Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2657:A2649
Extra
PDB:
ATOM 1 O3' G A2656 -85.675 -42.238 -59.056 1.00 26.29 O
ATOM 2 P G A2657 -84.844 -43.594 -58.964 1.00 9.28 P
ATOM 3 OP1 G A2657 -84.540 -43.813 -57.520 1.00 9.28 O
ATOM 4 OP2 G A2657 -83.714 -43.482 -59.934 1.00 9.28 O
ATOM 5 O5' G A2657 -85.889 -44.680 -59.484 1.00 9.28 O
ATOM 6 C5' G A2657 -86.418 -45.678 -58.620 1.00 9.28 C
ATOM 7 C4' G A2657 -86.876 -46.899 -59.394 1.00 9.28 C
ATOM 8 O4' G A2657 -87.778 -46.515 -60.474 1.00 9.28 O
ATOM 9 C3' G A2657 -85.799 -47.683 -60.106 1.00 9.28 C
ATOM 10 O3' G A2657 -85.078 -48.513 -59.252 1.00 9.28 O
ATOM 11 C2' G A2657 -86.598 -48.443 -61.139 1.00 9.28 C
ATOM 12 O2' G A2657 -87.331 -49.489 -60.522 1.00 9.28 O
ATOM 13 C1' G A2657 -87.570 -47.361 -61.584 1.00 9.28 C
ATOM 14 N9 G A2657 -87.006 -46.543 -62.661 1.00 9.31 N
ATOM 15 C8 G A2657 -86.343 -45.373 -62.429 1.00 9.31 C
ATOM 16 N7 G A2657 -85.911 -44.801 -63.510 1.00 9.31 N
ATOM 17 C5 G A2657 -86.328 -45.645 -64.507 1.00 9.31 C
ATOM 18 C6 G A2657 -86.137 -45.507 -65.875 1.00 9.31 C
ATOM 19 O6 G A2657 -85.548 -44.574 -66.431 1.00 9.31 O
ATOM 20 N1 G A2657 -86.700 -46.560 -66.580 1.00 9.31 N
ATOM 21 C2 G A2657 -87.369 -47.617 -66.030 1.00 9.31 C
ATOM 22 N2 G A2657 -87.843 -48.547 -66.875 1.00 9.31 N
ATOM 23 N3 G A2657 -87.552 -47.744 -64.727 1.00 9.31 N
ATOM 24 C4 G A2657 -87.009 -46.725 -64.023 1.00 9.31 C
ATOM 25 P A A2658 -83.906 -49.398 -59.849 1.00 7.82 P
ATOM 26 OP1 A A2658 -83.353 -50.210 -58.737 1.00 7.82 O
ATOM 27 OP2 A A2658 -83.010 -48.485 -60.586 1.00 7.82 O
ATOM 28 O5' A A2658 -84.663 -50.332 -60.869 1.00 7.82 O
TER
ATOM 1 O3' G B2648 -84.960 -47.804 -70.506 1.00 23.68 O
ATOM 2 P U B2649 -86.473 -47.241 -70.579 1.00 16.42 P
ATOM 3 OP1 U B2649 -86.567 -46.369 -71.786 1.00 16.42 O
ATOM 4 OP2 U B2649 -86.792 -46.646 -69.261 1.00 16.42 O
ATOM 5 O5' U B2649 -87.339 -48.560 -70.793 1.00 16.42 O
ATOM 6 C5' U B2649 -87.346 -49.223 -72.035 1.00 16.42 C
ATOM 7 C4' U B2649 -87.083 -50.689 -71.865 1.00 16.42 C
ATOM 8 O4' U B2649 -85.852 -50.882 -71.107 1.00 16.42 O
ATOM 9 C3' U B2649 -88.130 -51.455 -71.078 1.00 16.42 C
ATOM 10 O3' U B2649 -89.269 -51.804 -71.854 1.00 16.42 O
ATOM 11 C2' U B2649 -87.339 -52.647 -70.563 1.00 16.42 C
ATOM 12 O2' U B2649 -87.156 -53.610 -71.587 1.00 16.42 O
ATOM 13 C1' U B2649 -85.985 -51.995 -70.251 1.00 16.42 C
ATOM 14 N1 U B2649 -85.907 -51.500 -68.852 1.00 16.37 N
ATOM 15 C2 U B2649 -86.359 -52.293 -67.813 1.00 16.37 C
ATOM 16 O2 U B2649 -86.807 -53.402 -67.976 1.00 16.37 O
ATOM 17 N3 U B2649 -86.269 -51.749 -66.564 1.00 16.37 N
ATOM 18 C4 U B2649 -85.770 -50.514 -66.237 1.00 16.37 C
ATOM 19 O4 U B2649 -85.753 -50.184 -65.054 1.00 16.37 O
ATOM 20 C5 U B2649 -85.318 -49.731 -67.347 1.00 16.37 C
ATOM 21 C6 U B2649 -85.405 -50.239 -68.589 1.00 16.37 C
ATOM 22 P A B2650 -90.692 -51.068 -71.599 1.00 10.23 P
ATOM 23 OP1 A B2650 -91.525 -51.301 -72.805 1.00 10.23 O
ATOM 24 OP2 A B2650 -90.406 -49.649 -71.168 1.00 10.23 O
ATOM 25 O5' A B2650 -91.292 -51.902 -70.390 1.00 10.23 O
TER
ATOM 2 P G A2657 -84.844 -43.594 -58.964 1.00 9.28 P
ATOM 3 OP1 G A2657 -84.540 -43.813 -57.520 1.00 9.28 O
ATOM 4 OP2 G A2657 -83.714 -43.482 -59.934 1.00 9.28 O
ATOM 5 O5' G A2657 -85.889 -44.680 -59.484 1.00 9.28 O
ATOM 6 C5' G A2657 -86.418 -45.678 -58.620 1.00 9.28 C
ATOM 7 C4' G A2657 -86.876 -46.899 -59.394 1.00 9.28 C
ATOM 8 O4' G A2657 -87.778 -46.515 -60.474 1.00 9.28 O
ATOM 9 C3' G A2657 -85.799 -47.683 -60.106 1.00 9.28 C
ATOM 10 O3' G A2657 -85.078 -48.513 -59.252 1.00 9.28 O
ATOM 11 C2' G A2657 -86.598 -48.443 -61.139 1.00 9.28 C
ATOM 12 O2' G A2657 -87.331 -49.489 -60.522 1.00 9.28 O
ATOM 13 C1' G A2657 -87.570 -47.361 -61.584 1.00 9.28 C
ATOM 14 N9 G A2657 -87.006 -46.543 -62.661 1.00 9.31 N
ATOM 15 C8 G A2657 -86.343 -45.373 -62.429 1.00 9.31 C
ATOM 16 N7 G A2657 -85.911 -44.801 -63.510 1.00 9.31 N
ATOM 17 C5 G A2657 -86.328 -45.645 -64.507 1.00 9.31 C
ATOM 18 C6 G A2657 -86.137 -45.507 -65.875 1.00 9.31 C
ATOM 19 O6 G A2657 -85.548 -44.574 -66.431 1.00 9.31 O
ATOM 20 N1 G A2657 -86.700 -46.560 -66.580 1.00 9.31 N
ATOM 21 C2 G A2657 -87.369 -47.617 -66.030 1.00 9.31 C
ATOM 22 N2 G A2657 -87.843 -48.547 -66.875 1.00 9.31 N
ATOM 23 N3 G A2657 -87.552 -47.744 -64.727 1.00 9.31 N
ATOM 24 C4 G A2657 -87.009 -46.725 -64.023 1.00 9.31 C
ATOM 25 P A A2658 -83.906 -49.398 -59.849 1.00 7.82 P
ATOM 26 OP1 A A2658 -83.353 -50.210 -58.737 1.00 7.82 O
ATOM 27 OP2 A A2658 -83.010 -48.485 -60.586 1.00 7.82 O
ATOM 28 O5' A A2658 -84.663 -50.332 -60.869 1.00 7.82 O
TER
ATOM 1 O3' G B2648 -84.960 -47.804 -70.506 1.00 23.68 O
ATOM 2 P U B2649 -86.473 -47.241 -70.579 1.00 16.42 P
ATOM 3 OP1 U B2649 -86.567 -46.369 -71.786 1.00 16.42 O
ATOM 4 OP2 U B2649 -86.792 -46.646 -69.261 1.00 16.42 O
ATOM 5 O5' U B2649 -87.339 -48.560 -70.793 1.00 16.42 O
ATOM 6 C5' U B2649 -87.346 -49.223 -72.035 1.00 16.42 C
ATOM 7 C4' U B2649 -87.083 -50.689 -71.865 1.00 16.42 C
ATOM 8 O4' U B2649 -85.852 -50.882 -71.107 1.00 16.42 O
ATOM 9 C3' U B2649 -88.130 -51.455 -71.078 1.00 16.42 C
ATOM 10 O3' U B2649 -89.269 -51.804 -71.854 1.00 16.42 O
ATOM 11 C2' U B2649 -87.339 -52.647 -70.563 1.00 16.42 C
ATOM 12 O2' U B2649 -87.156 -53.610 -71.587 1.00 16.42 O
ATOM 13 C1' U B2649 -85.985 -51.995 -70.251 1.00 16.42 C
ATOM 14 N1 U B2649 -85.907 -51.500 -68.852 1.00 16.37 N
ATOM 15 C2 U B2649 -86.359 -52.293 -67.813 1.00 16.37 C
ATOM 16 O2 U B2649 -86.807 -53.402 -67.976 1.00 16.37 O
ATOM 17 N3 U B2649 -86.269 -51.749 -66.564 1.00 16.37 N
ATOM 18 C4 U B2649 -85.770 -50.514 -66.237 1.00 16.37 C
ATOM 19 O4 U B2649 -85.753 -50.184 -65.054 1.00 16.37 O
ATOM 20 C5 U B2649 -85.318 -49.731 -67.347 1.00 16.37 C
ATOM 21 C6 U B2649 -85.405 -50.239 -68.589 1.00 16.37 C
ATOM 22 P A B2650 -90.692 -51.068 -71.599 1.00 10.23 P
ATOM 23 OP1 A B2650 -91.525 -51.301 -72.805 1.00 10.23 O
ATOM 24 OP2 A B2650 -90.406 -49.649 -71.168 1.00 10.23 O
ATOM 25 O5' A B2650 -91.292 -51.902 -70.390 1.00 10.23 O
TER
Atoms:
OP1: (-84.540,-43.813,-57.520)
OP2: (-83.714,-43.482,-59.934)
C3': (-85.799,-47.683,-60.106)
C1': (-87.570,-47.361,-61.584)
C5': (-86.418,-45.678,-58.620)
O6: (-85.548,-44.574,-66.431)
O4': (-87.778,-46.515,-60.474)
C8: (-86.343,-45.373,-62.429)
C2: (-87.369,-47.617,-66.030)
C6: (-86.137,-45.507,-65.875)
C5: (-86.328,-45.645,-64.507)
C4: (-87.009,-46.725,-64.023)
P: (-84.844,-43.594,-58.964)
C4': (-86.876,-46.899,-59.394)
C2': (-86.598,-48.443,-61.139)
O2': (-87.331,-49.489,-60.522)
N1: (-86.700,-46.560,-66.580)
N2: (-87.843,-48.547,-66.875)
N3: (-87.552,-47.744,-64.727)
N7: (-85.911,-44.801,-63.510)
N9: (-87.006,-46.543,-62.661)
O5': (-85.889,-44.680,-59.484)
O3': (-85.078,-48.513,-59.252)
OP2: (-83.714,-43.482,-59.934)
C3': (-85.799,-47.683,-60.106)
C1': (-87.570,-47.361,-61.584)
C5': (-86.418,-45.678,-58.620)
O6: (-85.548,-44.574,-66.431)
O4': (-87.778,-46.515,-60.474)
C8: (-86.343,-45.373,-62.429)
C2: (-87.369,-47.617,-66.030)
C6: (-86.137,-45.507,-65.875)
C5: (-86.328,-45.645,-64.507)
C4: (-87.009,-46.725,-64.023)
P: (-84.844,-43.594,-58.964)
C4': (-86.876,-46.899,-59.394)
C2': (-86.598,-48.443,-61.139)
O2': (-87.331,-49.489,-60.522)
N1: (-86.700,-46.560,-66.580)
N2: (-87.843,-48.547,-66.875)
N3: (-87.552,-47.744,-64.727)
N7: (-85.911,-44.801,-63.510)
N9: (-87.006,-46.543,-62.661)
O5': (-85.889,-44.680,-59.484)
O3': (-85.078,-48.513,-59.252)
C4: (-85.770,-50.514,-66.237)
N3: (-86.269,-51.749,-66.564)
OP1: (-86.567,-46.369,-71.786)
OP2: (-86.792,-46.646,-69.261)
C2: (-86.359,-52.293,-67.813)
C1': (-85.985,-51.995,-70.251)
C3': (-88.130,-51.455,-71.078)
O5': (-87.339,-48.560,-70.793)
O4': (-85.852,-50.882,-71.107)
C5': (-87.346,-49.223,-72.035)
P: (-86.473,-47.241,-70.579)
C4': (-87.083,-50.689,-71.865)
C2': (-87.339,-52.647,-70.563)
O2': (-87.156,-53.610,-71.587)
N1: (-85.907,-51.500,-68.852)
O4: (-85.753,-50.184,-65.054)
O2: (-86.807,-53.402,-67.976)
C6: (-85.405,-50.239,-68.589)
C5: (-85.318,-49.731,-67.347)
O3': (-89.269,-51.804,-71.854)
N3: (-86.269,-51.749,-66.564)
OP1: (-86.567,-46.369,-71.786)
OP2: (-86.792,-46.646,-69.261)
C2: (-86.359,-52.293,-67.813)
C1': (-85.985,-51.995,-70.251)
C3': (-88.130,-51.455,-71.078)
O5': (-87.339,-48.560,-70.793)
O4': (-85.852,-50.882,-71.107)
C5': (-87.346,-49.223,-72.035)
P: (-86.473,-47.241,-70.579)
C4': (-87.083,-50.689,-71.865)
C2': (-87.339,-52.647,-70.563)
O2': (-87.156,-53.610,-71.587)
N1: (-85.907,-51.500,-68.852)
O4: (-85.753,-50.184,-65.054)
O2: (-86.807,-53.402,-67.976)
C6: (-85.405,-50.239,-68.589)
C5: (-85.318,-49.731,-67.347)
O3': (-89.269,-51.804,-71.854)
Image (generated by PyMOL):