Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1K9M:A280:A347
Extra
PDB:
ATOM 1 O3' C A 279 55.873 128.651 -1.436 1.00 79.45 O
ATOM 2 P G A 280 55.308 129.482 -0.186 1.00 78.78 P
ATOM 3 OP1 G A 280 54.327 130.462 -0.720 1.00 79.25 O
ATOM 4 OP2 G A 280 56.462 129.969 0.625 1.00 79.12 O
ATOM 5 O5' G A 280 54.504 128.383 0.645 1.00 78.02 O
ATOM 6 C5' G A 280 53.322 127.761 0.093 1.00 75.83 C
ATOM 7 C4' G A 280 52.918 126.561 0.919 1.00 75.04 C
ATOM 8 O4' G A 280 53.926 125.514 0.818 1.00 73.50 O
ATOM 9 C3' G A 280 52.797 126.825 2.408 1.00 74.90 C
ATOM 10 O3' G A 280 51.560 127.440 2.761 1.00 76.51 O
ATOM 11 C2' G A 280 53.005 125.437 3.002 1.00 73.49 C
ATOM 12 O2' G A 280 51.863 124.602 2.950 1.00 73.17 O
ATOM 13 C1' G A 280 54.097 124.889 2.080 1.00 72.01 C
ATOM 14 N9 G A 280 55.423 125.242 2.580 1.00 69.74 N
ATOM 15 C8 G A 280 56.123 126.401 2.333 1.00 68.83 C
ATOM 16 N7 G A 280 57.267 126.454 2.963 1.00 68.51 N
ATOM 17 C5 G A 280 57.335 125.252 3.657 1.00 68.40 C
ATOM 18 C6 G A 280 58.345 124.741 4.522 1.00 67.71 C
ATOM 19 O6 G A 280 59.413 125.265 4.853 1.00 67.44 O
ATOM 20 N1 G A 280 58.007 123.486 5.016 1.00 66.43 N
ATOM 21 C2 G A 280 56.851 122.808 4.721 1.00 65.86 C
ATOM 22 N2 G A 280 56.703 121.615 5.298 1.00 65.32 N
ATOM 23 N3 G A 280 55.904 123.269 3.919 1.00 66.12 N
ATOM 24 C4 G A 280 56.209 124.488 3.425 1.00 68.37 C
ATOM 25 P A A 281 51.432 128.202 4.170 1.00 77.36 P
ATOM 26 OP1 A A 281 50.190 129.025 4.164 1.00 77.90 O
ATOM 27 OP2 A A 281 52.745 128.860 4.418 1.00 76.37 O
ATOM 28 O5' A A 281 51.225 126.996 5.193 1.00 76.35 O
TER
ATOM 1 O3' G B 346 59.436 123.195 8.973 1.00 78.64 O
ATOM 2 P U B 347 60.257 122.059 8.167 1.00 79.94 P
ATOM 3 OP1 U B 347 61.613 121.862 8.765 1.00 78.90 O
ATOM 4 OP2 U B 347 60.126 122.385 6.722 1.00 80.86 O
ATOM 5 O5' U B 347 59.393 120.739 8.393 1.00 78.75 O
ATOM 6 C5' U B 347 59.511 119.960 9.595 1.00 77.83 C
ATOM 7 C4' U B 347 58.176 119.324 9.941 1.00 77.45 C
ATOM 8 O4' U B 347 57.228 120.359 10.302 1.00 77.09 O
ATOM 9 C3' U B 347 57.470 118.525 8.853 1.00 77.16 C
ATOM 10 O3' U B 347 58.007 117.201 8.791 1.00 78.62 O
ATOM 11 C2' U B 347 56.011 118.565 9.314 1.00 76.25 C
ATOM 12 O2' U B 347 55.677 117.670 10.357 1.00 75.43 O
ATOM 13 C1' U B 347 55.922 119.959 9.933 1.00 76.00 C
ATOM 14 N1 U B 347 55.324 120.998 9.082 1.00 75.71 N
ATOM 15 C2 U B 347 54.008 120.827 8.682 1.00 75.86 C
ATOM 16 O2 U B 347 53.343 119.848 8.978 1.00 75.61 O
ATOM 17 N3 U B 347 53.500 121.851 7.923 1.00 75.50 N
ATOM 18 C4 U B 347 54.152 122.998 7.536 1.00 74.96 C
ATOM 19 O4 U B 347 53.522 123.861 6.933 1.00 74.90 O
ATOM 20 C5 U B 347 55.515 123.096 7.972 1.00 74.65 C
ATOM 21 C6 U B 347 56.039 122.118 8.707 1.00 75.25 C
ATOM 22 P A B 348 58.004 116.385 7.399 1.00 79.32 P
ATOM 23 OP1 A B 348 58.538 115.030 7.737 1.00 77.89 O
ATOM 24 OP2 A B 348 58.650 117.178 6.315 1.00 78.35 O
ATOM 25 O5' A B 348 56.457 116.228 7.044 1.00 79.15 O
TER
ATOM 2 P G A 280 55.308 129.482 -0.186 1.00 78.78 P
ATOM 3 OP1 G A 280 54.327 130.462 -0.720 1.00 79.25 O
ATOM 4 OP2 G A 280 56.462 129.969 0.625 1.00 79.12 O
ATOM 5 O5' G A 280 54.504 128.383 0.645 1.00 78.02 O
ATOM 6 C5' G A 280 53.322 127.761 0.093 1.00 75.83 C
ATOM 7 C4' G A 280 52.918 126.561 0.919 1.00 75.04 C
ATOM 8 O4' G A 280 53.926 125.514 0.818 1.00 73.50 O
ATOM 9 C3' G A 280 52.797 126.825 2.408 1.00 74.90 C
ATOM 10 O3' G A 280 51.560 127.440 2.761 1.00 76.51 O
ATOM 11 C2' G A 280 53.005 125.437 3.002 1.00 73.49 C
ATOM 12 O2' G A 280 51.863 124.602 2.950 1.00 73.17 O
ATOM 13 C1' G A 280 54.097 124.889 2.080 1.00 72.01 C
ATOM 14 N9 G A 280 55.423 125.242 2.580 1.00 69.74 N
ATOM 15 C8 G A 280 56.123 126.401 2.333 1.00 68.83 C
ATOM 16 N7 G A 280 57.267 126.454 2.963 1.00 68.51 N
ATOM 17 C5 G A 280 57.335 125.252 3.657 1.00 68.40 C
ATOM 18 C6 G A 280 58.345 124.741 4.522 1.00 67.71 C
ATOM 19 O6 G A 280 59.413 125.265 4.853 1.00 67.44 O
ATOM 20 N1 G A 280 58.007 123.486 5.016 1.00 66.43 N
ATOM 21 C2 G A 280 56.851 122.808 4.721 1.00 65.86 C
ATOM 22 N2 G A 280 56.703 121.615 5.298 1.00 65.32 N
ATOM 23 N3 G A 280 55.904 123.269 3.919 1.00 66.12 N
ATOM 24 C4 G A 280 56.209 124.488 3.425 1.00 68.37 C
ATOM 25 P A A 281 51.432 128.202 4.170 1.00 77.36 P
ATOM 26 OP1 A A 281 50.190 129.025 4.164 1.00 77.90 O
ATOM 27 OP2 A A 281 52.745 128.860 4.418 1.00 76.37 O
ATOM 28 O5' A A 281 51.225 126.996 5.193 1.00 76.35 O
TER
ATOM 1 O3' G B 346 59.436 123.195 8.973 1.00 78.64 O
ATOM 2 P U B 347 60.257 122.059 8.167 1.00 79.94 P
ATOM 3 OP1 U B 347 61.613 121.862 8.765 1.00 78.90 O
ATOM 4 OP2 U B 347 60.126 122.385 6.722 1.00 80.86 O
ATOM 5 O5' U B 347 59.393 120.739 8.393 1.00 78.75 O
ATOM 6 C5' U B 347 59.511 119.960 9.595 1.00 77.83 C
ATOM 7 C4' U B 347 58.176 119.324 9.941 1.00 77.45 C
ATOM 8 O4' U B 347 57.228 120.359 10.302 1.00 77.09 O
ATOM 9 C3' U B 347 57.470 118.525 8.853 1.00 77.16 C
ATOM 10 O3' U B 347 58.007 117.201 8.791 1.00 78.62 O
ATOM 11 C2' U B 347 56.011 118.565 9.314 1.00 76.25 C
ATOM 12 O2' U B 347 55.677 117.670 10.357 1.00 75.43 O
ATOM 13 C1' U B 347 55.922 119.959 9.933 1.00 76.00 C
ATOM 14 N1 U B 347 55.324 120.998 9.082 1.00 75.71 N
ATOM 15 C2 U B 347 54.008 120.827 8.682 1.00 75.86 C
ATOM 16 O2 U B 347 53.343 119.848 8.978 1.00 75.61 O
ATOM 17 N3 U B 347 53.500 121.851 7.923 1.00 75.50 N
ATOM 18 C4 U B 347 54.152 122.998 7.536 1.00 74.96 C
ATOM 19 O4 U B 347 53.522 123.861 6.933 1.00 74.90 O
ATOM 20 C5 U B 347 55.515 123.096 7.972 1.00 74.65 C
ATOM 21 C6 U B 347 56.039 122.118 8.707 1.00 75.25 C
ATOM 22 P A B 348 58.004 116.385 7.399 1.00 79.32 P
ATOM 23 OP1 A B 348 58.538 115.030 7.737 1.00 77.89 O
ATOM 24 OP2 A B 348 58.650 117.178 6.315 1.00 78.35 O
ATOM 25 O5' A B 348 56.457 116.228 7.044 1.00 79.15 O
TER
Atoms:
OP1: (54.327,130.462,-0.720)
OP2: (56.462,129.969,0.625)
C3': (52.797,126.825,2.408)
C1': (54.097,124.889,2.080)
C5': (53.322,127.761,0.093)
O6: (59.413,125.265,4.853)
O4': (53.926,125.514,0.818)
C8: (56.123,126.401,2.333)
C2: (56.851,122.808,4.721)
C6: (58.345,124.741,4.522)
C5: (57.335,125.252,3.657)
C4: (56.209,124.488,3.425)
P: (55.308,129.482,-0.186)
C4': (52.918,126.561,0.919)
C2': (53.005,125.437,3.002)
O2': (51.863,124.602,2.950)
N1: (58.007,123.486,5.016)
N2: (56.703,121.615,5.298)
N3: (55.904,123.269,3.919)
N7: (57.267,126.454,2.963)
N9: (55.423,125.242,2.580)
O5': (54.504,128.383,0.645)
O3': (51.560,127.440,2.761)
OP2: (56.462,129.969,0.625)
C3': (52.797,126.825,2.408)
C1': (54.097,124.889,2.080)
C5': (53.322,127.761,0.093)
O6: (59.413,125.265,4.853)
O4': (53.926,125.514,0.818)
C8: (56.123,126.401,2.333)
C2: (56.851,122.808,4.721)
C6: (58.345,124.741,4.522)
C5: (57.335,125.252,3.657)
C4: (56.209,124.488,3.425)
P: (55.308,129.482,-0.186)
C4': (52.918,126.561,0.919)
C2': (53.005,125.437,3.002)
O2': (51.863,124.602,2.950)
N1: (58.007,123.486,5.016)
N2: (56.703,121.615,5.298)
N3: (55.904,123.269,3.919)
N7: (57.267,126.454,2.963)
N9: (55.423,125.242,2.580)
O5': (54.504,128.383,0.645)
O3': (51.560,127.440,2.761)
C4: (54.152,122.998,7.536)
N3: (53.500,121.851,7.923)
OP1: (61.613,121.862,8.765)
OP2: (60.126,122.385,6.722)
C2: (54.008,120.827,8.682)
C1': (55.922,119.959,9.933)
C3': (57.470,118.525,8.853)
O5': (59.393,120.739,8.393)
O4': (57.228,120.359,10.302)
C5': (59.511,119.960,9.595)
P: (60.257,122.059,8.167)
C4': (58.176,119.324,9.941)
C2': (56.011,118.565,9.314)
O2': (55.677,117.670,10.357)
N1: (55.324,120.998,9.082)
O4: (53.522,123.861,6.933)
O2: (53.343,119.848,8.978)
C6: (56.039,122.118,8.707)
C5: (55.515,123.096,7.972)
O3': (58.007,117.201,8.791)
N3: (53.500,121.851,7.923)
OP1: (61.613,121.862,8.765)
OP2: (60.126,122.385,6.722)
C2: (54.008,120.827,8.682)
C1': (55.922,119.959,9.933)
C3': (57.470,118.525,8.853)
O5': (59.393,120.739,8.393)
O4': (57.228,120.359,10.302)
C5': (59.511,119.960,9.595)
P: (60.257,122.059,8.167)
C4': (58.176,119.324,9.941)
C2': (56.011,118.565,9.314)
O2': (55.677,117.670,10.357)
N1: (55.324,120.998,9.082)
O4: (53.522,123.861,6.933)
O2: (53.343,119.848,8.978)
C6: (56.039,122.118,8.707)
C5: (55.515,123.096,7.972)
O3': (58.007,117.201,8.791)
Image (generated by PyMOL):