Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2G:A58:A12
Extra
PDB:
ATOM 1 O3' A A 57 5.970 -27.038 23.256 1.00 42.95 O
ATOM 2 P U A 58 6.521 -25.921 22.204 1.00 47.46 P
ATOM 3 OP1 U A 58 7.025 -26.772 21.095 1.00 35.00 O
ATOM 4 OP2 U A 58 7.397 -24.949 22.884 1.00 44.78 O
ATOM 5 O5' U A 58 5.171 -25.050 21.883 1.00 38.87 O
ATOM 6 C5' U A 58 4.015 -25.600 21.178 1.00 36.31 C
ATOM 7 C4' U A 58 2.818 -24.791 21.623 1.00 37.72 C
ATOM 8 O4' U A 58 2.722 -24.724 23.060 1.00 34.32 O
ATOM 9 C3' U A 58 2.900 -23.282 21.277 1.00 35.70 C
ATOM 10 O3' U A 58 2.660 -23.072 19.928 1.00 42.52 O
ATOM 11 C2' U A 58 1.766 -22.764 22.100 1.00 32.67 C
ATOM 12 O2' U A 58 0.520 -22.875 21.453 1.00 33.78 O
ATOM 13 C1' U A 58 1.845 -23.656 23.364 1.00 38.67 C
ATOM 14 N1 U A 58 2.455 -22.834 24.410 1.00 36.47 N
ATOM 15 C2 U A 58 1.654 -22.143 25.280 1.00 37.95 C
ATOM 16 O2 U A 58 0.427 -22.123 25.288 1.00 39.81 O
ATOM 17 N3 U A 58 2.378 -21.408 26.161 1.00 39.46 N
ATOM 18 C4 U A 58 3.736 -21.339 26.274 1.00 37.82 C
ATOM 19 O4 U A 58 4.167 -20.617 27.148 1.00 39.83 O
ATOM 20 C5 U A 58 4.514 -22.120 25.340 1.00 40.06 C
ATOM 21 C6 U A 58 3.838 -22.799 24.436 1.00 37.96 C
ATOM 22 P G A 59 3.224 -21.824 19.071 1.00 41.50 P
ATOM 23 OP1 G A 59 2.883 -22.061 17.654 1.00 36.23 O
ATOM 24 OP2 G A 59 4.648 -21.611 19.436 1.00 39.86 O
ATOM 25 O5' G A 59 2.219 -20.700 19.635 1.00 39.29 O
TER
ATOM 1 O3' U B 11 -9.398 -24.001 21.849 1.00 40.90 O
ATOM 2 P G B 12 -9.200 -25.535 21.310 1.00 45.49 P
ATOM 3 OP1 G B 12 -9.873 -25.537 20.000 1.00 38.28 O
ATOM 4 OP2 G B 12 -9.636 -26.394 22.413 1.00 48.43 O
ATOM 5 O5' G B 12 -7.626 -25.759 21.129 1.00 38.53 O
ATOM 6 C5' G B 12 -6.986 -24.999 20.135 1.00 41.40 C
ATOM 7 C4' G B 12 -5.644 -24.437 20.572 1.00 39.91 C
ATOM 8 O4' G B 12 -5.748 -23.218 21.386 1.00 40.99 O
ATOM 9 C3' G B 12 -4.788 -25.344 21.420 1.00 38.07 C
ATOM 10 O3' G B 12 -4.143 -26.254 20.591 1.00 38.10 O
ATOM 11 C2' G B 12 -3.799 -24.325 22.005 1.00 41.51 C
ATOM 12 O2' G B 12 -2.909 -23.699 21.081 1.00 42.35 O
ATOM 13 C1' G B 12 -4.755 -23.232 22.404 1.00 36.93 C
ATOM 14 N9 G B 12 -5.396 -23.303 23.711 1.00 36.12 N
ATOM 15 C8 G B 12 -6.701 -23.695 24.010 1.00 36.51 C
ATOM 16 N7 G B 12 -6.977 -23.652 25.293 1.00 36.18 N
ATOM 17 C5 G B 12 -5.785 -23.222 25.882 1.00 34.27 C
ATOM 18 C6 G B 12 -5.468 -22.950 27.235 1.00 33.57 C
ATOM 19 O6 G B 12 -6.222 -23.034 28.186 1.00 34.03 O
ATOM 20 N1 G B 12 -4.172 -22.530 27.431 1.00 31.60 N
ATOM 21 C2 G B 12 -3.254 -22.353 26.424 1.00 37.78 C
ATOM 22 N2 G B 12 -2.020 -21.914 26.766 1.00 34.60 N
ATOM 23 N3 G B 12 -3.528 -22.620 25.143 1.00 35.93 N
ATOM 24 C4 G B 12 -4.811 -22.999 24.934 1.00 35.81 C
ATOM 25 P C B 13 -3.688 -27.646 21.261 1.00 38.68 P
ATOM 26 OP1 C B 13 -2.999 -28.492 20.255 1.00 38.22 O
ATOM 27 OP2 C B 13 -4.788 -28.128 22.118 1.00 36.51 O
ATOM 28 O5' C B 13 -2.534 -27.212 22.271 1.00 41.11 O
TER
ATOM 2 P U A 58 6.521 -25.921 22.204 1.00 47.46 P
ATOM 3 OP1 U A 58 7.025 -26.772 21.095 1.00 35.00 O
ATOM 4 OP2 U A 58 7.397 -24.949 22.884 1.00 44.78 O
ATOM 5 O5' U A 58 5.171 -25.050 21.883 1.00 38.87 O
ATOM 6 C5' U A 58 4.015 -25.600 21.178 1.00 36.31 C
ATOM 7 C4' U A 58 2.818 -24.791 21.623 1.00 37.72 C
ATOM 8 O4' U A 58 2.722 -24.724 23.060 1.00 34.32 O
ATOM 9 C3' U A 58 2.900 -23.282 21.277 1.00 35.70 C
ATOM 10 O3' U A 58 2.660 -23.072 19.928 1.00 42.52 O
ATOM 11 C2' U A 58 1.766 -22.764 22.100 1.00 32.67 C
ATOM 12 O2' U A 58 0.520 -22.875 21.453 1.00 33.78 O
ATOM 13 C1' U A 58 1.845 -23.656 23.364 1.00 38.67 C
ATOM 14 N1 U A 58 2.455 -22.834 24.410 1.00 36.47 N
ATOM 15 C2 U A 58 1.654 -22.143 25.280 1.00 37.95 C
ATOM 16 O2 U A 58 0.427 -22.123 25.288 1.00 39.81 O
ATOM 17 N3 U A 58 2.378 -21.408 26.161 1.00 39.46 N
ATOM 18 C4 U A 58 3.736 -21.339 26.274 1.00 37.82 C
ATOM 19 O4 U A 58 4.167 -20.617 27.148 1.00 39.83 O
ATOM 20 C5 U A 58 4.514 -22.120 25.340 1.00 40.06 C
ATOM 21 C6 U A 58 3.838 -22.799 24.436 1.00 37.96 C
ATOM 22 P G A 59 3.224 -21.824 19.071 1.00 41.50 P
ATOM 23 OP1 G A 59 2.883 -22.061 17.654 1.00 36.23 O
ATOM 24 OP2 G A 59 4.648 -21.611 19.436 1.00 39.86 O
ATOM 25 O5' G A 59 2.219 -20.700 19.635 1.00 39.29 O
TER
ATOM 1 O3' U B 11 -9.398 -24.001 21.849 1.00 40.90 O
ATOM 2 P G B 12 -9.200 -25.535 21.310 1.00 45.49 P
ATOM 3 OP1 G B 12 -9.873 -25.537 20.000 1.00 38.28 O
ATOM 4 OP2 G B 12 -9.636 -26.394 22.413 1.00 48.43 O
ATOM 5 O5' G B 12 -7.626 -25.759 21.129 1.00 38.53 O
ATOM 6 C5' G B 12 -6.986 -24.999 20.135 1.00 41.40 C
ATOM 7 C4' G B 12 -5.644 -24.437 20.572 1.00 39.91 C
ATOM 8 O4' G B 12 -5.748 -23.218 21.386 1.00 40.99 O
ATOM 9 C3' G B 12 -4.788 -25.344 21.420 1.00 38.07 C
ATOM 10 O3' G B 12 -4.143 -26.254 20.591 1.00 38.10 O
ATOM 11 C2' G B 12 -3.799 -24.325 22.005 1.00 41.51 C
ATOM 12 O2' G B 12 -2.909 -23.699 21.081 1.00 42.35 O
ATOM 13 C1' G B 12 -4.755 -23.232 22.404 1.00 36.93 C
ATOM 14 N9 G B 12 -5.396 -23.303 23.711 1.00 36.12 N
ATOM 15 C8 G B 12 -6.701 -23.695 24.010 1.00 36.51 C
ATOM 16 N7 G B 12 -6.977 -23.652 25.293 1.00 36.18 N
ATOM 17 C5 G B 12 -5.785 -23.222 25.882 1.00 34.27 C
ATOM 18 C6 G B 12 -5.468 -22.950 27.235 1.00 33.57 C
ATOM 19 O6 G B 12 -6.222 -23.034 28.186 1.00 34.03 O
ATOM 20 N1 G B 12 -4.172 -22.530 27.431 1.00 31.60 N
ATOM 21 C2 G B 12 -3.254 -22.353 26.424 1.00 37.78 C
ATOM 22 N2 G B 12 -2.020 -21.914 26.766 1.00 34.60 N
ATOM 23 N3 G B 12 -3.528 -22.620 25.143 1.00 35.93 N
ATOM 24 C4 G B 12 -4.811 -22.999 24.934 1.00 35.81 C
ATOM 25 P C B 13 -3.688 -27.646 21.261 1.00 38.68 P
ATOM 26 OP1 C B 13 -2.999 -28.492 20.255 1.00 38.22 O
ATOM 27 OP2 C B 13 -4.788 -28.128 22.118 1.00 36.51 O
ATOM 28 O5' C B 13 -2.534 -27.212 22.271 1.00 41.11 O
TER
Atoms:
C4: (3.736,-21.339,26.274)
N3: (2.378,-21.408,26.161)
OP1: (7.025,-26.772,21.095)
OP2: (7.397,-24.949,22.884)
C2: (1.654,-22.143,25.280)
C1': (1.845,-23.656,23.364)
C3': (2.900,-23.282,21.277)
O5': (5.171,-25.050,21.883)
O4': (2.722,-24.724,23.060)
C5': (4.015,-25.600,21.178)
P: (6.521,-25.921,22.204)
C4': (2.818,-24.791,21.623)
C2': (1.766,-22.764,22.100)
O2': (0.520,-22.875,21.453)
N1: (2.455,-22.834,24.410)
O4: (4.167,-20.617,27.148)
O2: (0.427,-22.123,25.288)
C6: (3.838,-22.799,24.436)
C5: (4.514,-22.120,25.340)
O3': (2.660,-23.072,19.928)
N3: (2.378,-21.408,26.161)
OP1: (7.025,-26.772,21.095)
OP2: (7.397,-24.949,22.884)
C2: (1.654,-22.143,25.280)
C1': (1.845,-23.656,23.364)
C3': (2.900,-23.282,21.277)
O5': (5.171,-25.050,21.883)
O4': (2.722,-24.724,23.060)
C5': (4.015,-25.600,21.178)
P: (6.521,-25.921,22.204)
C4': (2.818,-24.791,21.623)
C2': (1.766,-22.764,22.100)
O2': (0.520,-22.875,21.453)
N1: (2.455,-22.834,24.410)
O4: (4.167,-20.617,27.148)
O2: (0.427,-22.123,25.288)
C6: (3.838,-22.799,24.436)
C5: (4.514,-22.120,25.340)
O3': (2.660,-23.072,19.928)
OP1: (-9.873,-25.537,20.000)
OP2: (-9.636,-26.394,22.413)
C3': (-4.788,-25.344,21.420)
C1': (-4.755,-23.232,22.404)
C5': (-6.986,-24.999,20.135)
O6: (-6.222,-23.034,28.186)
O4': (-5.748,-23.218,21.386)
C8: (-6.701,-23.695,24.010)
C2: (-3.254,-22.353,26.424)
C6: (-5.468,-22.950,27.235)
C5: (-5.785,-23.222,25.882)
C4: (-4.811,-22.999,24.934)
P: (-9.200,-25.535,21.310)
C4': (-5.644,-24.437,20.572)
C2': (-3.799,-24.325,22.005)
O2': (-2.909,-23.699,21.081)
N1: (-4.172,-22.530,27.431)
N2: (-2.020,-21.914,26.766)
N3: (-3.528,-22.620,25.143)
N7: (-6.977,-23.652,25.293)
N9: (-5.396,-23.303,23.711)
O5': (-7.626,-25.759,21.129)
O3': (-4.143,-26.254,20.591)
OP2: (-9.636,-26.394,22.413)
C3': (-4.788,-25.344,21.420)
C1': (-4.755,-23.232,22.404)
C5': (-6.986,-24.999,20.135)
O6: (-6.222,-23.034,28.186)
O4': (-5.748,-23.218,21.386)
C8: (-6.701,-23.695,24.010)
C2: (-3.254,-22.353,26.424)
C6: (-5.468,-22.950,27.235)
C5: (-5.785,-23.222,25.882)
C4: (-4.811,-22.999,24.934)
P: (-9.200,-25.535,21.310)
C4': (-5.644,-24.437,20.572)
C2': (-3.799,-24.325,22.005)
O2': (-2.909,-23.699,21.081)
N1: (-4.172,-22.530,27.431)
N2: (-2.020,-21.914,26.766)
N3: (-3.528,-22.620,25.143)
N7: (-6.977,-23.652,25.293)
N9: (-5.396,-23.303,23.711)
O5': (-7.626,-25.759,21.129)
O3': (-4.143,-26.254,20.591)
Image (generated by PyMOL):