Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A1927:A1222
Extra
PDB:
ATOM 1 O3' U A1926 45.669 -81.659 -7.984 1.00 41.19 O
ATOM 2 P G A1927 46.907 -82.639 -8.342 1.00 42.04 P
ATOM 3 OP1 G A1927 46.814 -83.081 -9.762 1.00 30.15 O
ATOM 4 OP2 G A1927 47.013 -83.648 -7.256 1.00 39.23 O
ATOM 5 O5' G A1927 48.186 -81.716 -8.202 1.00 37.02 O
ATOM 6 C5' G A1927 48.213 -80.462 -8.856 1.00 42.13 C
ATOM 7 C4' G A1927 49.220 -79.564 -8.206 1.00 39.57 C
ATOM 8 O4' G A1927 48.843 -79.322 -6.826 1.00 39.68 O
ATOM 9 C3' G A1927 50.617 -80.133 -8.129 1.00 42.34 C
ATOM 10 O3' G A1927 51.257 -79.976 -9.387 1.00 39.02 O
ATOM 11 C2' G A1927 51.208 -79.322 -6.980 1.00 41.96 C
ATOM 12 O2' G A1927 51.540 -78.018 -7.392 1.00 37.33 O
ATOM 13 C1' G A1927 50.009 -79.217 -6.035 1.00 42.71 C
ATOM 14 N9 G A1927 50.011 -80.293 -5.043 1.00 41.45 N
ATOM 15 C8 G A1927 49.454 -81.555 -5.145 1.00 44.20 C
ATOM 16 N7 G A1927 49.686 -82.299 -4.097 1.00 44.45 N
ATOM 17 C5 G A1927 50.430 -81.478 -3.258 1.00 44.65 C
ATOM 18 C6 G A1927 50.994 -81.735 -2.002 1.00 48.86 C
ATOM 19 O6 G A1927 50.994 -82.779 -1.374 1.00 54.45 O
ATOM 20 N1 G A1927 51.633 -80.619 -1.482 1.00 44.13 N
ATOM 21 C2 G A1927 51.742 -79.417 -2.115 1.00 41.19 C
ATOM 22 N2 G A1927 52.372 -78.453 -1.453 1.00 35.33 N
ATOM 23 N3 G A1927 51.261 -79.173 -3.310 1.00 44.12 N
ATOM 24 C4 G A1927 50.615 -80.237 -3.817 1.00 43.72 C
ATOM 25 P A A1928 52.752 -80.483 -9.594 1.00 37.94 P
ATOM 26 OP1 A A1928 52.948 -80.632 -11.055 1.00 32.16 O
ATOM 27 OP2 A A1928 52.988 -81.646 -8.709 1.00 37.53 O
ATOM 28 O5' A A1928 53.570 -79.241 -9.022 1.00 32.22 O
TER
ATOM 1 O3' G B1221 54.108 -82.504 0.531 1.00 39.90 O
ATOM 2 P U B1222 53.460 -81.546 1.658 1.00 32.06 P
ATOM 3 OP1 U B1222 53.452 -82.186 3.015 1.00 34.44 O
ATOM 4 OP2 U B1222 52.201 -80.986 1.104 1.00 33.04 O
ATOM 5 O5' U B1222 54.515 -80.374 1.822 1.00 37.74 O
ATOM 6 C5' U B1222 55.794 -80.638 2.385 1.00 35.94 C
ATOM 7 C4' U B1222 56.824 -79.712 1.800 1.00 32.14 C
ATOM 8 O4' U B1222 57.237 -80.183 0.498 1.00 30.84 O
ATOM 9 C3' U B1222 56.344 -78.290 1.582 1.00 40.12 C
ATOM 10 O3' U B1222 56.498 -77.566 2.793 1.00 42.31 O
ATOM 11 C2' U B1222 57.253 -77.796 0.461 1.00 39.38 C
ATOM 12 O2' U B1222 58.500 -77.333 0.948 1.00 34.36 O
ATOM 13 C1' U B1222 57.469 -79.079 -0.357 1.00 31.90 C
ATOM 14 N1 U B1222 56.630 -79.266 -1.555 1.00 30.43 N
ATOM 15 C2 U B1222 56.637 -78.307 -2.566 1.00 36.54 C
ATOM 16 O2 U B1222 57.263 -77.256 -2.496 1.00 39.00 O
ATOM 17 N3 U B1222 55.873 -78.625 -3.663 1.00 35.40 N
ATOM 18 C4 U B1222 55.105 -79.756 -3.846 1.00 39.03 C
ATOM 19 O4 U B1222 54.500 -79.924 -4.911 1.00 41.25 O
ATOM 20 C5 U B1222 55.122 -80.667 -2.752 1.00 42.36 C
ATOM 21 C6 U B1222 55.861 -80.399 -1.676 1.00 38.65 C
ATOM 22 P A B1223 55.422 -76.450 3.196 1.00 38.10 P
ATOM 23 OP1 A B1223 55.889 -75.946 4.519 1.00 39.05 O
ATOM 24 OP2 A B1223 54.055 -77.013 3.057 1.00 35.29 O
ATOM 25 O5' A B1223 55.602 -75.298 2.104 1.00 34.16 O
TER
ATOM 2 P G A1927 46.907 -82.639 -8.342 1.00 42.04 P
ATOM 3 OP1 G A1927 46.814 -83.081 -9.762 1.00 30.15 O
ATOM 4 OP2 G A1927 47.013 -83.648 -7.256 1.00 39.23 O
ATOM 5 O5' G A1927 48.186 -81.716 -8.202 1.00 37.02 O
ATOM 6 C5' G A1927 48.213 -80.462 -8.856 1.00 42.13 C
ATOM 7 C4' G A1927 49.220 -79.564 -8.206 1.00 39.57 C
ATOM 8 O4' G A1927 48.843 -79.322 -6.826 1.00 39.68 O
ATOM 9 C3' G A1927 50.617 -80.133 -8.129 1.00 42.34 C
ATOM 10 O3' G A1927 51.257 -79.976 -9.387 1.00 39.02 O
ATOM 11 C2' G A1927 51.208 -79.322 -6.980 1.00 41.96 C
ATOM 12 O2' G A1927 51.540 -78.018 -7.392 1.00 37.33 O
ATOM 13 C1' G A1927 50.009 -79.217 -6.035 1.00 42.71 C
ATOM 14 N9 G A1927 50.011 -80.293 -5.043 1.00 41.45 N
ATOM 15 C8 G A1927 49.454 -81.555 -5.145 1.00 44.20 C
ATOM 16 N7 G A1927 49.686 -82.299 -4.097 1.00 44.45 N
ATOM 17 C5 G A1927 50.430 -81.478 -3.258 1.00 44.65 C
ATOM 18 C6 G A1927 50.994 -81.735 -2.002 1.00 48.86 C
ATOM 19 O6 G A1927 50.994 -82.779 -1.374 1.00 54.45 O
ATOM 20 N1 G A1927 51.633 -80.619 -1.482 1.00 44.13 N
ATOM 21 C2 G A1927 51.742 -79.417 -2.115 1.00 41.19 C
ATOM 22 N2 G A1927 52.372 -78.453 -1.453 1.00 35.33 N
ATOM 23 N3 G A1927 51.261 -79.173 -3.310 1.00 44.12 N
ATOM 24 C4 G A1927 50.615 -80.237 -3.817 1.00 43.72 C
ATOM 25 P A A1928 52.752 -80.483 -9.594 1.00 37.94 P
ATOM 26 OP1 A A1928 52.948 -80.632 -11.055 1.00 32.16 O
ATOM 27 OP2 A A1928 52.988 -81.646 -8.709 1.00 37.53 O
ATOM 28 O5' A A1928 53.570 -79.241 -9.022 1.00 32.22 O
TER
ATOM 1 O3' G B1221 54.108 -82.504 0.531 1.00 39.90 O
ATOM 2 P U B1222 53.460 -81.546 1.658 1.00 32.06 P
ATOM 3 OP1 U B1222 53.452 -82.186 3.015 1.00 34.44 O
ATOM 4 OP2 U B1222 52.201 -80.986 1.104 1.00 33.04 O
ATOM 5 O5' U B1222 54.515 -80.374 1.822 1.00 37.74 O
ATOM 6 C5' U B1222 55.794 -80.638 2.385 1.00 35.94 C
ATOM 7 C4' U B1222 56.824 -79.712 1.800 1.00 32.14 C
ATOM 8 O4' U B1222 57.237 -80.183 0.498 1.00 30.84 O
ATOM 9 C3' U B1222 56.344 -78.290 1.582 1.00 40.12 C
ATOM 10 O3' U B1222 56.498 -77.566 2.793 1.00 42.31 O
ATOM 11 C2' U B1222 57.253 -77.796 0.461 1.00 39.38 C
ATOM 12 O2' U B1222 58.500 -77.333 0.948 1.00 34.36 O
ATOM 13 C1' U B1222 57.469 -79.079 -0.357 1.00 31.90 C
ATOM 14 N1 U B1222 56.630 -79.266 -1.555 1.00 30.43 N
ATOM 15 C2 U B1222 56.637 -78.307 -2.566 1.00 36.54 C
ATOM 16 O2 U B1222 57.263 -77.256 -2.496 1.00 39.00 O
ATOM 17 N3 U B1222 55.873 -78.625 -3.663 1.00 35.40 N
ATOM 18 C4 U B1222 55.105 -79.756 -3.846 1.00 39.03 C
ATOM 19 O4 U B1222 54.500 -79.924 -4.911 1.00 41.25 O
ATOM 20 C5 U B1222 55.122 -80.667 -2.752 1.00 42.36 C
ATOM 21 C6 U B1222 55.861 -80.399 -1.676 1.00 38.65 C
ATOM 22 P A B1223 55.422 -76.450 3.196 1.00 38.10 P
ATOM 23 OP1 A B1223 55.889 -75.946 4.519 1.00 39.05 O
ATOM 24 OP2 A B1223 54.055 -77.013 3.057 1.00 35.29 O
ATOM 25 O5' A B1223 55.602 -75.298 2.104 1.00 34.16 O
TER
Atoms:
OP1: (46.814,-83.081,-9.762)
OP2: (47.013,-83.648,-7.256)
C3': (50.617,-80.133,-8.129)
C1': (50.009,-79.217,-6.035)
C5': (48.213,-80.462,-8.856)
O6: (50.994,-82.779,-1.374)
O4': (48.843,-79.322,-6.826)
C8: (49.454,-81.555,-5.145)
C2: (51.742,-79.417,-2.115)
C6: (50.994,-81.735,-2.002)
C5: (50.430,-81.478,-3.258)
C4: (50.615,-80.237,-3.817)
P: (46.907,-82.639,-8.342)
C4': (49.220,-79.564,-8.206)
C2': (51.208,-79.322,-6.980)
O2': (51.540,-78.018,-7.392)
N1: (51.633,-80.619,-1.482)
N2: (52.372,-78.453,-1.453)
N3: (51.261,-79.173,-3.310)
N7: (49.686,-82.299,-4.097)
N9: (50.011,-80.293,-5.043)
O5': (48.186,-81.716,-8.202)
O3': (51.257,-79.976,-9.387)
OP2: (47.013,-83.648,-7.256)
C3': (50.617,-80.133,-8.129)
C1': (50.009,-79.217,-6.035)
C5': (48.213,-80.462,-8.856)
O6: (50.994,-82.779,-1.374)
O4': (48.843,-79.322,-6.826)
C8: (49.454,-81.555,-5.145)
C2: (51.742,-79.417,-2.115)
C6: (50.994,-81.735,-2.002)
C5: (50.430,-81.478,-3.258)
C4: (50.615,-80.237,-3.817)
P: (46.907,-82.639,-8.342)
C4': (49.220,-79.564,-8.206)
C2': (51.208,-79.322,-6.980)
O2': (51.540,-78.018,-7.392)
N1: (51.633,-80.619,-1.482)
N2: (52.372,-78.453,-1.453)
N3: (51.261,-79.173,-3.310)
N7: (49.686,-82.299,-4.097)
N9: (50.011,-80.293,-5.043)
O5': (48.186,-81.716,-8.202)
O3': (51.257,-79.976,-9.387)
C4: (55.105,-79.756,-3.846)
N3: (55.873,-78.625,-3.663)
OP1: (53.452,-82.186,3.015)
OP2: (52.201,-80.986,1.104)
C2: (56.637,-78.307,-2.566)
C1': (57.469,-79.079,-0.357)
C3': (56.344,-78.290,1.582)
O5': (54.515,-80.374,1.822)
O4': (57.237,-80.183,0.498)
C5': (55.794,-80.638,2.385)
P: (53.460,-81.546,1.658)
C4': (56.824,-79.712,1.800)
C2': (57.253,-77.796,0.461)
O2': (58.500,-77.333,0.948)
N1: (56.630,-79.266,-1.555)
O4: (54.500,-79.924,-4.911)
O2: (57.263,-77.256,-2.496)
C6: (55.861,-80.399,-1.676)
C5: (55.122,-80.667,-2.752)
O3': (56.498,-77.566,2.793)
N3: (55.873,-78.625,-3.663)
OP1: (53.452,-82.186,3.015)
OP2: (52.201,-80.986,1.104)
C2: (56.637,-78.307,-2.566)
C1': (57.469,-79.079,-0.357)
C3': (56.344,-78.290,1.582)
O5': (54.515,-80.374,1.822)
O4': (57.237,-80.183,0.498)
C5': (55.794,-80.638,2.385)
P: (53.460,-81.546,1.658)
C4': (56.824,-79.712,1.800)
C2': (57.253,-77.796,0.461)
O2': (58.500,-77.333,0.948)
N1: (56.630,-79.266,-1.555)
O4: (54.500,-79.924,-4.911)
O2: (57.263,-77.256,-2.496)
C6: (55.861,-80.399,-1.676)
C5: (55.122,-80.667,-2.752)
O3': (56.498,-77.566,2.793)
Image (generated by PyMOL):