Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2X:B58:B12
Extra
PDB:
ATOM 1 O3' A A 57 4.436 -25.832 26.907 1.00 24.07 O
ATOM 2 P U A 58 4.857 -24.639 25.926 1.00 24.62 P
ATOM 3 OP1 U A 58 5.405 -25.274 24.703 1.00 23.75 O
ATOM 4 OP2 U A 58 5.691 -23.657 26.680 1.00 25.65 O
ATOM 5 O5' U A 58 3.467 -23.937 25.586 1.00 24.01 O
ATOM 6 C5' U A 58 2.565 -24.555 24.654 1.00 23.03 C
ATOM 7 C4' U A 58 1.248 -23.822 24.606 1.00 22.35 C
ATOM 8 O4' U A 58 0.570 -23.905 25.879 1.00 21.01 O
ATOM 9 C3' U A 58 1.253 -22.342 24.281 1.00 23.49 C
ATOM 10 O3' U A 58 1.284 -22.159 22.886 1.00 26.06 O
ATOM 11 C2' U A 58 -0.092 -21.880 24.821 1.00 22.78 C
ATOM 12 O2' U A 58 -1.170 -22.110 23.934 1.00 23.22 O
ATOM 13 C1' U A 58 -0.259 -22.777 26.045 1.00 21.37 C
ATOM 14 N1 U A 58 0.126 -22.088 27.280 1.00 20.58 N
ATOM 15 C2 U A 58 -0.881 -21.528 28.040 1.00 22.03 C
ATOM 16 O2 U A 58 -2.064 -21.645 27.755 1.00 24.06 O
ATOM 17 N3 U A 58 -0.452 -20.831 29.146 1.00 20.98 N
ATOM 18 C4 U A 58 0.853 -20.660 29.561 1.00 20.93 C
ATOM 19 O4 U A 58 1.089 -19.919 30.519 1.00 22.09 O
ATOM 20 C5 U A 58 1.830 -21.308 28.737 1.00 19.87 C
ATOM 21 C6 U A 58 1.441 -21.981 27.653 1.00 19.96 C
ATOM 22 P G A 59 1.652 -20.728 22.263 1.00 28.62 P
ATOM 23 OP1 G A 59 1.533 -20.889 20.792 1.00 30.10 O
ATOM 24 OP2 G A 59 2.939 -20.337 22.832 1.00 26.75 O
ATOM 25 O5' G A 59 0.471 -19.764 22.741 1.00 30.45 O
TER
ATOM 1 O3' U B 11 -11.341 -24.535 23.831 1.00 23.94 O
ATOM 2 P G B 12 -10.649 -25.707 22.979 1.00 24.12 P
ATOM 3 OP1 G B 12 -11.057 -25.633 21.554 1.00 23.13 O
ATOM 4 OP2 G B 12 -10.885 -26.959 23.753 1.00 24.06 O
ATOM 5 O5' G B 12 -9.091 -25.402 23.114 1.00 22.58 O
ATOM 6 C5' G B 12 -8.323 -24.893 22.016 1.00 22.01 C
ATOM 7 C4' G B 12 -7.074 -24.216 22.527 1.00 21.35 C
ATOM 8 O4' G B 12 -7.445 -23.041 23.296 1.00 21.74 O
ATOM 9 C3' G B 12 -6.229 -25.031 23.489 1.00 21.12 C
ATOM 10 O3' G B 12 -5.350 -25.918 22.845 1.00 20.51 O
ATOM 11 C2' G B 12 -5.488 -23.961 24.270 1.00 21.40 C
ATOM 12 O2' G B 12 -4.385 -23.457 23.549 1.00 21.65 O
ATOM 13 C1' G B 12 -6.565 -22.889 24.402 1.00 21.85 C
ATOM 14 N9 G B 12 -7.334 -23.074 25.631 1.00 22.45 N
ATOM 15 C8 G B 12 -8.610 -23.571 25.743 1.00 23.54 C
ATOM 16 N7 G B 12 -9.037 -23.620 26.976 1.00 24.90 N
ATOM 17 C5 G B 12 -7.980 -23.126 27.725 1.00 25.02 C
ATOM 18 C6 G B 12 -7.863 -22.935 29.117 1.00 25.41 C
ATOM 19 O6 G B 12 -8.694 -23.179 29.997 1.00 26.59 O
ATOM 20 N1 G B 12 -6.625 -22.405 29.458 1.00 25.00 N
ATOM 21 C2 G B 12 -5.621 -22.108 28.573 1.00 25.17 C
ATOM 22 N2 G B 12 -4.493 -21.619 29.100 1.00 24.11 N
ATOM 23 N3 G B 12 -5.716 -22.282 27.266 1.00 26.01 N
ATOM 24 C4 G B 12 -6.919 -22.789 26.913 1.00 24.51 C
ATOM 25 P C B 13 -4.978 -27.299 23.557 1.00 20.60 P
ATOM 26 OP1 C B 13 -4.169 -28.107 22.613 1.00 19.82 O
ATOM 27 OP2 C B 13 -6.248 -27.850 24.105 1.00 21.28 O
ATOM 28 O5' C B 13 -4.095 -26.848 24.806 1.00 21.90 O
TER
ATOM 2 P U A 58 4.857 -24.639 25.926 1.00 24.62 P
ATOM 3 OP1 U A 58 5.405 -25.274 24.703 1.00 23.75 O
ATOM 4 OP2 U A 58 5.691 -23.657 26.680 1.00 25.65 O
ATOM 5 O5' U A 58 3.467 -23.937 25.586 1.00 24.01 O
ATOM 6 C5' U A 58 2.565 -24.555 24.654 1.00 23.03 C
ATOM 7 C4' U A 58 1.248 -23.822 24.606 1.00 22.35 C
ATOM 8 O4' U A 58 0.570 -23.905 25.879 1.00 21.01 O
ATOM 9 C3' U A 58 1.253 -22.342 24.281 1.00 23.49 C
ATOM 10 O3' U A 58 1.284 -22.159 22.886 1.00 26.06 O
ATOM 11 C2' U A 58 -0.092 -21.880 24.821 1.00 22.78 C
ATOM 12 O2' U A 58 -1.170 -22.110 23.934 1.00 23.22 O
ATOM 13 C1' U A 58 -0.259 -22.777 26.045 1.00 21.37 C
ATOM 14 N1 U A 58 0.126 -22.088 27.280 1.00 20.58 N
ATOM 15 C2 U A 58 -0.881 -21.528 28.040 1.00 22.03 C
ATOM 16 O2 U A 58 -2.064 -21.645 27.755 1.00 24.06 O
ATOM 17 N3 U A 58 -0.452 -20.831 29.146 1.00 20.98 N
ATOM 18 C4 U A 58 0.853 -20.660 29.561 1.00 20.93 C
ATOM 19 O4 U A 58 1.089 -19.919 30.519 1.00 22.09 O
ATOM 20 C5 U A 58 1.830 -21.308 28.737 1.00 19.87 C
ATOM 21 C6 U A 58 1.441 -21.981 27.653 1.00 19.96 C
ATOM 22 P G A 59 1.652 -20.728 22.263 1.00 28.62 P
ATOM 23 OP1 G A 59 1.533 -20.889 20.792 1.00 30.10 O
ATOM 24 OP2 G A 59 2.939 -20.337 22.832 1.00 26.75 O
ATOM 25 O5' G A 59 0.471 -19.764 22.741 1.00 30.45 O
TER
ATOM 1 O3' U B 11 -11.341 -24.535 23.831 1.00 23.94 O
ATOM 2 P G B 12 -10.649 -25.707 22.979 1.00 24.12 P
ATOM 3 OP1 G B 12 -11.057 -25.633 21.554 1.00 23.13 O
ATOM 4 OP2 G B 12 -10.885 -26.959 23.753 1.00 24.06 O
ATOM 5 O5' G B 12 -9.091 -25.402 23.114 1.00 22.58 O
ATOM 6 C5' G B 12 -8.323 -24.893 22.016 1.00 22.01 C
ATOM 7 C4' G B 12 -7.074 -24.216 22.527 1.00 21.35 C
ATOM 8 O4' G B 12 -7.445 -23.041 23.296 1.00 21.74 O
ATOM 9 C3' G B 12 -6.229 -25.031 23.489 1.00 21.12 C
ATOM 10 O3' G B 12 -5.350 -25.918 22.845 1.00 20.51 O
ATOM 11 C2' G B 12 -5.488 -23.961 24.270 1.00 21.40 C
ATOM 12 O2' G B 12 -4.385 -23.457 23.549 1.00 21.65 O
ATOM 13 C1' G B 12 -6.565 -22.889 24.402 1.00 21.85 C
ATOM 14 N9 G B 12 -7.334 -23.074 25.631 1.00 22.45 N
ATOM 15 C8 G B 12 -8.610 -23.571 25.743 1.00 23.54 C
ATOM 16 N7 G B 12 -9.037 -23.620 26.976 1.00 24.90 N
ATOM 17 C5 G B 12 -7.980 -23.126 27.725 1.00 25.02 C
ATOM 18 C6 G B 12 -7.863 -22.935 29.117 1.00 25.41 C
ATOM 19 O6 G B 12 -8.694 -23.179 29.997 1.00 26.59 O
ATOM 20 N1 G B 12 -6.625 -22.405 29.458 1.00 25.00 N
ATOM 21 C2 G B 12 -5.621 -22.108 28.573 1.00 25.17 C
ATOM 22 N2 G B 12 -4.493 -21.619 29.100 1.00 24.11 N
ATOM 23 N3 G B 12 -5.716 -22.282 27.266 1.00 26.01 N
ATOM 24 C4 G B 12 -6.919 -22.789 26.913 1.00 24.51 C
ATOM 25 P C B 13 -4.978 -27.299 23.557 1.00 20.60 P
ATOM 26 OP1 C B 13 -4.169 -28.107 22.613 1.00 19.82 O
ATOM 27 OP2 C B 13 -6.248 -27.850 24.105 1.00 21.28 O
ATOM 28 O5' C B 13 -4.095 -26.848 24.806 1.00 21.90 O
TER
Atoms:
C4: (0.853,-20.660,29.561)
N3: (-0.452,-20.831,29.146)
OP1: (5.405,-25.274,24.703)
OP2: (5.691,-23.657,26.680)
C2: (-0.881,-21.528,28.040)
C1': (-0.259,-22.777,26.045)
C3': (1.253,-22.342,24.281)
O5': (3.467,-23.937,25.586)
O4': (0.570,-23.905,25.879)
C5': (2.565,-24.555,24.654)
P: (4.857,-24.639,25.926)
C4': (1.248,-23.822,24.606)
C2': (-0.092,-21.880,24.821)
O2': (-1.170,-22.110,23.934)
N1: (0.126,-22.088,27.280)
O4: (1.089,-19.919,30.519)
O2: (-2.064,-21.645,27.755)
C6: (1.441,-21.981,27.653)
C5: (1.830,-21.308,28.737)
O3': (1.284,-22.159,22.886)
N3: (-0.452,-20.831,29.146)
OP1: (5.405,-25.274,24.703)
OP2: (5.691,-23.657,26.680)
C2: (-0.881,-21.528,28.040)
C1': (-0.259,-22.777,26.045)
C3': (1.253,-22.342,24.281)
O5': (3.467,-23.937,25.586)
O4': (0.570,-23.905,25.879)
C5': (2.565,-24.555,24.654)
P: (4.857,-24.639,25.926)
C4': (1.248,-23.822,24.606)
C2': (-0.092,-21.880,24.821)
O2': (-1.170,-22.110,23.934)
N1: (0.126,-22.088,27.280)
O4: (1.089,-19.919,30.519)
O2: (-2.064,-21.645,27.755)
C6: (1.441,-21.981,27.653)
C5: (1.830,-21.308,28.737)
O3': (1.284,-22.159,22.886)
OP1: (-11.057,-25.633,21.554)
OP2: (-10.885,-26.959,23.753)
C3': (-6.229,-25.031,23.489)
C1': (-6.565,-22.889,24.402)
C5': (-8.323,-24.893,22.016)
O6: (-8.694,-23.179,29.997)
O4': (-7.445,-23.041,23.296)
C8: (-8.610,-23.571,25.743)
C2: (-5.621,-22.108,28.573)
C6: (-7.863,-22.935,29.117)
C5: (-7.980,-23.126,27.725)
C4: (-6.919,-22.789,26.913)
P: (-10.649,-25.707,22.979)
C4': (-7.074,-24.216,22.527)
C2': (-5.488,-23.961,24.270)
O2': (-4.385,-23.457,23.549)
N1: (-6.625,-22.405,29.458)
N2: (-4.493,-21.619,29.100)
N3: (-5.716,-22.282,27.266)
N7: (-9.037,-23.620,26.976)
N9: (-7.334,-23.074,25.631)
O5': (-9.091,-25.402,23.114)
O3': (-5.350,-25.918,22.845)
OP2: (-10.885,-26.959,23.753)
C3': (-6.229,-25.031,23.489)
C1': (-6.565,-22.889,24.402)
C5': (-8.323,-24.893,22.016)
O6: (-8.694,-23.179,29.997)
O4': (-7.445,-23.041,23.296)
C8: (-8.610,-23.571,25.743)
C2: (-5.621,-22.108,28.573)
C6: (-7.863,-22.935,29.117)
C5: (-7.980,-23.126,27.725)
C4: (-6.919,-22.789,26.913)
P: (-10.649,-25.707,22.979)
C4': (-7.074,-24.216,22.527)
C2': (-5.488,-23.961,24.270)
O2': (-4.385,-23.457,23.549)
N1: (-6.625,-22.405,29.458)
N2: (-4.493,-21.619,29.100)
N3: (-5.716,-22.282,27.266)
N7: (-9.037,-23.620,26.976)
N9: (-7.334,-23.074,25.631)
O5': (-9.091,-25.402,23.114)
O3': (-5.350,-25.918,22.845)
Image (generated by PyMOL):