Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J03:A1928:A1216
Extra
PDB:
ATOM 1 O3' U A1927 -45.754 -82.895 7.681 1.00 15.69 O
ATOM 2 P G A1928 -47.170 -83.551 8.024 1.00 28.14 P
ATOM 3 OP1 G A1928 -47.294 -83.852 9.474 1.00 36.93 O
ATOM 4 OP2 G A1928 -47.342 -84.635 7.027 1.00 36.93 O
ATOM 5 O5' G A1928 -48.190 -82.379 7.699 1.00 0.79 O
ATOM 6 C5' G A1928 -48.099 -81.120 8.395 1.00 0.79 C
ATOM 7 C4' G A1928 -49.177 -80.184 7.920 1.00 0.79 C
ATOM 8 O4' G A1928 -48.929 -79.819 6.543 1.00 0.79 O
ATOM 9 C3' G A1928 -50.574 -80.765 7.941 1.00 0.79 C
ATOM 10 O3' G A1928 -51.142 -80.589 9.234 1.00 0.79 O
ATOM 11 C2' G A1928 -51.281 -79.967 6.857 1.00 0.79 C
ATOM 12 O2' G A1928 -51.731 -78.720 7.339 1.00 0.79 O
ATOM 13 C1' G A1928 -50.156 -79.733 5.847 1.00 0.79 C
ATOM 14 N9 G A1928 -50.134 -80.739 4.797 1.00 5.65 N
ATOM 15 C8 G A1928 -49.317 -81.831 4.750 1.00 5.79 C
ATOM 16 N7 G A1928 -49.540 -82.588 3.718 1.00 5.86 N
ATOM 17 C5 G A1928 -50.569 -81.958 3.046 1.00 6.01 C
ATOM 18 C6 G A1928 -51.237 -82.333 1.885 1.00 6.06 C
ATOM 19 O6 G A1928 -51.072 -83.336 1.204 1.00 5.98 O
ATOM 20 N1 G A1928 -52.201 -81.411 1.529 1.00 6.00 N
ATOM 21 C2 G A1928 -52.485 -80.276 2.214 1.00 5.98 C
ATOM 22 N2 G A1928 -53.459 -79.520 1.696 1.00 5.88 N
ATOM 23 N3 G A1928 -51.868 -79.914 3.321 1.00 6.07 N
ATOM 24 C4 G A1928 -50.929 -80.802 3.680 1.00 5.93 C
ATOM 25 P A A1929 -52.684 -80.962 9.487 1.00 16.98 P
ATOM 26 OP1 A A1929 -52.948 -80.928 10.948 1.00 45.62 O
ATOM 27 OP2 A A1929 -53.015 -82.192 8.714 1.00 45.62 O
ATOM 28 O5' A A1929 -53.452 -79.748 8.809 1.00 0.79 O
TER
ATOM 1 O3' G B1215 -54.774 -82.969 -0.908 1.00 0.79 O
ATOM 2 P U B1216 -53.882 -82.117 -1.956 1.00 9.57 P
ATOM 3 OP1 U B1216 -53.739 -82.909 -3.214 1.00 16.02 O
ATOM 4 OP2 U B1216 -52.665 -81.555 -1.314 1.00 15.82 O
ATOM 5 O5' U B1216 -54.847 -80.905 -2.283 1.00 22.64 O
ATOM 6 C5' U B1216 -56.129 -81.132 -2.889 1.00 22.64 C
ATOM 7 C4' U B1216 -57.153 -80.223 -2.268 1.00 22.64 C
ATOM 8 O4' U B1216 -57.590 -80.767 -1.001 1.00 22.64 O
ATOM 9 C3' U B1216 -56.659 -78.822 -1.952 1.00 22.64 C
ATOM 10 O3' U B1216 -56.736 -77.987 -3.104 1.00 22.64 O
ATOM 11 C2' U B1216 -57.605 -78.395 -0.838 1.00 22.64 C
ATOM 12 O2' U B1216 -58.851 -77.950 -1.342 1.00 22.64 O
ATOM 13 C1' U B1216 -57.844 -79.715 -0.097 1.00 22.64 C
ATOM 14 N1 U B1216 -57.032 -79.938 1.110 1.00 16.88 N
ATOM 15 C2 U B1216 -56.953 -78.932 2.060 1.00 16.88 C
ATOM 16 O2 U B1216 -57.455 -77.845 1.915 1.00 16.88 O
ATOM 17 N3 U B1216 -56.248 -79.249 3.188 1.00 16.88 N
ATOM 18 C4 U B1216 -55.609 -80.427 3.451 1.00 16.88 C
ATOM 19 O4 U B1216 -55.065 -80.583 4.534 1.00 16.88 O
ATOM 20 C5 U B1216 -55.696 -81.395 2.414 1.00 16.88 C
ATOM 21 C6 U B1216 -56.387 -81.125 1.308 1.00 16.88 C
ATOM 22 P A B1217 -55.533 -76.974 -3.440 1.00 21.48 P
ATOM 23 OP1 A B1217 -55.897 -76.375 -4.755 1.00 43.70 O
ATOM 24 OP2 A B1217 -54.218 -77.636 -3.286 1.00 43.70 O
ATOM 25 O5' A B1217 -55.626 -75.868 -2.289 1.00 22.47 O
TER
ATOM 2 P G A1928 -47.170 -83.551 8.024 1.00 28.14 P
ATOM 3 OP1 G A1928 -47.294 -83.852 9.474 1.00 36.93 O
ATOM 4 OP2 G A1928 -47.342 -84.635 7.027 1.00 36.93 O
ATOM 5 O5' G A1928 -48.190 -82.379 7.699 1.00 0.79 O
ATOM 6 C5' G A1928 -48.099 -81.120 8.395 1.00 0.79 C
ATOM 7 C4' G A1928 -49.177 -80.184 7.920 1.00 0.79 C
ATOM 8 O4' G A1928 -48.929 -79.819 6.543 1.00 0.79 O
ATOM 9 C3' G A1928 -50.574 -80.765 7.941 1.00 0.79 C
ATOM 10 O3' G A1928 -51.142 -80.589 9.234 1.00 0.79 O
ATOM 11 C2' G A1928 -51.281 -79.967 6.857 1.00 0.79 C
ATOM 12 O2' G A1928 -51.731 -78.720 7.339 1.00 0.79 O
ATOM 13 C1' G A1928 -50.156 -79.733 5.847 1.00 0.79 C
ATOM 14 N9 G A1928 -50.134 -80.739 4.797 1.00 5.65 N
ATOM 15 C8 G A1928 -49.317 -81.831 4.750 1.00 5.79 C
ATOM 16 N7 G A1928 -49.540 -82.588 3.718 1.00 5.86 N
ATOM 17 C5 G A1928 -50.569 -81.958 3.046 1.00 6.01 C
ATOM 18 C6 G A1928 -51.237 -82.333 1.885 1.00 6.06 C
ATOM 19 O6 G A1928 -51.072 -83.336 1.204 1.00 5.98 O
ATOM 20 N1 G A1928 -52.201 -81.411 1.529 1.00 6.00 N
ATOM 21 C2 G A1928 -52.485 -80.276 2.214 1.00 5.98 C
ATOM 22 N2 G A1928 -53.459 -79.520 1.696 1.00 5.88 N
ATOM 23 N3 G A1928 -51.868 -79.914 3.321 1.00 6.07 N
ATOM 24 C4 G A1928 -50.929 -80.802 3.680 1.00 5.93 C
ATOM 25 P A A1929 -52.684 -80.962 9.487 1.00 16.98 P
ATOM 26 OP1 A A1929 -52.948 -80.928 10.948 1.00 45.62 O
ATOM 27 OP2 A A1929 -53.015 -82.192 8.714 1.00 45.62 O
ATOM 28 O5' A A1929 -53.452 -79.748 8.809 1.00 0.79 O
TER
ATOM 1 O3' G B1215 -54.774 -82.969 -0.908 1.00 0.79 O
ATOM 2 P U B1216 -53.882 -82.117 -1.956 1.00 9.57 P
ATOM 3 OP1 U B1216 -53.739 -82.909 -3.214 1.00 16.02 O
ATOM 4 OP2 U B1216 -52.665 -81.555 -1.314 1.00 15.82 O
ATOM 5 O5' U B1216 -54.847 -80.905 -2.283 1.00 22.64 O
ATOM 6 C5' U B1216 -56.129 -81.132 -2.889 1.00 22.64 C
ATOM 7 C4' U B1216 -57.153 -80.223 -2.268 1.00 22.64 C
ATOM 8 O4' U B1216 -57.590 -80.767 -1.001 1.00 22.64 O
ATOM 9 C3' U B1216 -56.659 -78.822 -1.952 1.00 22.64 C
ATOM 10 O3' U B1216 -56.736 -77.987 -3.104 1.00 22.64 O
ATOM 11 C2' U B1216 -57.605 -78.395 -0.838 1.00 22.64 C
ATOM 12 O2' U B1216 -58.851 -77.950 -1.342 1.00 22.64 O
ATOM 13 C1' U B1216 -57.844 -79.715 -0.097 1.00 22.64 C
ATOM 14 N1 U B1216 -57.032 -79.938 1.110 1.00 16.88 N
ATOM 15 C2 U B1216 -56.953 -78.932 2.060 1.00 16.88 C
ATOM 16 O2 U B1216 -57.455 -77.845 1.915 1.00 16.88 O
ATOM 17 N3 U B1216 -56.248 -79.249 3.188 1.00 16.88 N
ATOM 18 C4 U B1216 -55.609 -80.427 3.451 1.00 16.88 C
ATOM 19 O4 U B1216 -55.065 -80.583 4.534 1.00 16.88 O
ATOM 20 C5 U B1216 -55.696 -81.395 2.414 1.00 16.88 C
ATOM 21 C6 U B1216 -56.387 -81.125 1.308 1.00 16.88 C
ATOM 22 P A B1217 -55.533 -76.974 -3.440 1.00 21.48 P
ATOM 23 OP1 A B1217 -55.897 -76.375 -4.755 1.00 43.70 O
ATOM 24 OP2 A B1217 -54.218 -77.636 -3.286 1.00 43.70 O
ATOM 25 O5' A B1217 -55.626 -75.868 -2.289 1.00 22.47 O
TER
Atoms:
OP1: (-47.294,-83.852,9.474)
OP2: (-47.342,-84.635,7.027)
C3': (-50.574,-80.765,7.941)
C1': (-50.156,-79.733,5.847)
C5': (-48.099,-81.120,8.395)
O6: (-51.072,-83.336,1.204)
O4': (-48.929,-79.819,6.543)
C8: (-49.317,-81.831,4.750)
C2: (-52.485,-80.276,2.214)
C6: (-51.237,-82.333,1.885)
C5: (-50.569,-81.958,3.046)
C4: (-50.929,-80.802,3.680)
P: (-47.170,-83.551,8.024)
C4': (-49.177,-80.184,7.920)
C2': (-51.281,-79.967,6.857)
O2': (-51.731,-78.720,7.339)
N1: (-52.201,-81.411,1.529)
N2: (-53.459,-79.520,1.696)
N3: (-51.868,-79.914,3.321)
N7: (-49.540,-82.588,3.718)
N9: (-50.134,-80.739,4.797)
O5': (-48.190,-82.379,7.699)
O3': (-51.142,-80.589,9.234)
OP2: (-47.342,-84.635,7.027)
C3': (-50.574,-80.765,7.941)
C1': (-50.156,-79.733,5.847)
C5': (-48.099,-81.120,8.395)
O6: (-51.072,-83.336,1.204)
O4': (-48.929,-79.819,6.543)
C8: (-49.317,-81.831,4.750)
C2: (-52.485,-80.276,2.214)
C6: (-51.237,-82.333,1.885)
C5: (-50.569,-81.958,3.046)
C4: (-50.929,-80.802,3.680)
P: (-47.170,-83.551,8.024)
C4': (-49.177,-80.184,7.920)
C2': (-51.281,-79.967,6.857)
O2': (-51.731,-78.720,7.339)
N1: (-52.201,-81.411,1.529)
N2: (-53.459,-79.520,1.696)
N3: (-51.868,-79.914,3.321)
N7: (-49.540,-82.588,3.718)
N9: (-50.134,-80.739,4.797)
O5': (-48.190,-82.379,7.699)
O3': (-51.142,-80.589,9.234)
C4: (-55.609,-80.427,3.451)
N3: (-56.248,-79.249,3.188)
OP1: (-53.739,-82.909,-3.214)
OP2: (-52.665,-81.555,-1.314)
C2: (-56.953,-78.932,2.060)
C1': (-57.844,-79.715,-0.097)
C3': (-56.659,-78.822,-1.952)
O5': (-54.847,-80.905,-2.283)
O4': (-57.590,-80.767,-1.001)
C5': (-56.129,-81.132,-2.889)
P: (-53.882,-82.117,-1.956)
C4': (-57.153,-80.223,-2.268)
C2': (-57.605,-78.395,-0.838)
O2': (-58.851,-77.950,-1.342)
N1: (-57.032,-79.938,1.110)
O4: (-55.065,-80.583,4.534)
O2: (-57.455,-77.845,1.915)
C6: (-56.387,-81.125,1.308)
C5: (-55.696,-81.395,2.414)
O3': (-56.736,-77.987,-3.104)
N3: (-56.248,-79.249,3.188)
OP1: (-53.739,-82.909,-3.214)
OP2: (-52.665,-81.555,-1.314)
C2: (-56.953,-78.932,2.060)
C1': (-57.844,-79.715,-0.097)
C3': (-56.659,-78.822,-1.952)
O5': (-54.847,-80.905,-2.283)
O4': (-57.590,-80.767,-1.001)
C5': (-56.129,-81.132,-2.889)
P: (-53.882,-82.117,-1.956)
C4': (-57.153,-80.223,-2.268)
C2': (-57.605,-78.395,-0.838)
O2': (-58.851,-77.950,-1.342)
N1: (-57.032,-79.938,1.110)
O4: (-55.065,-80.583,4.534)
O2: (-57.455,-77.845,1.915)
C6: (-56.387,-81.125,1.308)
C5: (-55.696,-81.395,2.414)
O3': (-56.736,-77.987,-3.104)
Image (generated by PyMOL):