Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQO:0280:0347
Extra
PDB:
ATOM 1 O3' C A 279 54.784 128.502 -1.776 1.00 83.69 O
ATOM 2 P G A 280 54.186 129.272 -0.498 1.00 83.09 P
ATOM 3 OP1 G A 280 53.254 130.320 -0.995 1.00 82.74 O
ATOM 4 OP2 G A 280 55.329 129.655 0.371 1.00 82.85 O
ATOM 5 O5' G A 280 53.326 128.164 0.258 1.00 83.51 O
ATOM 6 C5' G A 280 52.148 127.586 -0.348 1.00 83.75 C
ATOM 7 C4' G A 280 51.745 126.332 0.396 1.00 84.22 C
ATOM 8 O4' G A 280 52.795 125.336 0.256 1.00 84.27 O
ATOM 9 C3' G A 280 51.586 126.495 1.901 1.00 84.46 C
ATOM 10 O3' G A 280 50.312 127.023 2.261 1.00 86.20 O
ATOM 11 C2' G A 280 51.827 125.079 2.405 1.00 83.29 C
ATOM 12 O2' G A 280 50.717 124.225 2.222 1.00 81.93 O
ATOM 13 C1' G A 280 52.960 124.635 1.480 1.00 83.19 C
ATOM 14 N9 G A 280 54.273 124.975 2.023 1.00 82.58 N
ATOM 15 C8 G A 280 54.978 126.141 1.828 1.00 82.24 C
ATOM 16 N7 G A 280 56.123 126.159 2.452 1.00 81.89 N
ATOM 17 C5 G A 280 56.181 124.930 3.097 1.00 82.09 C
ATOM 18 C6 G A 280 57.188 124.374 3.932 1.00 81.79 C
ATOM 19 O6 G A 280 58.267 124.870 4.270 1.00 81.12 O
ATOM 20 N1 G A 280 56.836 123.104 4.381 1.00 80.77 N
ATOM 21 C2 G A 280 55.669 122.451 4.067 1.00 80.70 C
ATOM 22 N2 G A 280 55.509 121.238 4.599 1.00 80.40 N
ATOM 23 N3 G A 280 54.726 122.954 3.288 1.00 81.53 N
ATOM 24 C4 G A 280 55.045 124.188 2.842 1.00 82.25 C
ATOM 25 P A A 281 50.139 127.795 3.664 1.00 86.77 P
ATOM 26 OP1 A A 281 48.809 128.465 3.633 1.00 85.88 O
ATOM 27 OP2 A A 281 51.365 128.605 3.915 1.00 85.19 O
ATOM 28 O5' A A 281 50.097 126.611 4.731 1.00 85.33 O
TER
ATOM 1 O3' G B 346 58.232 122.682 8.269 1.00 90.57 O
ATOM 2 P U B 347 59.113 121.571 7.503 1.00 90.50 P
ATOM 3 OP1 U B 347 60.452 121.453 8.148 1.00 90.24 O
ATOM 4 OP2 U B 347 59.018 121.857 6.048 1.00 90.61 O
ATOM 5 O5' U B 347 58.305 120.220 7.745 1.00 90.05 O
ATOM 6 C5' U B 347 58.418 119.491 8.983 1.00 89.97 C
ATOM 7 C4' U B 347 57.081 118.894 9.357 1.00 89.39 C
ATOM 8 O4' U B 347 56.158 119.955 9.706 1.00 88.21 O
ATOM 9 C3' U B 347 56.380 118.129 8.246 1.00 89.82 C
ATOM 10 O3' U B 347 56.863 116.789 8.182 1.00 92.43 O
ATOM 11 C2' U B 347 54.916 118.198 8.666 1.00 88.56 C
ATOM 12 O2' U B 347 54.577 117.228 9.636 1.00 88.00 O
ATOM 13 C1' U B 347 54.846 119.587 9.313 1.00 88.10 C
ATOM 14 N1 U B 347 54.267 120.669 8.495 1.00 87.00 N
ATOM 15 C2 U B 347 52.935 120.557 8.122 1.00 86.67 C
ATOM 16 O2 U B 347 52.241 119.590 8.403 1.00 87.68 O
ATOM 17 N3 U B 347 52.444 121.621 7.406 1.00 86.46 N
ATOM 18 C4 U B 347 53.124 122.760 7.029 1.00 85.96 C
ATOM 19 O4 U B 347 52.529 123.640 6.400 1.00 84.71 O
ATOM 20 C5 U B 347 54.497 122.793 7.428 1.00 86.08 C
ATOM 21 C6 U B 347 55.010 121.774 8.125 1.00 86.45 C
ATOM 22 P A B 348 56.929 116.022 6.769 1.00 93.89 P
ATOM 23 OP1 A B 348 57.513 114.683 7.059 1.00 94.06 O
ATOM 24 OP2 A B 348 57.584 116.901 5.766 1.00 93.31 O
ATOM 25 O5' A B 348 55.399 115.839 6.355 1.00 92.12 O
TER
ATOM 2 P G A 280 54.186 129.272 -0.498 1.00 83.09 P
ATOM 3 OP1 G A 280 53.254 130.320 -0.995 1.00 82.74 O
ATOM 4 OP2 G A 280 55.329 129.655 0.371 1.00 82.85 O
ATOM 5 O5' G A 280 53.326 128.164 0.258 1.00 83.51 O
ATOM 6 C5' G A 280 52.148 127.586 -0.348 1.00 83.75 C
ATOM 7 C4' G A 280 51.745 126.332 0.396 1.00 84.22 C
ATOM 8 O4' G A 280 52.795 125.336 0.256 1.00 84.27 O
ATOM 9 C3' G A 280 51.586 126.495 1.901 1.00 84.46 C
ATOM 10 O3' G A 280 50.312 127.023 2.261 1.00 86.20 O
ATOM 11 C2' G A 280 51.827 125.079 2.405 1.00 83.29 C
ATOM 12 O2' G A 280 50.717 124.225 2.222 1.00 81.93 O
ATOM 13 C1' G A 280 52.960 124.635 1.480 1.00 83.19 C
ATOM 14 N9 G A 280 54.273 124.975 2.023 1.00 82.58 N
ATOM 15 C8 G A 280 54.978 126.141 1.828 1.00 82.24 C
ATOM 16 N7 G A 280 56.123 126.159 2.452 1.00 81.89 N
ATOM 17 C5 G A 280 56.181 124.930 3.097 1.00 82.09 C
ATOM 18 C6 G A 280 57.188 124.374 3.932 1.00 81.79 C
ATOM 19 O6 G A 280 58.267 124.870 4.270 1.00 81.12 O
ATOM 20 N1 G A 280 56.836 123.104 4.381 1.00 80.77 N
ATOM 21 C2 G A 280 55.669 122.451 4.067 1.00 80.70 C
ATOM 22 N2 G A 280 55.509 121.238 4.599 1.00 80.40 N
ATOM 23 N3 G A 280 54.726 122.954 3.288 1.00 81.53 N
ATOM 24 C4 G A 280 55.045 124.188 2.842 1.00 82.25 C
ATOM 25 P A A 281 50.139 127.795 3.664 1.00 86.77 P
ATOM 26 OP1 A A 281 48.809 128.465 3.633 1.00 85.88 O
ATOM 27 OP2 A A 281 51.365 128.605 3.915 1.00 85.19 O
ATOM 28 O5' A A 281 50.097 126.611 4.731 1.00 85.33 O
TER
ATOM 1 O3' G B 346 58.232 122.682 8.269 1.00 90.57 O
ATOM 2 P U B 347 59.113 121.571 7.503 1.00 90.50 P
ATOM 3 OP1 U B 347 60.452 121.453 8.148 1.00 90.24 O
ATOM 4 OP2 U B 347 59.018 121.857 6.048 1.00 90.61 O
ATOM 5 O5' U B 347 58.305 120.220 7.745 1.00 90.05 O
ATOM 6 C5' U B 347 58.418 119.491 8.983 1.00 89.97 C
ATOM 7 C4' U B 347 57.081 118.894 9.357 1.00 89.39 C
ATOM 8 O4' U B 347 56.158 119.955 9.706 1.00 88.21 O
ATOM 9 C3' U B 347 56.380 118.129 8.246 1.00 89.82 C
ATOM 10 O3' U B 347 56.863 116.789 8.182 1.00 92.43 O
ATOM 11 C2' U B 347 54.916 118.198 8.666 1.00 88.56 C
ATOM 12 O2' U B 347 54.577 117.228 9.636 1.00 88.00 O
ATOM 13 C1' U B 347 54.846 119.587 9.313 1.00 88.10 C
ATOM 14 N1 U B 347 54.267 120.669 8.495 1.00 87.00 N
ATOM 15 C2 U B 347 52.935 120.557 8.122 1.00 86.67 C
ATOM 16 O2 U B 347 52.241 119.590 8.403 1.00 87.68 O
ATOM 17 N3 U B 347 52.444 121.621 7.406 1.00 86.46 N
ATOM 18 C4 U B 347 53.124 122.760 7.029 1.00 85.96 C
ATOM 19 O4 U B 347 52.529 123.640 6.400 1.00 84.71 O
ATOM 20 C5 U B 347 54.497 122.793 7.428 1.00 86.08 C
ATOM 21 C6 U B 347 55.010 121.774 8.125 1.00 86.45 C
ATOM 22 P A B 348 56.929 116.022 6.769 1.00 93.89 P
ATOM 23 OP1 A B 348 57.513 114.683 7.059 1.00 94.06 O
ATOM 24 OP2 A B 348 57.584 116.901 5.766 1.00 93.31 O
ATOM 25 O5' A B 348 55.399 115.839 6.355 1.00 92.12 O
TER
Atoms:
OP1: (53.254,130.320,-0.995)
OP2: (55.329,129.655,0.371)
C3': (51.586,126.495,1.901)
C1': (52.960,124.635,1.480)
C5': (52.148,127.586,-0.348)
O6: (58.267,124.870,4.270)
O4': (52.795,125.336,0.256)
C8: (54.978,126.141,1.828)
C2: (55.669,122.451,4.067)
C6: (57.188,124.374,3.932)
C5: (56.181,124.930,3.097)
C4: (55.045,124.188,2.842)
P: (54.186,129.272,-0.498)
C4': (51.745,126.332,0.396)
C2': (51.827,125.079,2.405)
O2': (50.717,124.225,2.222)
N1: (56.836,123.104,4.381)
N2: (55.509,121.238,4.599)
N3: (54.726,122.954,3.288)
N7: (56.123,126.159,2.452)
N9: (54.273,124.975,2.023)
O5': (53.326,128.164,0.258)
O3': (50.312,127.023,2.261)
OP2: (55.329,129.655,0.371)
C3': (51.586,126.495,1.901)
C1': (52.960,124.635,1.480)
C5': (52.148,127.586,-0.348)
O6: (58.267,124.870,4.270)
O4': (52.795,125.336,0.256)
C8: (54.978,126.141,1.828)
C2: (55.669,122.451,4.067)
C6: (57.188,124.374,3.932)
C5: (56.181,124.930,3.097)
C4: (55.045,124.188,2.842)
P: (54.186,129.272,-0.498)
C4': (51.745,126.332,0.396)
C2': (51.827,125.079,2.405)
O2': (50.717,124.225,2.222)
N1: (56.836,123.104,4.381)
N2: (55.509,121.238,4.599)
N3: (54.726,122.954,3.288)
N7: (56.123,126.159,2.452)
N9: (54.273,124.975,2.023)
O5': (53.326,128.164,0.258)
O3': (50.312,127.023,2.261)
C4: (53.124,122.760,7.029)
N3: (52.444,121.621,7.406)
OP1: (60.452,121.453,8.148)
OP2: (59.018,121.857,6.048)
C2: (52.935,120.557,8.122)
C1': (54.846,119.587,9.313)
C3': (56.380,118.129,8.246)
O5': (58.305,120.220,7.745)
O4': (56.158,119.955,9.706)
C5': (58.418,119.491,8.983)
P: (59.113,121.571,7.503)
C4': (57.081,118.894,9.357)
C2': (54.916,118.198,8.666)
O2': (54.577,117.228,9.636)
N1: (54.267,120.669,8.495)
O4: (52.529,123.640,6.400)
O2: (52.241,119.590,8.403)
C6: (55.010,121.774,8.125)
C5: (54.497,122.793,7.428)
O3': (56.863,116.789,8.182)
N3: (52.444,121.621,7.406)
OP1: (60.452,121.453,8.148)
OP2: (59.018,121.857,6.048)
C2: (52.935,120.557,8.122)
C1': (54.846,119.587,9.313)
C3': (56.380,118.129,8.246)
O5': (58.305,120.220,7.745)
O4': (56.158,119.955,9.706)
C5': (58.418,119.491,8.983)
P: (59.113,121.571,7.503)
C4': (57.081,118.894,9.357)
C2': (54.916,118.198,8.666)
O2': (54.577,117.228,9.636)
N1: (54.267,120.669,8.495)
O4: (52.529,123.640,6.400)
O2: (52.241,119.590,8.403)
C6: (55.010,121.774,8.125)
C5: (54.497,122.793,7.428)
O3': (56.863,116.789,8.182)
Image (generated by PyMOL):