Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2681:A2713
Extra
PDB:
ATOM 1 O3' U A2680 -37.886 -54.293 -30.457 1.00 0.01 O
ATOM 2 P G A2681 -36.418 -53.745 -30.103 1.00 0.01 P
ATOM 3 OP1 G A2681 -36.355 -53.592 -28.642 1.00 0.01 O
ATOM 4 OP2 G A2681 -36.187 -52.563 -30.930 1.00 0.01 O
ATOM 5 O5' G A2681 -35.455 -54.932 -30.595 1.00 0.01 O
ATOM 6 C5' G A2681 -35.562 -56.254 -30.078 1.00 0.01 C
ATOM 7 C4' G A2681 -34.917 -57.280 -30.989 1.00 0.01 C
ATOM 8 O4' G A2681 -35.671 -57.399 -32.216 1.00 0.01 O
ATOM 9 C3' G A2681 -33.534 -56.974 -31.486 1.00 0.01 C
ATOM 10 O3' G A2681 -32.516 -57.200 -30.533 1.00 0.01 O
ATOM 11 C2' G A2681 -33.444 -57.872 -32.711 1.00 0.01 C
ATOM 12 O2' G A2681 -33.315 -59.227 -32.339 1.00 0.01 O
ATOM 13 C1' G A2681 -34.814 -57.701 -33.284 1.00 0.01 C
ATOM 14 N9 G A2681 -34.874 -56.621 -34.272 1.00 0.01 N
ATOM 15 C8 G A2681 -34.991 -55.260 -34.186 1.00 0.01 C
ATOM 16 N7 G A2681 -35.033 -54.644 -35.353 1.00 0.01 N
ATOM 17 C5 G A2681 -34.944 -55.673 -36.248 1.00 0.01 C
ATOM 18 C6 G A2681 -34.932 -55.714 -37.640 1.00 0.01 C
ATOM 19 O6 G A2681 -34.987 -54.842 -38.484 1.00 0.01 O
ATOM 20 N1 G A2681 -34.823 -56.997 -38.106 1.00 0.01 N
ATOM 21 C2 G A2681 -34.726 -58.123 -37.361 1.00 0.01 C
ATOM 22 N2 G A2681 -34.633 -59.281 -38.009 1.00 0.01 N
ATOM 23 N3 G A2681 -34.727 -58.100 -36.066 1.00 0.01 N
ATOM 24 C4 G A2681 -34.841 -56.863 -35.592 1.00 0.01 C
ATOM 25 P U A2682 -31.036 -56.652 -30.829 1.00 0.01 P
ATOM 26 OP1 U A2682 -31.163 -55.259 -31.233 1.00 0.01 O
ATOM 27 OP2 U A2682 -30.407 -57.587 -31.735 1.00 0.01 O
ATOM 28 O5' U A2682 -30.338 -56.713 -29.432 1.00 0.01 O
TER
ATOM 1 O3' G B2712 -32.243 -55.736 -41.741 1.00 0.01 O
ATOM 2 P U B2713 -33.487 -56.715 -41.819 1.00 0.01 P
ATOM 3 OP1 U B2713 -34.004 -56.632 -43.178 1.00 0.01 O
ATOM 4 OP2 U B2713 -34.383 -56.366 -40.696 1.00 0.01 O
ATOM 5 O5' U B2713 -32.813 -58.122 -41.587 1.00 0.01 O
ATOM 6 C5' U B2713 -31.414 -58.274 -41.787 1.00 0.01 C
ATOM 7 C4' U B2713 -30.996 -59.719 -41.751 1.00 0.01 C
ATOM 8 O4' U B2713 -30.052 -59.944 -40.660 1.00 0.00 O
ATOM 9 C3' U B2713 -32.101 -60.698 -41.480 1.00 0.01 C
ATOM 10 O3' U B2713 -32.885 -60.964 -42.639 1.00 0.01 O
ATOM 11 C2' U B2713 -31.320 -61.885 -40.940 1.00 0.01 C
ATOM 12 O2' U B2713 -30.583 -62.504 -41.978 1.00 0.01 O
ATOM 13 C1' U B2713 -30.318 -61.181 -40.051 1.00 0.01 C
ATOM 14 N1 U B2713 -30.819 -60.934 -38.657 1.00 0.01 N
ATOM 15 C2 U B2713 -30.687 -61.892 -37.664 1.00 0.01 C
ATOM 16 O2 U B2713 -30.245 -62.994 -37.848 1.00 0.01 O
ATOM 17 N3 U B2713 -31.116 -61.580 -36.415 1.00 0.01 N
ATOM 18 C4 U B2713 -31.653 -60.405 -35.979 1.00 0.01 C
ATOM 19 O4 U B2713 -32.000 -60.298 -34.785 1.00 0.01 O
ATOM 20 C5 U B2713 -31.742 -59.432 -37.032 1.00 0.01 C
ATOM 21 C6 U B2713 -31.325 -59.717 -38.278 1.00 0.01 C
ATOM 22 P A B2714 -34.152 -61.941 -42.555 1.00 0.01 P
ATOM 23 OP1 A B2714 -34.589 -62.204 -43.932 1.00 0.01 O
ATOM 24 OP2 A B2714 -35.115 -61.341 -41.599 1.00 0.01 O
ATOM 25 O5' A B2714 -33.502 -63.237 -41.929 1.00 0.01 O
TER
ATOM 2 P G A2681 -36.418 -53.745 -30.103 1.00 0.01 P
ATOM 3 OP1 G A2681 -36.355 -53.592 -28.642 1.00 0.01 O
ATOM 4 OP2 G A2681 -36.187 -52.563 -30.930 1.00 0.01 O
ATOM 5 O5' G A2681 -35.455 -54.932 -30.595 1.00 0.01 O
ATOM 6 C5' G A2681 -35.562 -56.254 -30.078 1.00 0.01 C
ATOM 7 C4' G A2681 -34.917 -57.280 -30.989 1.00 0.01 C
ATOM 8 O4' G A2681 -35.671 -57.399 -32.216 1.00 0.01 O
ATOM 9 C3' G A2681 -33.534 -56.974 -31.486 1.00 0.01 C
ATOM 10 O3' G A2681 -32.516 -57.200 -30.533 1.00 0.01 O
ATOM 11 C2' G A2681 -33.444 -57.872 -32.711 1.00 0.01 C
ATOM 12 O2' G A2681 -33.315 -59.227 -32.339 1.00 0.01 O
ATOM 13 C1' G A2681 -34.814 -57.701 -33.284 1.00 0.01 C
ATOM 14 N9 G A2681 -34.874 -56.621 -34.272 1.00 0.01 N
ATOM 15 C8 G A2681 -34.991 -55.260 -34.186 1.00 0.01 C
ATOM 16 N7 G A2681 -35.033 -54.644 -35.353 1.00 0.01 N
ATOM 17 C5 G A2681 -34.944 -55.673 -36.248 1.00 0.01 C
ATOM 18 C6 G A2681 -34.932 -55.714 -37.640 1.00 0.01 C
ATOM 19 O6 G A2681 -34.987 -54.842 -38.484 1.00 0.01 O
ATOM 20 N1 G A2681 -34.823 -56.997 -38.106 1.00 0.01 N
ATOM 21 C2 G A2681 -34.726 -58.123 -37.361 1.00 0.01 C
ATOM 22 N2 G A2681 -34.633 -59.281 -38.009 1.00 0.01 N
ATOM 23 N3 G A2681 -34.727 -58.100 -36.066 1.00 0.01 N
ATOM 24 C4 G A2681 -34.841 -56.863 -35.592 1.00 0.01 C
ATOM 25 P U A2682 -31.036 -56.652 -30.829 1.00 0.01 P
ATOM 26 OP1 U A2682 -31.163 -55.259 -31.233 1.00 0.01 O
ATOM 27 OP2 U A2682 -30.407 -57.587 -31.735 1.00 0.01 O
ATOM 28 O5' U A2682 -30.338 -56.713 -29.432 1.00 0.01 O
TER
ATOM 1 O3' G B2712 -32.243 -55.736 -41.741 1.00 0.01 O
ATOM 2 P U B2713 -33.487 -56.715 -41.819 1.00 0.01 P
ATOM 3 OP1 U B2713 -34.004 -56.632 -43.178 1.00 0.01 O
ATOM 4 OP2 U B2713 -34.383 -56.366 -40.696 1.00 0.01 O
ATOM 5 O5' U B2713 -32.813 -58.122 -41.587 1.00 0.01 O
ATOM 6 C5' U B2713 -31.414 -58.274 -41.787 1.00 0.01 C
ATOM 7 C4' U B2713 -30.996 -59.719 -41.751 1.00 0.01 C
ATOM 8 O4' U B2713 -30.052 -59.944 -40.660 1.00 0.00 O
ATOM 9 C3' U B2713 -32.101 -60.698 -41.480 1.00 0.01 C
ATOM 10 O3' U B2713 -32.885 -60.964 -42.639 1.00 0.01 O
ATOM 11 C2' U B2713 -31.320 -61.885 -40.940 1.00 0.01 C
ATOM 12 O2' U B2713 -30.583 -62.504 -41.978 1.00 0.01 O
ATOM 13 C1' U B2713 -30.318 -61.181 -40.051 1.00 0.01 C
ATOM 14 N1 U B2713 -30.819 -60.934 -38.657 1.00 0.01 N
ATOM 15 C2 U B2713 -30.687 -61.892 -37.664 1.00 0.01 C
ATOM 16 O2 U B2713 -30.245 -62.994 -37.848 1.00 0.01 O
ATOM 17 N3 U B2713 -31.116 -61.580 -36.415 1.00 0.01 N
ATOM 18 C4 U B2713 -31.653 -60.405 -35.979 1.00 0.01 C
ATOM 19 O4 U B2713 -32.000 -60.298 -34.785 1.00 0.01 O
ATOM 20 C5 U B2713 -31.742 -59.432 -37.032 1.00 0.01 C
ATOM 21 C6 U B2713 -31.325 -59.717 -38.278 1.00 0.01 C
ATOM 22 P A B2714 -34.152 -61.941 -42.555 1.00 0.01 P
ATOM 23 OP1 A B2714 -34.589 -62.204 -43.932 1.00 0.01 O
ATOM 24 OP2 A B2714 -35.115 -61.341 -41.599 1.00 0.01 O
ATOM 25 O5' A B2714 -33.502 -63.237 -41.929 1.00 0.01 O
TER
Atoms:
OP1: (-36.355,-53.592,-28.642)
OP2: (-36.187,-52.563,-30.930)
C3': (-33.534,-56.974,-31.486)
C1': (-34.814,-57.701,-33.284)
C5': (-35.562,-56.254,-30.078)
O6: (-34.987,-54.842,-38.484)
O4': (-35.671,-57.399,-32.216)
C8: (-34.991,-55.260,-34.186)
C2: (-34.726,-58.123,-37.361)
C6: (-34.932,-55.714,-37.640)
C5: (-34.944,-55.673,-36.248)
C4: (-34.841,-56.863,-35.592)
P: (-36.418,-53.745,-30.103)
C4': (-34.917,-57.280,-30.989)
C2': (-33.444,-57.872,-32.711)
O2': (-33.315,-59.227,-32.339)
N1: (-34.823,-56.997,-38.106)
N2: (-34.633,-59.281,-38.009)
N3: (-34.727,-58.100,-36.066)
N7: (-35.033,-54.644,-35.353)
N9: (-34.874,-56.621,-34.272)
O5': (-35.455,-54.932,-30.595)
O3': (-32.516,-57.200,-30.533)
OP2: (-36.187,-52.563,-30.930)
C3': (-33.534,-56.974,-31.486)
C1': (-34.814,-57.701,-33.284)
C5': (-35.562,-56.254,-30.078)
O6: (-34.987,-54.842,-38.484)
O4': (-35.671,-57.399,-32.216)
C8: (-34.991,-55.260,-34.186)
C2: (-34.726,-58.123,-37.361)
C6: (-34.932,-55.714,-37.640)
C5: (-34.944,-55.673,-36.248)
C4: (-34.841,-56.863,-35.592)
P: (-36.418,-53.745,-30.103)
C4': (-34.917,-57.280,-30.989)
C2': (-33.444,-57.872,-32.711)
O2': (-33.315,-59.227,-32.339)
N1: (-34.823,-56.997,-38.106)
N2: (-34.633,-59.281,-38.009)
N3: (-34.727,-58.100,-36.066)
N7: (-35.033,-54.644,-35.353)
N9: (-34.874,-56.621,-34.272)
O5': (-35.455,-54.932,-30.595)
O3': (-32.516,-57.200,-30.533)
C4: (-31.653,-60.405,-35.979)
N3: (-31.116,-61.580,-36.415)
OP1: (-34.004,-56.632,-43.178)
OP2: (-34.383,-56.366,-40.696)
C2: (-30.687,-61.892,-37.664)
C1': (-30.318,-61.181,-40.051)
C3': (-32.101,-60.698,-41.480)
O5': (-32.813,-58.122,-41.587)
O4': (-30.052,-59.944,-40.660)
C5': (-31.414,-58.274,-41.787)
P: (-33.487,-56.715,-41.819)
C4': (-30.996,-59.719,-41.751)
C2': (-31.320,-61.885,-40.940)
O2': (-30.583,-62.504,-41.978)
N1: (-30.819,-60.934,-38.657)
O4: (-32.000,-60.298,-34.785)
O2: (-30.245,-62.994,-37.848)
C6: (-31.325,-59.717,-38.278)
C5: (-31.742,-59.432,-37.032)
O3': (-32.885,-60.964,-42.639)
N3: (-31.116,-61.580,-36.415)
OP1: (-34.004,-56.632,-43.178)
OP2: (-34.383,-56.366,-40.696)
C2: (-30.687,-61.892,-37.664)
C1': (-30.318,-61.181,-40.051)
C3': (-32.101,-60.698,-41.480)
O5': (-32.813,-58.122,-41.587)
O4': (-30.052,-59.944,-40.660)
C5': (-31.414,-58.274,-41.787)
P: (-33.487,-56.715,-41.819)
C4': (-30.996,-59.719,-41.751)
C2': (-31.320,-61.885,-40.940)
O2': (-30.583,-62.504,-41.978)
N1: (-30.819,-60.934,-38.657)
O4: (-32.000,-60.298,-34.785)
O2: (-30.245,-62.994,-37.848)
C6: (-31.325,-59.717,-38.278)
C5: (-31.742,-59.432,-37.032)
O3': (-32.885,-60.964,-42.639)
Image (generated by PyMOL):