Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ9:0280:0347
Extra
PDB:
ATOM 1 O3' C A 279 54.416 127.754 -1.929 1.00 75.37 O
ATOM 2 P G A 280 53.883 128.646 -0.698 1.00 75.15 P
ATOM 3 OP1 G A 280 52.990 129.693 -1.266 1.00 74.68 O
ATOM 4 OP2 G A 280 55.063 129.047 0.119 1.00 74.70 O
ATOM 5 O5' G A 280 52.979 127.650 0.159 1.00 74.62 O
ATOM 6 C5' G A 280 51.783 127.054 -0.397 1.00 73.93 C
ATOM 7 C4' G A 280 51.452 125.768 0.332 1.00 73.69 C
ATOM 8 O4' G A 280 52.531 124.812 0.132 1.00 73.31 O
ATOM 9 C3' G A 280 51.339 125.881 1.847 1.00 73.58 C
ATOM 10 O3' G A 280 50.069 126.360 2.274 1.00 75.75 O
ATOM 11 C2' G A 280 51.641 124.459 2.297 1.00 71.81 C
ATOM 12 O2' G A 280 50.565 123.565 2.097 1.00 69.69 O
ATOM 13 C1' G A 280 52.772 124.097 1.336 1.00 71.41 C
ATOM 14 N9 G A 280 54.075 124.509 1.852 1.00 70.22 N
ATOM 15 C8 G A 280 54.742 125.688 1.595 1.00 70.02 C
ATOM 16 N7 G A 280 55.901 125.764 2.192 1.00 69.54 N
ATOM 17 C5 G A 280 56.008 124.565 2.888 1.00 70.13 C
ATOM 18 C6 G A 280 57.056 124.067 3.715 1.00 69.90 C
ATOM 19 O6 G A 280 58.138 124.600 3.995 1.00 70.35 O
ATOM 20 N1 G A 280 56.747 122.807 4.228 1.00 68.97 N
ATOM 21 C2 G A 280 55.588 122.111 3.971 1.00 68.36 C
ATOM 22 N2 G A 280 55.482 120.911 4.546 1.00 67.19 N
ATOM 23 N3 G A 280 54.609 122.559 3.201 1.00 68.41 N
ATOM 24 C4 G A 280 54.884 123.783 2.694 1.00 70.02 C
ATOM 25 P A A 281 49.961 127.233 3.625 1.00 77.71 P
ATOM 26 OP1 A A 281 48.635 127.920 3.587 1.00 76.68 O
ATOM 27 OP2 A A 281 51.207 128.046 3.778 1.00 76.40 O
ATOM 28 O5' A A 281 49.936 126.130 4.777 1.00 74.99 O
TER
ATOM 1 O3' G B 346 58.123 122.221 8.115 1.00 83.83 O
ATOM 2 P U B 347 59.122 121.101 7.528 1.00 84.15 P
ATOM 3 OP1 U B 347 60.389 121.098 8.317 1.00 83.74 O
ATOM 4 OP2 U B 347 59.173 121.282 6.051 1.00 83.41 O
ATOM 5 O5' U B 347 58.349 119.732 7.788 1.00 82.73 O
ATOM 6 C5' U B 347 58.297 119.134 9.099 1.00 81.54 C
ATOM 7 C4' U B 347 56.905 118.618 9.381 1.00 80.56 C
ATOM 8 O4' U B 347 56.002 119.739 9.536 1.00 79.72 O
ATOM 9 C3' U B 347 56.270 117.807 8.262 1.00 81.18 C
ATOM 10 O3' U B 347 56.716 116.456 8.291 1.00 84.04 O
ATOM 11 C2' U B 347 54.780 117.922 8.570 1.00 79.81 C
ATOM 12 O2' U B 347 54.336 116.993 9.539 1.00 78.70 O
ATOM 13 C1' U B 347 54.695 119.339 9.153 1.00 78.85 C
ATOM 14 N1 U B 347 54.094 120.379 8.297 1.00 77.14 N
ATOM 15 C2 U B 347 52.815 120.148 7.812 1.00 76.83 C
ATOM 16 O2 U B 347 52.195 119.113 8.032 1.00 76.49 O
ATOM 17 N3 U B 347 52.285 121.173 7.062 1.00 76.64 N
ATOM 18 C4 U B 347 52.884 122.379 6.749 1.00 76.09 C
ATOM 19 O4 U B 347 52.262 123.208 6.075 1.00 73.99 O
ATOM 20 C5 U B 347 54.213 122.536 7.267 1.00 75.89 C
ATOM 21 C6 U B 347 54.761 121.556 8.000 1.00 75.98 C
ATOM 22 P A B 348 57.020 115.682 6.912 1.00 86.58 P
ATOM 23 OP1 A B 348 57.713 114.412 7.298 1.00 85.76 O
ATOM 24 OP2 A B 348 57.684 116.618 5.958 1.00 85.17 O
ATOM 25 O5' A B 348 55.570 115.341 6.342 1.00 83.91 O
TER
ATOM 2 P G A 280 53.883 128.646 -0.698 1.00 75.15 P
ATOM 3 OP1 G A 280 52.990 129.693 -1.266 1.00 74.68 O
ATOM 4 OP2 G A 280 55.063 129.047 0.119 1.00 74.70 O
ATOM 5 O5' G A 280 52.979 127.650 0.159 1.00 74.62 O
ATOM 6 C5' G A 280 51.783 127.054 -0.397 1.00 73.93 C
ATOM 7 C4' G A 280 51.452 125.768 0.332 1.00 73.69 C
ATOM 8 O4' G A 280 52.531 124.812 0.132 1.00 73.31 O
ATOM 9 C3' G A 280 51.339 125.881 1.847 1.00 73.58 C
ATOM 10 O3' G A 280 50.069 126.360 2.274 1.00 75.75 O
ATOM 11 C2' G A 280 51.641 124.459 2.297 1.00 71.81 C
ATOM 12 O2' G A 280 50.565 123.565 2.097 1.00 69.69 O
ATOM 13 C1' G A 280 52.772 124.097 1.336 1.00 71.41 C
ATOM 14 N9 G A 280 54.075 124.509 1.852 1.00 70.22 N
ATOM 15 C8 G A 280 54.742 125.688 1.595 1.00 70.02 C
ATOM 16 N7 G A 280 55.901 125.764 2.192 1.00 69.54 N
ATOM 17 C5 G A 280 56.008 124.565 2.888 1.00 70.13 C
ATOM 18 C6 G A 280 57.056 124.067 3.715 1.00 69.90 C
ATOM 19 O6 G A 280 58.138 124.600 3.995 1.00 70.35 O
ATOM 20 N1 G A 280 56.747 122.807 4.228 1.00 68.97 N
ATOM 21 C2 G A 280 55.588 122.111 3.971 1.00 68.36 C
ATOM 22 N2 G A 280 55.482 120.911 4.546 1.00 67.19 N
ATOM 23 N3 G A 280 54.609 122.559 3.201 1.00 68.41 N
ATOM 24 C4 G A 280 54.884 123.783 2.694 1.00 70.02 C
ATOM 25 P A A 281 49.961 127.233 3.625 1.00 77.71 P
ATOM 26 OP1 A A 281 48.635 127.920 3.587 1.00 76.68 O
ATOM 27 OP2 A A 281 51.207 128.046 3.778 1.00 76.40 O
ATOM 28 O5' A A 281 49.936 126.130 4.777 1.00 74.99 O
TER
ATOM 1 O3' G B 346 58.123 122.221 8.115 1.00 83.83 O
ATOM 2 P U B 347 59.122 121.101 7.528 1.00 84.15 P
ATOM 3 OP1 U B 347 60.389 121.098 8.317 1.00 83.74 O
ATOM 4 OP2 U B 347 59.173 121.282 6.051 1.00 83.41 O
ATOM 5 O5' U B 347 58.349 119.732 7.788 1.00 82.73 O
ATOM 6 C5' U B 347 58.297 119.134 9.099 1.00 81.54 C
ATOM 7 C4' U B 347 56.905 118.618 9.381 1.00 80.56 C
ATOM 8 O4' U B 347 56.002 119.739 9.536 1.00 79.72 O
ATOM 9 C3' U B 347 56.270 117.807 8.262 1.00 81.18 C
ATOM 10 O3' U B 347 56.716 116.456 8.291 1.00 84.04 O
ATOM 11 C2' U B 347 54.780 117.922 8.570 1.00 79.81 C
ATOM 12 O2' U B 347 54.336 116.993 9.539 1.00 78.70 O
ATOM 13 C1' U B 347 54.695 119.339 9.153 1.00 78.85 C
ATOM 14 N1 U B 347 54.094 120.379 8.297 1.00 77.14 N
ATOM 15 C2 U B 347 52.815 120.148 7.812 1.00 76.83 C
ATOM 16 O2 U B 347 52.195 119.113 8.032 1.00 76.49 O
ATOM 17 N3 U B 347 52.285 121.173 7.062 1.00 76.64 N
ATOM 18 C4 U B 347 52.884 122.379 6.749 1.00 76.09 C
ATOM 19 O4 U B 347 52.262 123.208 6.075 1.00 73.99 O
ATOM 20 C5 U B 347 54.213 122.536 7.267 1.00 75.89 C
ATOM 21 C6 U B 347 54.761 121.556 8.000 1.00 75.98 C
ATOM 22 P A B 348 57.020 115.682 6.912 1.00 86.58 P
ATOM 23 OP1 A B 348 57.713 114.412 7.298 1.00 85.76 O
ATOM 24 OP2 A B 348 57.684 116.618 5.958 1.00 85.17 O
ATOM 25 O5' A B 348 55.570 115.341 6.342 1.00 83.91 O
TER
Atoms:
OP1: (52.990,129.693,-1.266)
OP2: (55.063,129.047,0.119)
C3': (51.339,125.881,1.847)
C1': (52.772,124.097,1.336)
C5': (51.783,127.054,-0.397)
O6: (58.138,124.600,3.995)
O4': (52.531,124.812,0.132)
C8: (54.742,125.688,1.595)
C2: (55.588,122.111,3.971)
C6: (57.056,124.067,3.715)
C5: (56.008,124.565,2.888)
C4: (54.884,123.783,2.694)
P: (53.883,128.646,-0.698)
C4': (51.452,125.768,0.332)
C2': (51.641,124.459,2.297)
O2': (50.565,123.565,2.097)
N1: (56.747,122.807,4.228)
N2: (55.482,120.911,4.546)
N3: (54.609,122.559,3.201)
N7: (55.901,125.764,2.192)
N9: (54.075,124.509,1.852)
O5': (52.979,127.650,0.159)
O3': (50.069,126.360,2.274)
OP2: (55.063,129.047,0.119)
C3': (51.339,125.881,1.847)
C1': (52.772,124.097,1.336)
C5': (51.783,127.054,-0.397)
O6: (58.138,124.600,3.995)
O4': (52.531,124.812,0.132)
C8: (54.742,125.688,1.595)
C2: (55.588,122.111,3.971)
C6: (57.056,124.067,3.715)
C5: (56.008,124.565,2.888)
C4: (54.884,123.783,2.694)
P: (53.883,128.646,-0.698)
C4': (51.452,125.768,0.332)
C2': (51.641,124.459,2.297)
O2': (50.565,123.565,2.097)
N1: (56.747,122.807,4.228)
N2: (55.482,120.911,4.546)
N3: (54.609,122.559,3.201)
N7: (55.901,125.764,2.192)
N9: (54.075,124.509,1.852)
O5': (52.979,127.650,0.159)
O3': (50.069,126.360,2.274)
C4: (52.884,122.379,6.749)
N3: (52.285,121.173,7.062)
OP1: (60.389,121.098,8.317)
OP2: (59.173,121.282,6.051)
C2: (52.815,120.148,7.812)
C1': (54.695,119.339,9.153)
C3': (56.270,117.807,8.262)
O5': (58.349,119.732,7.788)
O4': (56.002,119.739,9.536)
C5': (58.297,119.134,9.099)
P: (59.122,121.101,7.528)
C4': (56.905,118.618,9.381)
C2': (54.780,117.922,8.570)
O2': (54.336,116.993,9.539)
N1: (54.094,120.379,8.297)
O4: (52.262,123.208,6.075)
O2: (52.195,119.113,8.032)
C6: (54.761,121.556,8.000)
C5: (54.213,122.536,7.267)
O3': (56.716,116.456,8.291)
N3: (52.285,121.173,7.062)
OP1: (60.389,121.098,8.317)
OP2: (59.173,121.282,6.051)
C2: (52.815,120.148,7.812)
C1': (54.695,119.339,9.153)
C3': (56.270,117.807,8.262)
O5': (58.349,119.732,7.788)
O4': (56.002,119.739,9.536)
C5': (58.297,119.134,9.099)
P: (59.122,121.101,7.528)
C4': (56.905,118.618,9.381)
C2': (54.780,117.922,8.570)
O2': (54.336,116.993,9.539)
N1: (54.094,120.379,8.297)
O4: (52.262,123.208,6.075)
O2: (52.195,119.113,8.032)
C6: (54.761,121.556,8.000)
C5: (54.213,122.536,7.267)
O3': (56.716,116.456,8.291)
Image (generated by PyMOL):