 C
ATOM 8 O4' G A1307 38.882 -32.633 -50.687 1.00 39.52 O
ATOM 9 C3' G A1307 39.523 -31.924 -52.814 1.00 48.06 C
ATOM 10 O3' G A1307 39.228 -31.990 -54.198 1.00 49.95 O
ATOM 11 C2' G A1307 38.876 -30.734 -52.110 1.00 44.19 C
ATOM 12 O2' G A1307 37.559 -30.528 -52.582 1.00 51.64 O
ATOM 13 C1' G A1307 38.793 -31.227 -50.670 1.00 39.40 C
ATOM 14 N9 G A1307 39.889 -30.706 -49.848 1.00 46.00 N
ATOM 15 C8 G A1307 40.989 -31.419 -49.450 1.00 48.72 C
ATOM 16 N7 G A1307 41.801 -30.709 -48.730 1.00 49.38 N
ATOM 17 C5 G A1307 41.215 -29.459 -48.651 1.00 43.87 C
ATOM 18 C6 G A1307 41.650 -28.273 -47.995 1.00 50.66 C
ATOM 19 O6 G A1307 42.657 -28.038 -47.310 1.00 49.61 O
ATOM 20 N1 G A1307 40.747 -27.246 -48.175 1.00 56.92 N
ATOM 21 C2 G A1307 39.589 -27.336 -48.876 1.00 50.68 C
ATOM 22 N2 G A1307 38.905 -26.196 -48.883 1.00 55.63 N
ATOM 23 N3 G A1307 39.159 -28.429 -49.490 1.00 48.16 N
ATOM 24 C4 G A1307 40.021 -29.448 -49.331 1.00 44.98 C
ATOM 25 P A A1308 40.392 -31.805 -55.279 1.00 53.44 P
ATOM 26 OP1 A A1308 40.684 -33.137 -55.851 1.00 65.04 O
ATOM 27 OP2 A A1308 41.484 -31.049 -54.624 1.00 73.71 O
ATOM 28 O5' A A1308 39.699 -30.903 -56.351 1.00 64.58 O
TER
ATOM 1 O3' G B1320 43.147 -23.566 -47.574 1.00 53.03 O
ATOM 2 P U B1321 41.717 -23.754 -46.881 1.00 57.71 P
ATOM 3 OP1 U B1321 41.788 -23.099 -45.546 1.00 44.43 O
ATOM 4 OP2 U B1321 41.382 -25.199 -46.955 1.00 52.84 O
ATOM 5 O5' U B1321 40.758 -22.916 -47.836 1.00 84.15 O
ATOM 6 C5' U B1321 40.870 -21.498 -47.912 1.00 93.35 C
ATOM 7 C4' U B1321 39.827 -20.897 -48.827 1.00101.05 C
ATOM 8 O4' U B1321 40.123 -21.227 -50.215 1.00101.36 O
ATOM 9 C3' U B1321 38.401 -21.390 -48.642 1.00100.05 C
ATOM 10 O3' U B1321 37.749 -20.824 -47.506 1.00103.67 O
ATOM 11 C2' U B1321 37.765 -21.028 -49.985 1.00 87.73 C
ATOM 12 O2' U B1321 37.507 -19.638 -50.053 1.00 90.24 O
ATOM 13 C1' U B1321 38.913 -21.330 -50.949 1.00 92.54 C
ATOM 14 N1 U B1321 38.817 -22.699 -51.566 1.00 83.36 N
ATOM 15 C2 U B1321 37.889 -22.921 -52.579 1.00 77.65 C
ATOM 16 O2 U B1321 37.123 -22.056 -52.967 1.00 88.55 O
ATOM 17 N3 U B1321 37.871 -24.192 -53.120 1.00 65.98 N
ATOM 18 C4 U B1321 38.675 -25.266 -52.783 1.00 68.89 C
ATOM 19 O4 U B1321 38.550 -26.355 -53.346 1.00 62.23 O
ATOM 20 C5 U B1321 39.618 -24.968 -51.752 1.00 70.17 C
ATOM 21 C6 U B1321 39.656 -23.737 -51.207 1.00 81.00 C
ATOM 22 P A B1322 36.847 -21.752 -46.535 1.00 76.12 P
ATOM 23 OP1 A B1322 36.434 -20.915 -45.392 1.00 88.19 O
ATOM 24 OP2 A B1322 37.610 -22.975 -46.264 1.00 87.69 O
ATOM 25 O5' A B1322 35.587 -22.088 -47.452 1.00 62.50 O
TER
Atoms:
OP1: (41.572,-36.628,-51.750)
OP2: (42.969,-35.202,-50.149)
C3': (39.523,-31.924,-52.814)
C1': (38.793,-31.227,-50.670)
C5': (39.820,-34.362,-52.069)
O6: (42.657,-28.038,-47.310)
O4': (38.882,-32.633,-50.687)
C8: (40.989,-31.419,-49.450)
C2: (39.589,-27.336,-48.876)
C6: (41.650,-28.273,-47.995)
C5: (41.215,-29.459,-48.651)
C4: (40.021,-29.448,-49.331)
P: (41.639,-35.618,-50.665)
C4': (38.980,-33.115,-52.042)
C2': (38.876,-30.734,-52.110)
O2': (37.559,-30.528,-52.582)
N1: (40.747,-27.246,-48.175)
N2: (38.905,-26.196,-48.883)
N3: (39.159,-28.429,-49.490)
N7: (41.801,-30.709,-48.730)
N9: (39.889,-30.706,-49.848)
O5': (40.797,-34.327,-51.052)
O3': (39.228,-31.990,-54.198)
OP2: (42.969,-35.202,-50.149)
C3': (39.523,-31.924,-52.814)
C1': (38.793,-31.227,-50.670)
C5': (39.820,-34.362,-52.069)
O6: (42.657,-28.038,-47.310)
O4': (38.882,-32.633,-50.687)
C8: (40.989,-31.419,-49.450)
C2: (39.589,-27.336,-48.876)
C6: (41.650,-28.273,-47.995)
C5: (41.215,-29.459,-48.651)
C4: (40.021,-29.448,-49.331)
P: (41.639,-35.618,-50.665)
C4': (38.980,-33.115,-52.042)
C2': (38.876,-30.734,-52.110)
O2': (37.559,-30.528,-52.582)
N1: (40.747,-27.246,-48.175)
N2: (38.905,-26.196,-48.883)
N3: (39.159,-28.429,-49.490)
N7: (41.801,-30.709,-48.730)
N9: (39.889,-30.706,-49.848)
O5': (40.797,-34.327,-51.052)
O3': (39.228,-31.990,-54.198)
C4: (38.675,-25.266,-52.783)
N3: (37.871,-24.192,-53.120)
OP1: (41.788,-23.099,-45.546)
OP2: (41.382,-25.199,-46.955)
C2: (37.889,-22.921,-52.579)
C1': (38.913,-21.330,-50.949)
C3': (38.401,-21.390,-48.642)
O5': (40.758,-22.916,-47.836)
O4': (40.123,-21.227,-50.215)
C5': (40.870,-21.498,-47.912)
P: (41.717,-23.754,-46.881)
C4': (39.827,-20.897,-48.827)
C2': (37.765,-21.028,-49.985)
O2': (37.507,-19.638,-50.053)
N1: (38.817,-22.699,-51.566)
O4: (38.550,-26.355,-53.346)
O2: (37.123,-22.056,-52.967)
C6: (39.656,-23.737,-51.207)
C5: (39.618,-24.968,-51.752)
O3': (37.749,-20.824,-47.506)
N3: (37.871,-24.192,-53.120)
OP1: (41.788,-23.099,-45.546)
OP2: (41.382,-25.199,-46.955)
C2: (37.889,-22.921,-52.579)
C1': (38.913,-21.330,-50.949)
C3': (38.401,-21.390,-48.642)
O5': (40.758,-22.916,-47.836)
O4': (40.123,-21.227,-50.215)
C5': (40.870,-21.498,-47.912)
P: (41.717,-23.754,-46.881)
C4': (39.827,-20.897,-48.827)
C2': (37.765,-21.028,-49.985)
O2': (37.507,-19.638,-50.053)
N1: (38.817,-22.699,-51.566)
O4: (38.550,-26.355,-53.346)
O2: (37.123,-22.056,-52.967)
C6: (39.656,-23.737,-51.207)
C5: (39.618,-24.968,-51.752)
O3': (37.749,-20.824,-47.506)
Image (generated by PyMOL):