ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1XMQ:A1344:A1319

Extra

PDB:
ATOM 1 O3' U A1343 239.032 145.983 -10.500 1.00 59.67 O
ATOM 2 P G A1344 238.034 146.663 -11.555 1.00 58.76 P
ATOM 3 OP1 G A1344 238.823 147.122 -12.729 1.00 89.28 O
ATOM 4 OP2 G A1344 237.171 147.628 -10.831 1.00 89.28 O
ATOM 5 O5' G A1344 237.107 145.466 -12.047 1.00 58.76 O
ATOM 6 C5' G A1344 237.625 144.420 -12.893 1.00 58.76 C
ATOM 7 C4' G A1344 236.570 143.366 -13.138 1.00 58.76 C
ATOM 8 O4' G A1344 236.222 142.712 -11.887 1.00 58.76 O
ATOM 9 C3' G A1344 235.249 143.884 -13.681 1.00 58.76 C
ATOM 10 O3' G A1344 235.253 144.051 -15.085 1.00 58.76 O
ATOM 11 C2' G A1344 234.275 142.803 -13.258 1.00 58.76 C
ATOM 12 O2' G A1344 234.257 141.725 -14.168 1.00 58.76 O
ATOM 13 C1' G A1344 234.841 142.384 -11.896 1.00 58.76 C
ATOM 14 N9 G A1344 234.171 143.141 -10.841 1.00 89.28 N
ATOM 15 C8 G A1344 234.521 144.377 -10.359 1.00 89.28 C
ATOM 16 N7 G A1344 233.695 144.830 -9.457 1.00 89.28 N
ATOM 17 C5 G A1344 232.747 143.830 -9.326 1.00 89.28 C
ATOM 18 C6 G A1344 231.609 143.757 -8.499 1.00 89.28 C
ATOM 19 O6 G A1344 231.169 144.602 -7.712 1.00 89.28 O
ATOM 20 N1 G A1344 230.943 142.554 -8.662 1.00 89.28 N
ATOM 21 C2 G A1344 231.308 141.557 -9.524 1.00 89.28 C
ATOM 22 N2 G A1344 230.529 140.472 -9.531 1.00 89.28 N
ATOM 23 N3 G A1344 232.358 141.618 -10.317 1.00 89.28 N
ATOM 24 C4 G A1344 233.033 142.774 -10.163 1.00 89.28 C
ATOM 25 P A A1345 233.992 144.745 -15.799 1.00 57.59 P
ATOM 26 OP1 A A1345 234.364 145.120 -17.197 1.00 87.47 O
ATOM 27 OP2 A A1345 233.469 145.786 -14.878 1.00 87.47 O
ATOM 28 O5' A A1345 232.916 143.574 -15.846 1.00 57.59 O
TER

ATOM 1 O3' G B1318 226.587 142.947 -6.792 1.00 63.64 O
ATOM 2 P U B1319 227.491 141.605 -6.526 1.00 51.26 P
ATOM 3 OP1 U B1319 227.132 141.114 -5.165 1.00 82.81 O
ATOM 4 OP2 U B1319 228.924 141.742 -6.869 1.00 82.81 O
ATOM 5 O5' U B1319 226.852 140.565 -7.544 1.00 51.26 O
ATOM 6 C5' U B1319 225.466 140.181 -7.391 1.00 51.26 C
ATOM 7 C4' U B1319 225.019 139.287 -8.521 1.00 51.26 C
ATOM 8 O4' U B1319 224.939 140.034 -9.758 1.00 51.26 O
ATOM 9 C3' U B1319 225.903 138.088 -8.814 1.00 51.26 C
ATOM 10 O3' U B1319 225.499 137.004 -7.997 1.00 51.26 O
ATOM 11 C2' U B1319 225.571 137.788 -10.264 1.00 51.26 C
ATOM 12 O2' U B1319 224.382 137.025 -10.318 1.00 51.26 O
ATOM 13 C1' U B1319 225.284 139.186 -10.832 1.00 51.26 C
ATOM 14 N1 U B1319 226.379 139.821 -11.579 1.00 82.81 N
ATOM 15 C2 U B1319 226.729 139.298 -12.802 1.00 82.81 C
ATOM 16 O2 U B1319 226.221 138.297 -13.265 1.00 82.81 O
ATOM 17 N3 U B1319 227.705 139.993 -13.468 1.00 82.81 N
ATOM 18 C4 U B1319 228.356 141.127 -13.037 1.00 82.81 C
ATOM 19 O4 U B1319 229.099 141.731 -13.808 1.00 82.81 O
ATOM 20 C5 U B1319 227.966 141.573 -11.749 1.00 82.81 C
ATOM 21 C6 U B1319 227.016 140.923 -11.081 1.00 82.81 C
ATOM 22 P A B1320 226.593 135.987 -7.432 1.00 55.73 P
ATOM 23 OP1 A B1320 225.933 134.913 -6.647 1.00 76.87 O
ATOM 24 OP2 A B1320 227.648 136.810 -6.791 1.00 76.87 O
ATOM 25 O5' A B1320 227.197 135.343 -8.758 1.00 55.73 O
TER

Atoms:
OP1: (238.823,147.122,-12.729)
OP2: (237.171,147.628,-10.831)
C3': (235.249,143.884,-13.681)
C1': (234.841,142.384,-11.896)
C5': (237.625,144.420,-12.893)
O6: (231.169,144.602,-7.712)
O4': (236.222,142.712,-11.887)
C8: (234.521,144.377,-10.359)
C2: (231.308,141.557,-9.524)
C6: (231.609,143.757,-8.499)
C5: (232.747,143.830,-9.326)
C4: (233.033,142.774,-10.163)
P: (238.034,146.663,-11.555)
C4': (236.570,143.366,-13.138)
C2': (234.275,142.803,-13.258)
O2': (234.257,141.725,-14.168)
N1: (230.943,142.554,-8.662)
N2: (230.529,140.472,-9.531)
N3: (232.358,141.618,-10.317)
N7: (233.695,144.830,-9.457)
N9: (234.171,143.141,-10.841)
O5': (237.107,145.466,-12.047)
O3': (235.253,144.051,-15.085)
C4: (228.356,141.127,-13.037)
N3: (227.705,139.993,-13.468)
OP1: (227.132,141.114,-5.165)
OP2: (228.924,141.742,-6.869)
C2: (226.729,139.298,-12.802)
C1': (225.284,139.186,-10.832)
C3': (225.903,138.088,-8.814)
O5': (226.852,140.565,-7.544)
O4': (224.939,140.034,-9.758)
C5': (225.466,140.181,-7.391)
P: (227.491,141.605,-6.526)
C4': (225.019,139.287,-8.521)
C2': (225.571,137.788,-10.264)
O2': (224.382,137.025,-10.318)
N1: (226.379,139.821,-11.579)
O4: (229.099,141.731,-13.808)
O2: (226.221,138.297,-13.265)
C6: (227.016,140.923,-11.081)
C5: (227.966,141.573,-11.749)
O3': (225.499,137.004,-7.997)
Image (generated by PyMOL):
PyMOL image
show in jmol