Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ8:0280:0347
Extra
PDB:
ATOM 1 O3' C A 279 54.405 127.865 -1.879 1.00 71.90 O
ATOM 2 P G A 280 53.883 128.747 -0.640 1.00 72.02 P
ATOM 3 OP1 G A 280 53.017 129.818 -1.205 1.00 71.67 O
ATOM 4 OP2 G A 280 55.061 129.114 0.194 1.00 70.85 O
ATOM 5 O5' G A 280 52.959 127.749 0.189 1.00 71.98 O
ATOM 6 C5' G A 280 51.833 127.084 -0.429 1.00 72.48 C
ATOM 7 C4' G A 280 51.509 125.808 0.316 1.00 73.07 C
ATOM 8 O4' G A 280 52.616 124.875 0.183 1.00 73.18 O
ATOM 9 C3' G A 280 51.341 125.962 1.820 1.00 73.76 C
ATOM 10 O3' G A 280 50.047 126.428 2.180 1.00 75.42 O
ATOM 11 C2' G A 280 51.648 124.560 2.326 1.00 72.48 C
ATOM 12 O2' G A 280 50.583 123.651 2.141 1.00 71.78 O
ATOM 13 C1' G A 280 52.803 124.171 1.403 1.00 71.89 C
ATOM 14 N9 G A 280 54.099 124.554 1.955 1.00 70.70 N
ATOM 15 C8 G A 280 54.780 125.735 1.753 1.00 70.52 C
ATOM 16 N7 G A 280 55.929 125.779 2.373 1.00 69.67 N
ATOM 17 C5 G A 280 56.011 124.555 3.027 1.00 70.43 C
ATOM 18 C6 G A 280 57.036 124.017 3.854 1.00 70.27 C
ATOM 19 O6 G A 280 58.117 124.529 4.173 1.00 70.85 O
ATOM 20 N1 G A 280 56.705 122.745 4.316 1.00 69.25 N
ATOM 21 C2 G A 280 55.545 122.072 4.015 1.00 68.36 C
ATOM 22 N2 G A 280 55.410 120.858 4.550 1.00 67.34 N
ATOM 23 N3 G A 280 54.588 122.556 3.243 1.00 69.08 N
ATOM 24 C4 G A 280 54.884 123.793 2.785 1.00 70.46 C
ATOM 25 P A A 281 49.858 127.275 3.535 1.00 77.33 P
ATOM 26 OP1 A A 281 48.533 127.959 3.428 1.00 75.87 O
ATOM 27 OP2 A A 281 51.092 128.086 3.769 1.00 75.63 O
ATOM 28 O5' A A 281 49.780 126.150 4.664 1.00 75.04 O
TER
ATOM 1 O3' G B 346 58.043 122.279 8.146 1.00 79.57 O
ATOM 2 P U B 347 59.022 121.165 7.515 1.00 80.35 P
ATOM 3 OP1 U B 347 60.317 121.155 8.256 1.00 79.87 O
ATOM 4 OP2 U B 347 59.022 121.352 6.039 1.00 79.70 O
ATOM 5 O5' U B 347 58.252 119.798 7.794 1.00 78.89 O
ATOM 6 C5' U B 347 58.242 119.192 9.103 1.00 77.82 C
ATOM 7 C4' U B 347 56.878 118.612 9.399 1.00 77.27 C
ATOM 8 O4' U B 347 55.928 119.684 9.623 1.00 75.63 O
ATOM 9 C3' U B 347 56.254 117.796 8.278 1.00 77.88 C
ATOM 10 O3' U B 347 56.758 116.462 8.274 1.00 81.42 O
ATOM 11 C2' U B 347 54.766 117.853 8.612 1.00 76.34 C
ATOM 12 O2' U B 347 54.376 116.903 9.584 1.00 75.57 O
ATOM 13 C1' U B 347 54.638 119.261 9.208 1.00 75.18 C
ATOM 14 N1 U B 347 54.041 120.294 8.342 1.00 73.53 N
ATOM 15 C2 U B 347 52.736 120.096 7.905 1.00 73.35 C
ATOM 16 O2 U B 347 52.090 119.089 8.168 1.00 74.12 O
ATOM 17 N3 U B 347 52.216 121.117 7.147 1.00 72.96 N
ATOM 18 C4 U B 347 52.845 122.290 6.779 1.00 72.13 C
ATOM 19 O4 U B 347 52.217 123.139 6.136 1.00 69.96 O
ATOM 20 C5 U B 347 54.196 122.413 7.246 1.00 72.23 C
ATOM 21 C6 U B 347 54.735 121.437 7.988 1.00 72.17 C
ATOM 22 P A B 348 56.935 115.672 6.881 1.00 83.98 P
ATOM 23 OP1 A B 348 57.593 114.375 7.218 1.00 82.92 O
ATOM 24 OP2 A B 348 57.577 116.581 5.889 1.00 82.70 O
ATOM 25 O5' A B 348 55.437 115.390 6.409 1.00 81.11 O
TER
ATOM 2 P G A 280 53.883 128.747 -0.640 1.00 72.02 P
ATOM 3 OP1 G A 280 53.017 129.818 -1.205 1.00 71.67 O
ATOM 4 OP2 G A 280 55.061 129.114 0.194 1.00 70.85 O
ATOM 5 O5' G A 280 52.959 127.749 0.189 1.00 71.98 O
ATOM 6 C5' G A 280 51.833 127.084 -0.429 1.00 72.48 C
ATOM 7 C4' G A 280 51.509 125.808 0.316 1.00 73.07 C
ATOM 8 O4' G A 280 52.616 124.875 0.183 1.00 73.18 O
ATOM 9 C3' G A 280 51.341 125.962 1.820 1.00 73.76 C
ATOM 10 O3' G A 280 50.047 126.428 2.180 1.00 75.42 O
ATOM 11 C2' G A 280 51.648 124.560 2.326 1.00 72.48 C
ATOM 12 O2' G A 280 50.583 123.651 2.141 1.00 71.78 O
ATOM 13 C1' G A 280 52.803 124.171 1.403 1.00 71.89 C
ATOM 14 N9 G A 280 54.099 124.554 1.955 1.00 70.70 N
ATOM 15 C8 G A 280 54.780 125.735 1.753 1.00 70.52 C
ATOM 16 N7 G A 280 55.929 125.779 2.373 1.00 69.67 N
ATOM 17 C5 G A 280 56.011 124.555 3.027 1.00 70.43 C
ATOM 18 C6 G A 280 57.036 124.017 3.854 1.00 70.27 C
ATOM 19 O6 G A 280 58.117 124.529 4.173 1.00 70.85 O
ATOM 20 N1 G A 280 56.705 122.745 4.316 1.00 69.25 N
ATOM 21 C2 G A 280 55.545 122.072 4.015 1.00 68.36 C
ATOM 22 N2 G A 280 55.410 120.858 4.550 1.00 67.34 N
ATOM 23 N3 G A 280 54.588 122.556 3.243 1.00 69.08 N
ATOM 24 C4 G A 280 54.884 123.793 2.785 1.00 70.46 C
ATOM 25 P A A 281 49.858 127.275 3.535 1.00 77.33 P
ATOM 26 OP1 A A 281 48.533 127.959 3.428 1.00 75.87 O
ATOM 27 OP2 A A 281 51.092 128.086 3.769 1.00 75.63 O
ATOM 28 O5' A A 281 49.780 126.150 4.664 1.00 75.04 O
TER
ATOM 1 O3' G B 346 58.043 122.279 8.146 1.00 79.57 O
ATOM 2 P U B 347 59.022 121.165 7.515 1.00 80.35 P
ATOM 3 OP1 U B 347 60.317 121.155 8.256 1.00 79.87 O
ATOM 4 OP2 U B 347 59.022 121.352 6.039 1.00 79.70 O
ATOM 5 O5' U B 347 58.252 119.798 7.794 1.00 78.89 O
ATOM 6 C5' U B 347 58.242 119.192 9.103 1.00 77.82 C
ATOM 7 C4' U B 347 56.878 118.612 9.399 1.00 77.27 C
ATOM 8 O4' U B 347 55.928 119.684 9.623 1.00 75.63 O
ATOM 9 C3' U B 347 56.254 117.796 8.278 1.00 77.88 C
ATOM 10 O3' U B 347 56.758 116.462 8.274 1.00 81.42 O
ATOM 11 C2' U B 347 54.766 117.853 8.612 1.00 76.34 C
ATOM 12 O2' U B 347 54.376 116.903 9.584 1.00 75.57 O
ATOM 13 C1' U B 347 54.638 119.261 9.208 1.00 75.18 C
ATOM 14 N1 U B 347 54.041 120.294 8.342 1.00 73.53 N
ATOM 15 C2 U B 347 52.736 120.096 7.905 1.00 73.35 C
ATOM 16 O2 U B 347 52.090 119.089 8.168 1.00 74.12 O
ATOM 17 N3 U B 347 52.216 121.117 7.147 1.00 72.96 N
ATOM 18 C4 U B 347 52.845 122.290 6.779 1.00 72.13 C
ATOM 19 O4 U B 347 52.217 123.139 6.136 1.00 69.96 O
ATOM 20 C5 U B 347 54.196 122.413 7.246 1.00 72.23 C
ATOM 21 C6 U B 347 54.735 121.437 7.988 1.00 72.17 C
ATOM 22 P A B 348 56.935 115.672 6.881 1.00 83.98 P
ATOM 23 OP1 A B 348 57.593 114.375 7.218 1.00 82.92 O
ATOM 24 OP2 A B 348 57.577 116.581 5.889 1.00 82.70 O
ATOM 25 O5' A B 348 55.437 115.390 6.409 1.00 81.11 O
TER
Atoms:
OP1: (53.017,129.818,-1.205)
OP2: (55.061,129.114,0.194)
C3': (51.341,125.962,1.820)
C1': (52.803,124.171,1.403)
C5': (51.833,127.084,-0.429)
O6: (58.117,124.529,4.173)
O4': (52.616,124.875,0.183)
C8: (54.780,125.735,1.753)
C2: (55.545,122.072,4.015)
C6: (57.036,124.017,3.854)
C5: (56.011,124.555,3.027)
C4: (54.884,123.793,2.785)
P: (53.883,128.747,-0.640)
C4': (51.509,125.808,0.316)
C2': (51.648,124.560,2.326)
O2': (50.583,123.651,2.141)
N1: (56.705,122.745,4.316)
N2: (55.410,120.858,4.550)
N3: (54.588,122.556,3.243)
N7: (55.929,125.779,2.373)
N9: (54.099,124.554,1.955)
O5': (52.959,127.749,0.189)
O3': (50.047,126.428,2.180)
OP2: (55.061,129.114,0.194)
C3': (51.341,125.962,1.820)
C1': (52.803,124.171,1.403)
C5': (51.833,127.084,-0.429)
O6: (58.117,124.529,4.173)
O4': (52.616,124.875,0.183)
C8: (54.780,125.735,1.753)
C2: (55.545,122.072,4.015)
C6: (57.036,124.017,3.854)
C5: (56.011,124.555,3.027)
C4: (54.884,123.793,2.785)
P: (53.883,128.747,-0.640)
C4': (51.509,125.808,0.316)
C2': (51.648,124.560,2.326)
O2': (50.583,123.651,2.141)
N1: (56.705,122.745,4.316)
N2: (55.410,120.858,4.550)
N3: (54.588,122.556,3.243)
N7: (55.929,125.779,2.373)
N9: (54.099,124.554,1.955)
O5': (52.959,127.749,0.189)
O3': (50.047,126.428,2.180)
C4: (52.845,122.290,6.779)
N3: (52.216,121.117,7.147)
OP1: (60.317,121.155,8.256)
OP2: (59.022,121.352,6.039)
C2: (52.736,120.096,7.905)
C1': (54.638,119.261,9.208)
C3': (56.254,117.796,8.278)
O5': (58.252,119.798,7.794)
O4': (55.928,119.684,9.623)
C5': (58.242,119.192,9.103)
P: (59.022,121.165,7.515)
C4': (56.878,118.612,9.399)
C2': (54.766,117.853,8.612)
O2': (54.376,116.903,9.584)
N1: (54.041,120.294,8.342)
O4: (52.217,123.139,6.136)
O2: (52.090,119.089,8.168)
C6: (54.735,121.437,7.988)
C5: (54.196,122.413,7.246)
O3': (56.758,116.462,8.274)
N3: (52.216,121.117,7.147)
OP1: (60.317,121.155,8.256)
OP2: (59.022,121.352,6.039)
C2: (52.736,120.096,7.905)
C1': (54.638,119.261,9.208)
C3': (56.254,117.796,8.278)
O5': (58.252,119.798,7.794)
O4': (55.928,119.684,9.623)
C5': (58.242,119.192,9.103)
P: (59.022,121.165,7.515)
C4': (56.878,118.612,9.399)
C2': (54.766,117.853,8.612)
O2': (54.376,116.903,9.584)
N1: (54.041,120.294,8.342)
O4: (52.217,123.139,6.136)
O2: (52.090,119.089,8.168)
C6: (54.735,121.437,7.988)
C5: (54.196,122.413,7.246)
O3': (56.758,116.462,8.274)
Image (generated by PyMOL):