Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A468:A458
Extra
PDB:
ATOM 1 O3' G A 467 -51.974 -64.283 34.915 1.00 0.01 O
ATOM 2 P G A 468 -51.955 -65.728 35.591 1.00 0.01 P
ATOM 3 OP1 G A 468 -53.136 -66.453 35.120 1.00 0.01 O
ATOM 4 OP2 G A 468 -51.773 -65.538 37.038 1.00 0.01 O
ATOM 5 O5' G A 468 -50.672 -66.365 34.959 1.00 0.01 O
ATOM 6 C5' G A 468 -50.722 -66.892 33.673 1.00 0.01 C
ATOM 7 C4' G A 468 -49.477 -67.634 33.358 1.00 0.01 C
ATOM 8 O4' G A 468 -48.372 -66.717 33.281 1.00 0.01 O
ATOM 9 C3' G A 468 -49.034 -68.627 34.387 1.00 0.01 C
ATOM 10 O3' G A 468 -49.767 -69.826 34.339 1.00 0.01 O
ATOM 11 C2' G A 468 -47.580 -68.773 34.033 1.00 0.01 C
ATOM 12 O2' G A 468 -47.444 -69.461 32.817 1.00 0.01 O
ATOM 13 C1' G A 468 -47.223 -67.322 33.792 1.00 0.01 C
ATOM 14 N9 G A 468 -46.891 -66.660 35.051 1.00 0.01 N
ATOM 15 C8 G A 468 -47.742 -66.027 35.905 1.00 0.01 C
ATOM 16 N7 G A 468 -47.164 -65.603 36.969 1.00 0.01 N
ATOM 17 C5 G A 468 -45.861 -65.998 36.814 1.00 0.01 C
ATOM 18 C6 G A 468 -44.758 -65.825 37.659 1.00 0.01 C
ATOM 19 O6 G A 468 -44.743 -65.276 38.747 1.00 0.01 O
ATOM 20 N1 G A 468 -43.615 -66.375 37.121 1.00 0.01 N
ATOM 21 C2 G A 468 -43.559 -67.028 35.922 1.00 0.01 C
ATOM 22 N2 G A 468 -42.380 -67.518 35.546 1.00 0.01 N
ATOM 23 N3 G A 468 -44.580 -67.218 35.126 1.00 0.01 N
ATOM 24 C4 G A 468 -45.679 -66.663 35.639 1.00 0.01 C
ATOM 25 P A A 469 -49.550 -70.939 35.457 1.00 0.01 P
ATOM 26 OP1 A A 469 -50.424 -72.060 35.120 1.00 0.01 O
ATOM 27 OP2 A A 469 -49.694 -70.302 36.773 1.00 0.01 O
ATOM 28 O5' A A 469 -48.067 -71.345 35.214 1.00 0.01 O
TER
ATOM 1 O3' G B 457 -40.910 -67.160 39.773 1.00 0.01 O
ATOM 2 P U B 458 -39.993 -66.054 39.121 1.00 0.01 P
ATOM 3 OP1 U B 458 -39.200 -65.471 40.181 1.00 0.01 O
ATOM 4 OP2 U B 458 -40.846 -65.176 38.318 1.00 0.01 O
ATOM 5 O5' U B 458 -39.066 -66.913 38.184 1.00 0.01 O
ATOM 6 C5' U B 458 -37.917 -67.540 38.707 1.00 0.01 C
ATOM 7 C4' U B 458 -37.551 -68.771 37.931 1.00 0.01 C
ATOM 8 O4' U B 458 -38.483 -69.825 38.221 1.00 0.01 O
ATOM 9 C3' U B 458 -37.574 -68.643 36.429 1.00 0.01 C
ATOM 10 O3' U B 458 -36.376 -68.090 35.940 1.00 0.01 O
ATOM 11 C2' U B 458 -37.800 -70.079 35.978 1.00 0.01 C
ATOM 12 O2' U B 458 -36.580 -70.810 35.963 1.00 0.01 O
ATOM 13 C1' U B 458 -38.653 -70.634 37.102 1.00 0.01 C
ATOM 14 N1 U B 458 -40.071 -70.673 36.781 1.00 0.01 N
ATOM 15 C2 U B 458 -40.485 -71.515 35.778 1.00 0.01 C
ATOM 16 O2 U B 458 -39.710 -72.172 35.092 1.00 0.01 O
ATOM 17 N3 U B 458 -41.834 -71.507 35.613 1.00 0.01 N
ATOM 18 C4 U B 458 -42.720 -70.785 36.356 1.00 0.01 C
ATOM 19 O4 U B 458 -43.888 -70.876 36.097 1.00 0.01 O
ATOM 20 C5 U B 458 -42.220 -69.968 37.382 1.00 0.01 C
ATOM 21 C6 U B 458 -40.925 -69.953 37.560 1.00 0.01 C
ATOM 22 P A B 459 -36.384 -66.929 34.843 1.00 0.01 P
ATOM 23 OP1 A B 459 -35.010 -66.440 34.741 1.00 0.01 O
ATOM 24 OP2 A B 459 -37.452 -65.962 35.206 1.00 0.01 O
ATOM 25 O5' A B 459 -36.758 -67.715 33.529 1.00 0.01 O
TER
ATOM 2 P G A 468 -51.955 -65.728 35.591 1.00 0.01 P
ATOM 3 OP1 G A 468 -53.136 -66.453 35.120 1.00 0.01 O
ATOM 4 OP2 G A 468 -51.773 -65.538 37.038 1.00 0.01 O
ATOM 5 O5' G A 468 -50.672 -66.365 34.959 1.00 0.01 O
ATOM 6 C5' G A 468 -50.722 -66.892 33.673 1.00 0.01 C
ATOM 7 C4' G A 468 -49.477 -67.634 33.358 1.00 0.01 C
ATOM 8 O4' G A 468 -48.372 -66.717 33.281 1.00 0.01 O
ATOM 9 C3' G A 468 -49.034 -68.627 34.387 1.00 0.01 C
ATOM 10 O3' G A 468 -49.767 -69.826 34.339 1.00 0.01 O
ATOM 11 C2' G A 468 -47.580 -68.773 34.033 1.00 0.01 C
ATOM 12 O2' G A 468 -47.444 -69.461 32.817 1.00 0.01 O
ATOM 13 C1' G A 468 -47.223 -67.322 33.792 1.00 0.01 C
ATOM 14 N9 G A 468 -46.891 -66.660 35.051 1.00 0.01 N
ATOM 15 C8 G A 468 -47.742 -66.027 35.905 1.00 0.01 C
ATOM 16 N7 G A 468 -47.164 -65.603 36.969 1.00 0.01 N
ATOM 17 C5 G A 468 -45.861 -65.998 36.814 1.00 0.01 C
ATOM 18 C6 G A 468 -44.758 -65.825 37.659 1.00 0.01 C
ATOM 19 O6 G A 468 -44.743 -65.276 38.747 1.00 0.01 O
ATOM 20 N1 G A 468 -43.615 -66.375 37.121 1.00 0.01 N
ATOM 21 C2 G A 468 -43.559 -67.028 35.922 1.00 0.01 C
ATOM 22 N2 G A 468 -42.380 -67.518 35.546 1.00 0.01 N
ATOM 23 N3 G A 468 -44.580 -67.218 35.126 1.00 0.01 N
ATOM 24 C4 G A 468 -45.679 -66.663 35.639 1.00 0.01 C
ATOM 25 P A A 469 -49.550 -70.939 35.457 1.00 0.01 P
ATOM 26 OP1 A A 469 -50.424 -72.060 35.120 1.00 0.01 O
ATOM 27 OP2 A A 469 -49.694 -70.302 36.773 1.00 0.01 O
ATOM 28 O5' A A 469 -48.067 -71.345 35.214 1.00 0.01 O
TER
ATOM 1 O3' G B 457 -40.910 -67.160 39.773 1.00 0.01 O
ATOM 2 P U B 458 -39.993 -66.054 39.121 1.00 0.01 P
ATOM 3 OP1 U B 458 -39.200 -65.471 40.181 1.00 0.01 O
ATOM 4 OP2 U B 458 -40.846 -65.176 38.318 1.00 0.01 O
ATOM 5 O5' U B 458 -39.066 -66.913 38.184 1.00 0.01 O
ATOM 6 C5' U B 458 -37.917 -67.540 38.707 1.00 0.01 C
ATOM 7 C4' U B 458 -37.551 -68.771 37.931 1.00 0.01 C
ATOM 8 O4' U B 458 -38.483 -69.825 38.221 1.00 0.01 O
ATOM 9 C3' U B 458 -37.574 -68.643 36.429 1.00 0.01 C
ATOM 10 O3' U B 458 -36.376 -68.090 35.940 1.00 0.01 O
ATOM 11 C2' U B 458 -37.800 -70.079 35.978 1.00 0.01 C
ATOM 12 O2' U B 458 -36.580 -70.810 35.963 1.00 0.01 O
ATOM 13 C1' U B 458 -38.653 -70.634 37.102 1.00 0.01 C
ATOM 14 N1 U B 458 -40.071 -70.673 36.781 1.00 0.01 N
ATOM 15 C2 U B 458 -40.485 -71.515 35.778 1.00 0.01 C
ATOM 16 O2 U B 458 -39.710 -72.172 35.092 1.00 0.01 O
ATOM 17 N3 U B 458 -41.834 -71.507 35.613 1.00 0.01 N
ATOM 18 C4 U B 458 -42.720 -70.785 36.356 1.00 0.01 C
ATOM 19 O4 U B 458 -43.888 -70.876 36.097 1.00 0.01 O
ATOM 20 C5 U B 458 -42.220 -69.968 37.382 1.00 0.01 C
ATOM 21 C6 U B 458 -40.925 -69.953 37.560 1.00 0.01 C
ATOM 22 P A B 459 -36.384 -66.929 34.843 1.00 0.01 P
ATOM 23 OP1 A B 459 -35.010 -66.440 34.741 1.00 0.01 O
ATOM 24 OP2 A B 459 -37.452 -65.962 35.206 1.00 0.01 O
ATOM 25 O5' A B 459 -36.758 -67.715 33.529 1.00 0.01 O
TER
Atoms:
OP1: (-53.136,-66.453,35.120)
OP2: (-51.773,-65.538,37.038)
C3': (-49.034,-68.627,34.387)
C1': (-47.223,-67.322,33.792)
C5': (-50.722,-66.892,33.673)
O6: (-44.743,-65.276,38.747)
O4': (-48.372,-66.717,33.281)
C8: (-47.742,-66.027,35.905)
C2: (-43.559,-67.028,35.922)
C6: (-44.758,-65.825,37.659)
C5: (-45.861,-65.998,36.814)
C4: (-45.679,-66.663,35.639)
P: (-51.955,-65.728,35.591)
C4': (-49.477,-67.634,33.358)
C2': (-47.580,-68.773,34.033)
O2': (-47.444,-69.461,32.817)
N1: (-43.615,-66.375,37.121)
N2: (-42.380,-67.518,35.546)
N3: (-44.580,-67.218,35.126)
N7: (-47.164,-65.603,36.969)
N9: (-46.891,-66.660,35.051)
O5': (-50.672,-66.365,34.959)
O3': (-49.767,-69.826,34.339)
OP2: (-51.773,-65.538,37.038)
C3': (-49.034,-68.627,34.387)
C1': (-47.223,-67.322,33.792)
C5': (-50.722,-66.892,33.673)
O6: (-44.743,-65.276,38.747)
O4': (-48.372,-66.717,33.281)
C8: (-47.742,-66.027,35.905)
C2: (-43.559,-67.028,35.922)
C6: (-44.758,-65.825,37.659)
C5: (-45.861,-65.998,36.814)
C4: (-45.679,-66.663,35.639)
P: (-51.955,-65.728,35.591)
C4': (-49.477,-67.634,33.358)
C2': (-47.580,-68.773,34.033)
O2': (-47.444,-69.461,32.817)
N1: (-43.615,-66.375,37.121)
N2: (-42.380,-67.518,35.546)
N3: (-44.580,-67.218,35.126)
N7: (-47.164,-65.603,36.969)
N9: (-46.891,-66.660,35.051)
O5': (-50.672,-66.365,34.959)
O3': (-49.767,-69.826,34.339)
C4: (-42.720,-70.785,36.356)
N3: (-41.834,-71.507,35.613)
OP1: (-39.200,-65.471,40.181)
OP2: (-40.846,-65.176,38.318)
C2: (-40.485,-71.515,35.778)
C1': (-38.653,-70.634,37.102)
C3': (-37.574,-68.643,36.429)
O5': (-39.066,-66.913,38.184)
O4': (-38.483,-69.825,38.221)
C5': (-37.917,-67.540,38.707)
P: (-39.993,-66.054,39.121)
C4': (-37.551,-68.771,37.931)
C2': (-37.800,-70.079,35.978)
O2': (-36.580,-70.810,35.963)
N1: (-40.071,-70.673,36.781)
O4: (-43.888,-70.876,36.097)
O2: (-39.710,-72.172,35.092)
C6: (-40.925,-69.953,37.560)
C5: (-42.220,-69.968,37.382)
O3': (-36.376,-68.090,35.940)
N3: (-41.834,-71.507,35.613)
OP1: (-39.200,-65.471,40.181)
OP2: (-40.846,-65.176,38.318)
C2: (-40.485,-71.515,35.778)
C1': (-38.653,-70.634,37.102)
C3': (-37.574,-68.643,36.429)
O5': (-39.066,-66.913,38.184)
O4': (-38.483,-69.825,38.221)
C5': (-37.917,-67.540,38.707)
P: (-39.993,-66.054,39.121)
C4': (-37.551,-68.771,37.931)
C2': (-37.800,-70.079,35.978)
O2': (-36.580,-70.810,35.963)
N1: (-40.071,-70.673,36.781)
O4: (-43.888,-70.876,36.097)
O2: (-39.710,-72.172,35.092)
C6: (-40.925,-69.953,37.560)
C5: (-42.220,-69.968,37.382)
O3': (-36.376,-68.090,35.940)
Image (generated by PyMOL):