Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1NJI:A280:A347
Extra
PDB:
ATOM 1 O3' C A 279 55.299 128.872 -1.943 1.00 65.57 O
ATOM 2 P G A 280 54.665 129.683 -0.710 1.00 66.20 P
ATOM 3 OP1 G A 280 53.642 130.631 -1.228 1.00 66.30 O
ATOM 4 OP2 G A 280 55.797 130.203 0.095 1.00 67.89 O
ATOM 5 O5' G A 280 53.911 128.559 0.127 1.00 65.97 O
ATOM 6 C5' G A 280 52.745 127.898 -0.411 1.00 65.49 C
ATOM 7 C4' G A 280 52.379 126.708 0.444 1.00 65.04 C
ATOM 8 O4' G A 280 53.445 125.717 0.383 1.00 64.38 O
ATOM 9 C3' G A 280 52.250 126.998 1.931 1.00 65.43 C
ATOM 10 O3' G A 280 51.011 127.597 2.283 1.00 68.34 O
ATOM 11 C2' G A 280 52.468 125.622 2.538 1.00 63.54 C
ATOM 12 O2' G A 280 51.346 124.775 2.408 1.00 61.91 O
ATOM 13 C1' G A 280 53.602 125.107 1.655 1.00 62.46 C
ATOM 14 N9 G A 280 54.902 125.503 2.190 1.00 61.66 N
ATOM 15 C8 G A 280 55.562 126.698 1.995 1.00 61.04 C
ATOM 16 N7 G A 280 56.708 126.758 2.617 1.00 60.65 N
ATOM 17 C5 G A 280 56.815 125.530 3.256 1.00 60.80 C
ATOM 18 C6 G A 280 57.845 125.007 4.080 1.00 60.65 C
ATOM 19 O6 G A 280 58.914 125.537 4.407 1.00 61.12 O
ATOM 20 N1 G A 280 57.536 123.726 4.532 1.00 60.73 N
ATOM 21 C2 G A 280 56.388 123.035 4.226 1.00 60.55 C
ATOM 22 N2 G A 280 56.263 121.814 4.764 1.00 60.76 N
ATOM 23 N3 G A 280 55.430 123.505 3.450 1.00 60.19 N
ATOM 24 C4 G A 280 55.705 124.747 3.005 1.00 60.87 C
ATOM 25 P A A 281 50.882 128.375 3.684 1.00 70.84 P
ATOM 26 OP1 A A 281 49.624 129.171 3.643 1.00 70.99 O
ATOM 27 OP2 A A 281 52.178 129.058 3.950 1.00 70.91 O
ATOM 28 O5' A A 281 50.713 127.192 4.743 1.00 69.91 O
TER
ATOM 1 O3' G B 346 58.854 123.397 8.489 1.00 68.49 O
ATOM 2 P U B 347 59.675 122.282 7.659 1.00 69.84 P
ATOM 3 OP1 U B 347 61.031 122.127 8.265 1.00 69.88 O
ATOM 4 OP2 U B 347 59.547 122.602 6.213 1.00 70.00 O
ATOM 5 O5' U B 347 58.847 120.940 7.896 1.00 67.99 O
ATOM 6 C5' U B 347 58.998 120.172 9.107 1.00 65.83 C
ATOM 7 C4' U B 347 57.685 119.519 9.478 1.00 64.10 C
ATOM 8 O4' U B 347 56.727 120.547 9.836 1.00 63.19 O
ATOM 9 C3' U B 347 56.995 118.716 8.383 1.00 63.58 C
ATOM 10 O3' U B 347 57.531 117.390 8.310 1.00 65.09 O
ATOM 11 C2' U B 347 55.533 118.745 8.824 1.00 62.40 C
ATOM 12 O2' U B 347 55.210 117.794 9.820 1.00 60.90 O
ATOM 13 C1' U B 347 55.428 120.139 9.450 1.00 61.63 C
ATOM 14 N1 U B 347 54.827 121.187 8.608 1.00 60.38 N
ATOM 15 C2 U B 347 53.490 121.055 8.275 1.00 60.13 C
ATOM 16 O2 U B 347 52.819 120.083 8.586 1.00 60.71 O
ATOM 17 N3 U B 347 52.967 122.101 7.558 1.00 59.19 N
ATOM 18 C4 U B 347 53.621 123.235 7.137 1.00 59.02 C
ATOM 19 O4 U B 347 52.974 124.133 6.594 1.00 58.20 O
ATOM 20 C5 U B 347 55.010 123.283 7.478 1.00 59.18 C
ATOM 21 C6 U B 347 55.553 122.282 8.182 1.00 60.01 C
ATOM 22 P A B 348 57.532 116.588 6.908 1.00 66.02 P
ATOM 23 OP1 A B 348 58.118 115.255 7.227 1.00 65.20 O
ATOM 24 OP2 A B 348 58.143 117.415 5.837 1.00 64.58 O
ATOM 25 O5' A B 348 55.985 116.415 6.551 1.00 66.65 O
TER
ATOM 2 P G A 280 54.665 129.683 -0.710 1.00 66.20 P
ATOM 3 OP1 G A 280 53.642 130.631 -1.228 1.00 66.30 O
ATOM 4 OP2 G A 280 55.797 130.203 0.095 1.00 67.89 O
ATOM 5 O5' G A 280 53.911 128.559 0.127 1.00 65.97 O
ATOM 6 C5' G A 280 52.745 127.898 -0.411 1.00 65.49 C
ATOM 7 C4' G A 280 52.379 126.708 0.444 1.00 65.04 C
ATOM 8 O4' G A 280 53.445 125.717 0.383 1.00 64.38 O
ATOM 9 C3' G A 280 52.250 126.998 1.931 1.00 65.43 C
ATOM 10 O3' G A 280 51.011 127.597 2.283 1.00 68.34 O
ATOM 11 C2' G A 280 52.468 125.622 2.538 1.00 63.54 C
ATOM 12 O2' G A 280 51.346 124.775 2.408 1.00 61.91 O
ATOM 13 C1' G A 280 53.602 125.107 1.655 1.00 62.46 C
ATOM 14 N9 G A 280 54.902 125.503 2.190 1.00 61.66 N
ATOM 15 C8 G A 280 55.562 126.698 1.995 1.00 61.04 C
ATOM 16 N7 G A 280 56.708 126.758 2.617 1.00 60.65 N
ATOM 17 C5 G A 280 56.815 125.530 3.256 1.00 60.80 C
ATOM 18 C6 G A 280 57.845 125.007 4.080 1.00 60.65 C
ATOM 19 O6 G A 280 58.914 125.537 4.407 1.00 61.12 O
ATOM 20 N1 G A 280 57.536 123.726 4.532 1.00 60.73 N
ATOM 21 C2 G A 280 56.388 123.035 4.226 1.00 60.55 C
ATOM 22 N2 G A 280 56.263 121.814 4.764 1.00 60.76 N
ATOM 23 N3 G A 280 55.430 123.505 3.450 1.00 60.19 N
ATOM 24 C4 G A 280 55.705 124.747 3.005 1.00 60.87 C
ATOM 25 P A A 281 50.882 128.375 3.684 1.00 70.84 P
ATOM 26 OP1 A A 281 49.624 129.171 3.643 1.00 70.99 O
ATOM 27 OP2 A A 281 52.178 129.058 3.950 1.00 70.91 O
ATOM 28 O5' A A 281 50.713 127.192 4.743 1.00 69.91 O
TER
ATOM 1 O3' G B 346 58.854 123.397 8.489 1.00 68.49 O
ATOM 2 P U B 347 59.675 122.282 7.659 1.00 69.84 P
ATOM 3 OP1 U B 347 61.031 122.127 8.265 1.00 69.88 O
ATOM 4 OP2 U B 347 59.547 122.602 6.213 1.00 70.00 O
ATOM 5 O5' U B 347 58.847 120.940 7.896 1.00 67.99 O
ATOM 6 C5' U B 347 58.998 120.172 9.107 1.00 65.83 C
ATOM 7 C4' U B 347 57.685 119.519 9.478 1.00 64.10 C
ATOM 8 O4' U B 347 56.727 120.547 9.836 1.00 63.19 O
ATOM 9 C3' U B 347 56.995 118.716 8.383 1.00 63.58 C
ATOM 10 O3' U B 347 57.531 117.390 8.310 1.00 65.09 O
ATOM 11 C2' U B 347 55.533 118.745 8.824 1.00 62.40 C
ATOM 12 O2' U B 347 55.210 117.794 9.820 1.00 60.90 O
ATOM 13 C1' U B 347 55.428 120.139 9.450 1.00 61.63 C
ATOM 14 N1 U B 347 54.827 121.187 8.608 1.00 60.38 N
ATOM 15 C2 U B 347 53.490 121.055 8.275 1.00 60.13 C
ATOM 16 O2 U B 347 52.819 120.083 8.586 1.00 60.71 O
ATOM 17 N3 U B 347 52.967 122.101 7.558 1.00 59.19 N
ATOM 18 C4 U B 347 53.621 123.235 7.137 1.00 59.02 C
ATOM 19 O4 U B 347 52.974 124.133 6.594 1.00 58.20 O
ATOM 20 C5 U B 347 55.010 123.283 7.478 1.00 59.18 C
ATOM 21 C6 U B 347 55.553 122.282 8.182 1.00 60.01 C
ATOM 22 P A B 348 57.532 116.588 6.908 1.00 66.02 P
ATOM 23 OP1 A B 348 58.118 115.255 7.227 1.00 65.20 O
ATOM 24 OP2 A B 348 58.143 117.415 5.837 1.00 64.58 O
ATOM 25 O5' A B 348 55.985 116.415 6.551 1.00 66.65 O
TER
Atoms:
OP1: (53.642,130.631,-1.228)
OP2: (55.797,130.203,0.095)
C3': (52.250,126.998,1.931)
C1': (53.602,125.107,1.655)
C5': (52.745,127.898,-0.411)
O6: (58.914,125.537,4.407)
O4': (53.445,125.717,0.383)
C8: (55.562,126.698,1.995)
C2: (56.388,123.035,4.226)
C6: (57.845,125.007,4.080)
C5: (56.815,125.530,3.256)
C4: (55.705,124.747,3.005)
P: (54.665,129.683,-0.710)
C4': (52.379,126.708,0.444)
C2': (52.468,125.622,2.538)
O2': (51.346,124.775,2.408)
N1: (57.536,123.726,4.532)
N2: (56.263,121.814,4.764)
N3: (55.430,123.505,3.450)
N7: (56.708,126.758,2.617)
N9: (54.902,125.503,2.190)
O5': (53.911,128.559,0.127)
O3': (51.011,127.597,2.283)
OP2: (55.797,130.203,0.095)
C3': (52.250,126.998,1.931)
C1': (53.602,125.107,1.655)
C5': (52.745,127.898,-0.411)
O6: (58.914,125.537,4.407)
O4': (53.445,125.717,0.383)
C8: (55.562,126.698,1.995)
C2: (56.388,123.035,4.226)
C6: (57.845,125.007,4.080)
C5: (56.815,125.530,3.256)
C4: (55.705,124.747,3.005)
P: (54.665,129.683,-0.710)
C4': (52.379,126.708,0.444)
C2': (52.468,125.622,2.538)
O2': (51.346,124.775,2.408)
N1: (57.536,123.726,4.532)
N2: (56.263,121.814,4.764)
N3: (55.430,123.505,3.450)
N7: (56.708,126.758,2.617)
N9: (54.902,125.503,2.190)
O5': (53.911,128.559,0.127)
O3': (51.011,127.597,2.283)
C4: (53.621,123.235,7.137)
N3: (52.967,122.101,7.558)
OP1: (61.031,122.127,8.265)
OP2: (59.547,122.602,6.213)
C2: (53.490,121.055,8.275)
C1': (55.428,120.139,9.450)
C3': (56.995,118.716,8.383)
O5': (58.847,120.940,7.896)
O4': (56.727,120.547,9.836)
C5': (58.998,120.172,9.107)
P: (59.675,122.282,7.659)
C4': (57.685,119.519,9.478)
C2': (55.533,118.745,8.824)
O2': (55.210,117.794,9.820)
N1: (54.827,121.187,8.608)
O4: (52.974,124.133,6.594)
O2: (52.819,120.083,8.586)
C6: (55.553,122.282,8.182)
C5: (55.010,123.283,7.478)
O3': (57.531,117.390,8.310)
N3: (52.967,122.101,7.558)
OP1: (61.031,122.127,8.265)
OP2: (59.547,122.602,6.213)
C2: (53.490,121.055,8.275)
C1': (55.428,120.139,9.450)
C3': (56.995,118.716,8.383)
O5': (58.847,120.940,7.896)
O4': (56.727,120.547,9.836)
C5': (58.998,120.172,9.107)
P: (59.675,122.282,7.659)
C4': (57.685,119.519,9.478)
C2': (55.533,118.745,8.824)
O2': (55.210,117.794,9.820)
N1: (54.827,121.187,8.608)
O4: (52.974,124.133,6.594)
O2: (52.819,120.083,8.586)
C6: (55.553,122.282,8.182)
C5: (55.010,123.283,7.478)
O3': (57.531,117.390,8.310)
Image (generated by PyMOL):