Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2G:B58:B12
Extra
PDB:
ATOM 1 O3' A A 57 4.036 -29.827 0.822 1.00 46.73 O
ATOM 2 P U A 58 4.586 -31.004 1.774 1.00 52.26 P
ATOM 3 OP1 U A 58 5.199 -30.327 2.918 1.00 39.92 O
ATOM 4 OP2 U A 58 5.393 -31.909 0.943 1.00 51.63 O
ATOM 5 O5' U A 58 3.252 -31.753 2.276 1.00 46.19 O
ATOM 6 C5' U A 58 2.142 -30.918 2.747 1.00 44.78 C
ATOM 7 C4' U A 58 0.844 -31.710 2.660 1.00 44.59 C
ATOM 8 O4' U A 58 0.342 -31.750 1.307 1.00 40.51 O
ATOM 9 C3' U A 58 0.983 -33.190 2.996 1.00 41.75 C
ATOM 10 O3' U A 58 0.999 -33.446 4.405 1.00 42.97 O
ATOM 11 C2' U A 58 -0.363 -33.654 2.496 1.00 43.15 C
ATOM 12 O2' U A 58 -1.368 -33.200 3.391 1.00 34.47 O
ATOM 13 C1' U A 58 -0.454 -32.922 1.170 1.00 39.36 C
ATOM 14 N1 U A 58 0.043 -33.739 0.030 1.00 38.07 N
ATOM 15 C2 U A 58 -0.916 -34.327 -0.682 1.00 38.92 C
ATOM 16 O2 U A 58 -2.063 -34.176 -0.355 1.00 43.42 O
ATOM 17 N3 U A 58 -0.525 -35.078 -1.763 1.00 40.62 N
ATOM 18 C4 U A 58 0.767 -35.270 -2.197 1.00 44.35 C
ATOM 19 O4 U A 58 0.968 -36.009 -3.180 1.00 45.68 O
ATOM 20 C5 U A 58 1.749 -34.573 -1.379 1.00 41.86 C
ATOM 21 C6 U A 58 1.360 -33.856 -0.313 1.00 39.74 C
ATOM 22 P G A 59 1.804 -34.705 5.097 1.00 60.70 P
ATOM 23 OP1 G A 59 1.632 -34.654 6.540 1.00 57.22 O
ATOM 24 OP2 G A 59 3.170 -34.828 4.588 1.00 60.77 O
ATOM 25 O5' G A 59 0.970 -35.935 4.596 1.00 64.46 O
TER
ATOM 1 O3' U B 11 -11.266 -31.553 4.299 1.00 42.92 O
ATOM 2 P G B 12 -10.808 -30.065 4.723 1.00 51.67 P
ATOM 3 OP1 G B 12 -11.265 -29.800 6.116 1.00 48.12 O
ATOM 4 OP2 G B 12 -11.172 -29.155 3.598 1.00 41.11 O
ATOM 5 O5' G B 12 -9.187 -30.154 4.784 1.00 43.97 O
ATOM 6 C5' G B 12 -8.485 -30.996 5.739 1.00 41.12 C
ATOM 7 C4' G B 12 -7.249 -31.604 5.125 1.00 41.12 C
ATOM 8 O4' G B 12 -7.670 -32.702 4.222 1.00 40.66 O
ATOM 9 C3' G B 12 -6.486 -30.698 4.161 1.00 42.10 C
ATOM 10 O3' G B 12 -5.588 -29.833 4.765 1.00 39.86 O
ATOM 11 C2' G B 12 -5.697 -31.758 3.352 1.00 42.39 C
ATOM 12 O2' G B 12 -4.795 -32.512 4.125 1.00 38.43 O
ATOM 13 C1' G B 12 -6.795 -32.725 3.107 1.00 38.03 C
ATOM 14 N9 G B 12 -7.578 -32.554 1.917 1.00 43.34 N
ATOM 15 C8 G B 12 -8.900 -32.174 1.820 1.00 43.45 C
ATOM 16 N7 G B 12 -9.335 -32.168 0.589 1.00 42.39 N
ATOM 17 C5 G B 12 -8.234 -32.634 -0.161 1.00 48.12 C
ATOM 18 C6 G B 12 -8.091 -32.895 -1.558 1.00 48.37 C
ATOM 19 O6 G B 12 -8.949 -32.743 -2.415 1.00 44.95 O
ATOM 20 N1 G B 12 -6.819 -33.344 -1.908 1.00 44.88 N
ATOM 21 C2 G B 12 -5.785 -33.552 -1.014 1.00 44.46 C
ATOM 22 N2 G B 12 -4.605 -34.012 -1.498 1.00 39.01 N
ATOM 23 N3 G B 12 -5.905 -33.330 0.299 1.00 45.14 N
ATOM 24 C4 G B 12 -7.150 -32.887 0.643 1.00 45.00 C
ATOM 25 P C B 13 -5.241 -28.412 4.164 1.00 39.60 P
ATOM 26 OP1 C B 13 -4.330 -27.768 5.142 1.00 44.24 O
ATOM 27 OP2 C B 13 -6.485 -27.822 3.557 1.00 41.13 O
ATOM 28 O5' C B 13 -4.317 -28.738 2.900 1.00 43.08 O
TER
ATOM 2 P U A 58 4.586 -31.004 1.774 1.00 52.26 P
ATOM 3 OP1 U A 58 5.199 -30.327 2.918 1.00 39.92 O
ATOM 4 OP2 U A 58 5.393 -31.909 0.943 1.00 51.63 O
ATOM 5 O5' U A 58 3.252 -31.753 2.276 1.00 46.19 O
ATOM 6 C5' U A 58 2.142 -30.918 2.747 1.00 44.78 C
ATOM 7 C4' U A 58 0.844 -31.710 2.660 1.00 44.59 C
ATOM 8 O4' U A 58 0.342 -31.750 1.307 1.00 40.51 O
ATOM 9 C3' U A 58 0.983 -33.190 2.996 1.00 41.75 C
ATOM 10 O3' U A 58 0.999 -33.446 4.405 1.00 42.97 O
ATOM 11 C2' U A 58 -0.363 -33.654 2.496 1.00 43.15 C
ATOM 12 O2' U A 58 -1.368 -33.200 3.391 1.00 34.47 O
ATOM 13 C1' U A 58 -0.454 -32.922 1.170 1.00 39.36 C
ATOM 14 N1 U A 58 0.043 -33.739 0.030 1.00 38.07 N
ATOM 15 C2 U A 58 -0.916 -34.327 -0.682 1.00 38.92 C
ATOM 16 O2 U A 58 -2.063 -34.176 -0.355 1.00 43.42 O
ATOM 17 N3 U A 58 -0.525 -35.078 -1.763 1.00 40.62 N
ATOM 18 C4 U A 58 0.767 -35.270 -2.197 1.00 44.35 C
ATOM 19 O4 U A 58 0.968 -36.009 -3.180 1.00 45.68 O
ATOM 20 C5 U A 58 1.749 -34.573 -1.379 1.00 41.86 C
ATOM 21 C6 U A 58 1.360 -33.856 -0.313 1.00 39.74 C
ATOM 22 P G A 59 1.804 -34.705 5.097 1.00 60.70 P
ATOM 23 OP1 G A 59 1.632 -34.654 6.540 1.00 57.22 O
ATOM 24 OP2 G A 59 3.170 -34.828 4.588 1.00 60.77 O
ATOM 25 O5' G A 59 0.970 -35.935 4.596 1.00 64.46 O
TER
ATOM 1 O3' U B 11 -11.266 -31.553 4.299 1.00 42.92 O
ATOM 2 P G B 12 -10.808 -30.065 4.723 1.00 51.67 P
ATOM 3 OP1 G B 12 -11.265 -29.800 6.116 1.00 48.12 O
ATOM 4 OP2 G B 12 -11.172 -29.155 3.598 1.00 41.11 O
ATOM 5 O5' G B 12 -9.187 -30.154 4.784 1.00 43.97 O
ATOM 6 C5' G B 12 -8.485 -30.996 5.739 1.00 41.12 C
ATOM 7 C4' G B 12 -7.249 -31.604 5.125 1.00 41.12 C
ATOM 8 O4' G B 12 -7.670 -32.702 4.222 1.00 40.66 O
ATOM 9 C3' G B 12 -6.486 -30.698 4.161 1.00 42.10 C
ATOM 10 O3' G B 12 -5.588 -29.833 4.765 1.00 39.86 O
ATOM 11 C2' G B 12 -5.697 -31.758 3.352 1.00 42.39 C
ATOM 12 O2' G B 12 -4.795 -32.512 4.125 1.00 38.43 O
ATOM 13 C1' G B 12 -6.795 -32.725 3.107 1.00 38.03 C
ATOM 14 N9 G B 12 -7.578 -32.554 1.917 1.00 43.34 N
ATOM 15 C8 G B 12 -8.900 -32.174 1.820 1.00 43.45 C
ATOM 16 N7 G B 12 -9.335 -32.168 0.589 1.00 42.39 N
ATOM 17 C5 G B 12 -8.234 -32.634 -0.161 1.00 48.12 C
ATOM 18 C6 G B 12 -8.091 -32.895 -1.558 1.00 48.37 C
ATOM 19 O6 G B 12 -8.949 -32.743 -2.415 1.00 44.95 O
ATOM 20 N1 G B 12 -6.819 -33.344 -1.908 1.00 44.88 N
ATOM 21 C2 G B 12 -5.785 -33.552 -1.014 1.00 44.46 C
ATOM 22 N2 G B 12 -4.605 -34.012 -1.498 1.00 39.01 N
ATOM 23 N3 G B 12 -5.905 -33.330 0.299 1.00 45.14 N
ATOM 24 C4 G B 12 -7.150 -32.887 0.643 1.00 45.00 C
ATOM 25 P C B 13 -5.241 -28.412 4.164 1.00 39.60 P
ATOM 26 OP1 C B 13 -4.330 -27.768 5.142 1.00 44.24 O
ATOM 27 OP2 C B 13 -6.485 -27.822 3.557 1.00 41.13 O
ATOM 28 O5' C B 13 -4.317 -28.738 2.900 1.00 43.08 O
TER
Atoms:
C4: (0.767,-35.270,-2.197)
N3: (-0.525,-35.078,-1.763)
OP1: (5.199,-30.327,2.918)
OP2: (5.393,-31.909,0.943)
C2: (-0.916,-34.327,-0.682)
C1': (-0.454,-32.922,1.170)
C3': (0.983,-33.190,2.996)
O5': (3.252,-31.753,2.276)
O4': (0.342,-31.750,1.307)
C5': (2.142,-30.918,2.747)
P: (4.586,-31.004,1.774)
C4': (0.844,-31.710,2.660)
C2': (-0.363,-33.654,2.496)
O2': (-1.368,-33.200,3.391)
N1: (0.043,-33.739,0.030)
O4: (0.968,-36.009,-3.180)
O2: (-2.063,-34.176,-0.355)
C6: (1.360,-33.856,-0.313)
C5: (1.749,-34.573,-1.379)
O3': (0.999,-33.446,4.405)
N3: (-0.525,-35.078,-1.763)
OP1: (5.199,-30.327,2.918)
OP2: (5.393,-31.909,0.943)
C2: (-0.916,-34.327,-0.682)
C1': (-0.454,-32.922,1.170)
C3': (0.983,-33.190,2.996)
O5': (3.252,-31.753,2.276)
O4': (0.342,-31.750,1.307)
C5': (2.142,-30.918,2.747)
P: (4.586,-31.004,1.774)
C4': (0.844,-31.710,2.660)
C2': (-0.363,-33.654,2.496)
O2': (-1.368,-33.200,3.391)
N1: (0.043,-33.739,0.030)
O4: (0.968,-36.009,-3.180)
O2: (-2.063,-34.176,-0.355)
C6: (1.360,-33.856,-0.313)
C5: (1.749,-34.573,-1.379)
O3': (0.999,-33.446,4.405)
OP1: (-11.265,-29.800,6.116)
OP2: (-11.172,-29.155,3.598)
C3': (-6.486,-30.698,4.161)
C1': (-6.795,-32.725,3.107)
C5': (-8.485,-30.996,5.739)
O6: (-8.949,-32.743,-2.415)
O4': (-7.670,-32.702,4.222)
C8: (-8.900,-32.174,1.820)
C2: (-5.785,-33.552,-1.014)
C6: (-8.091,-32.895,-1.558)
C5: (-8.234,-32.634,-0.161)
C4: (-7.150,-32.887,0.643)
P: (-10.808,-30.065,4.723)
C4': (-7.249,-31.604,5.125)
C2': (-5.697,-31.758,3.352)
O2': (-4.795,-32.512,4.125)
N1: (-6.819,-33.344,-1.908)
N2: (-4.605,-34.012,-1.498)
N3: (-5.905,-33.330,0.299)
N7: (-9.335,-32.168,0.589)
N9: (-7.578,-32.554,1.917)
O5': (-9.187,-30.154,4.784)
O3': (-5.588,-29.833,4.765)
OP2: (-11.172,-29.155,3.598)
C3': (-6.486,-30.698,4.161)
C1': (-6.795,-32.725,3.107)
C5': (-8.485,-30.996,5.739)
O6: (-8.949,-32.743,-2.415)
O4': (-7.670,-32.702,4.222)
C8: (-8.900,-32.174,1.820)
C2: (-5.785,-33.552,-1.014)
C6: (-8.091,-32.895,-1.558)
C5: (-8.234,-32.634,-0.161)
C4: (-7.150,-32.887,0.643)
P: (-10.808,-30.065,4.723)
C4': (-7.249,-31.604,5.125)
C2': (-5.697,-31.758,3.352)
O2': (-4.795,-32.512,4.125)
N1: (-6.819,-33.344,-1.908)
N2: (-4.605,-34.012,-1.498)
N3: (-5.905,-33.330,0.299)
N7: (-9.335,-32.168,0.589)
N9: (-7.578,-32.554,1.917)
O5': (-9.187,-30.154,4.784)
O3': (-5.588,-29.833,4.765)
Image (generated by PyMOL):