Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ7:0556:0577
Extra
PDB:
ATOM 1 O3' U A 555 3.681 92.816 107.410 1.00 57.19 O
ATOM 2 P G A 556 3.173 92.125 108.774 1.00 57.22 P
ATOM 3 OP1 G A 556 4.182 92.443 109.821 1.00 56.89 O
ATOM 4 OP2 G A 556 2.845 90.707 108.488 1.00 54.66 O
ATOM 5 O5' G A 556 1.841 92.925 109.124 1.00 55.27 O
ATOM 6 C5' G A 556 1.905 94.305 109.533 1.00 55.63 C
ATOM 7 C4' G A 556 0.516 94.847 109.772 1.00 57.37 C
ATOM 8 O4' G A 556 -0.193 95.002 108.510 1.00 56.30 O
ATOM 9 C3' G A 556 -0.404 93.953 110.587 1.00 57.74 C
ATOM 10 O3' G A 556 -0.145 94.013 111.981 1.00 58.16 O
ATOM 11 C2' G A 556 -1.777 94.481 110.201 1.00 55.38 C
ATOM 12 O2' G A 556 -2.090 95.701 110.845 1.00 55.10 O
ATOM 13 C1' G A 556 -1.573 94.732 108.706 1.00 53.48 C
ATOM 14 N9 G A 556 -1.934 93.570 107.900 1.00 51.05 N
ATOM 15 C8 G A 556 -1.118 92.537 107.503 1.00 48.95 C
ATOM 16 N7 G A 556 -1.739 91.645 106.780 1.00 47.07 N
ATOM 17 C5 G A 556 -3.043 92.115 106.697 1.00 48.91 C
ATOM 18 C6 G A 556 -4.177 91.574 106.040 1.00 49.68 C
ATOM 19 O6 G A 556 -4.262 90.538 105.364 1.00 51.00 O
ATOM 20 N1 G A 556 -5.300 92.370 106.221 1.00 49.18 N
ATOM 21 C2 G A 556 -5.335 93.537 106.935 1.00 50.88 C
ATOM 22 N2 G A 556 -6.520 94.162 106.990 1.00 52.42 N
ATOM 23 N3 G A 556 -4.288 94.055 107.549 1.00 51.81 N
ATOM 24 C4 G A 556 -3.180 93.297 107.387 1.00 50.87 C
ATOM 25 P A A 557 -0.669 92.828 112.930 1.00 59.13 P
ATOM 26 OP1 A A 557 0.054 92.967 114.220 1.00 59.10 O
ATOM 27 OP2 A A 557 -0.602 91.539 112.189 1.00 56.81 O
ATOM 28 O5' A A 557 -2.204 93.205 113.131 1.00 58.66 O
TER
ATOM 1 O3' G B 576 -8.627 89.763 106.406 1.00 73.98 O
ATOM 2 P U B 577 -8.921 90.627 105.083 1.00 75.27 P
ATOM 3 OP1 U B 577 -9.460 89.721 104.029 1.00 73.33 O
ATOM 4 OP2 U B 577 -7.715 91.443 104.795 1.00 75.29 O
ATOM 5 O5' U B 577 -10.054 91.639 105.577 1.00 74.42 O
ATOM 6 C5' U B 577 -11.304 91.158 106.135 1.00 72.68 C
ATOM 7 C4' U B 577 -11.693 91.975 107.353 1.00 71.35 C
ATOM 8 O4' U B 577 -10.971 91.524 108.526 1.00 70.15 O
ATOM 9 C3' U B 577 -11.385 93.461 107.276 1.00 71.53 C
ATOM 10 O3' U B 577 -12.367 94.164 106.522 1.00 71.95 O
ATOM 11 C2' U B 577 -11.349 93.877 108.745 1.00 70.51 C
ATOM 12 O2' U B 577 -12.614 94.163 109.295 1.00 69.87 O
ATOM 13 C1' U B 577 -10.783 92.619 109.416 1.00 69.93 C
ATOM 14 N1 U B 577 -9.365 92.688 109.821 1.00 69.09 N
ATOM 15 C2 U B 577 -9.008 93.603 110.812 1.00 69.16 C
ATOM 16 O2 U B 577 -9.807 94.351 111.354 1.00 68.31 O
ATOM 17 N3 U B 577 -7.676 93.608 111.144 1.00 68.85 N
ATOM 18 C4 U B 577 -6.681 92.815 110.609 1.00 69.25 C
ATOM 19 O4 U B 577 -5.522 92.946 111.007 1.00 69.42 O
ATOM 20 C5 U B 577 -7.124 91.900 109.601 1.00 68.58 C
ATOM 21 C6 U B 577 -8.414 91.870 109.248 1.00 68.66 C
ATOM 22 P A B 578 -11.951 95.480 105.701 1.00 73.56 P
ATOM 23 OP1 A B 578 -13.144 95.966 104.966 1.00 74.71 O
ATOM 24 OP2 A B 578 -10.706 95.176 104.951 1.00 75.95 O
ATOM 25 O5' A B 578 -11.625 96.546 106.834 1.00 70.47 O
TER
ATOM 2 P G A 556 3.173 92.125 108.774 1.00 57.22 P
ATOM 3 OP1 G A 556 4.182 92.443 109.821 1.00 56.89 O
ATOM 4 OP2 G A 556 2.845 90.707 108.488 1.00 54.66 O
ATOM 5 O5' G A 556 1.841 92.925 109.124 1.00 55.27 O
ATOM 6 C5' G A 556 1.905 94.305 109.533 1.00 55.63 C
ATOM 7 C4' G A 556 0.516 94.847 109.772 1.00 57.37 C
ATOM 8 O4' G A 556 -0.193 95.002 108.510 1.00 56.30 O
ATOM 9 C3' G A 556 -0.404 93.953 110.587 1.00 57.74 C
ATOM 10 O3' G A 556 -0.145 94.013 111.981 1.00 58.16 O
ATOM 11 C2' G A 556 -1.777 94.481 110.201 1.00 55.38 C
ATOM 12 O2' G A 556 -2.090 95.701 110.845 1.00 55.10 O
ATOM 13 C1' G A 556 -1.573 94.732 108.706 1.00 53.48 C
ATOM 14 N9 G A 556 -1.934 93.570 107.900 1.00 51.05 N
ATOM 15 C8 G A 556 -1.118 92.537 107.503 1.00 48.95 C
ATOM 16 N7 G A 556 -1.739 91.645 106.780 1.00 47.07 N
ATOM 17 C5 G A 556 -3.043 92.115 106.697 1.00 48.91 C
ATOM 18 C6 G A 556 -4.177 91.574 106.040 1.00 49.68 C
ATOM 19 O6 G A 556 -4.262 90.538 105.364 1.00 51.00 O
ATOM 20 N1 G A 556 -5.300 92.370 106.221 1.00 49.18 N
ATOM 21 C2 G A 556 -5.335 93.537 106.935 1.00 50.88 C
ATOM 22 N2 G A 556 -6.520 94.162 106.990 1.00 52.42 N
ATOM 23 N3 G A 556 -4.288 94.055 107.549 1.00 51.81 N
ATOM 24 C4 G A 556 -3.180 93.297 107.387 1.00 50.87 C
ATOM 25 P A A 557 -0.669 92.828 112.930 1.00 59.13 P
ATOM 26 OP1 A A 557 0.054 92.967 114.220 1.00 59.10 O
ATOM 27 OP2 A A 557 -0.602 91.539 112.189 1.00 56.81 O
ATOM 28 O5' A A 557 -2.204 93.205 113.131 1.00 58.66 O
TER
ATOM 1 O3' G B 576 -8.627 89.763 106.406 1.00 73.98 O
ATOM 2 P U B 577 -8.921 90.627 105.083 1.00 75.27 P
ATOM 3 OP1 U B 577 -9.460 89.721 104.029 1.00 73.33 O
ATOM 4 OP2 U B 577 -7.715 91.443 104.795 1.00 75.29 O
ATOM 5 O5' U B 577 -10.054 91.639 105.577 1.00 74.42 O
ATOM 6 C5' U B 577 -11.304 91.158 106.135 1.00 72.68 C
ATOM 7 C4' U B 577 -11.693 91.975 107.353 1.00 71.35 C
ATOM 8 O4' U B 577 -10.971 91.524 108.526 1.00 70.15 O
ATOM 9 C3' U B 577 -11.385 93.461 107.276 1.00 71.53 C
ATOM 10 O3' U B 577 -12.367 94.164 106.522 1.00 71.95 O
ATOM 11 C2' U B 577 -11.349 93.877 108.745 1.00 70.51 C
ATOM 12 O2' U B 577 -12.614 94.163 109.295 1.00 69.87 O
ATOM 13 C1' U B 577 -10.783 92.619 109.416 1.00 69.93 C
ATOM 14 N1 U B 577 -9.365 92.688 109.821 1.00 69.09 N
ATOM 15 C2 U B 577 -9.008 93.603 110.812 1.00 69.16 C
ATOM 16 O2 U B 577 -9.807 94.351 111.354 1.00 68.31 O
ATOM 17 N3 U B 577 -7.676 93.608 111.144 1.00 68.85 N
ATOM 18 C4 U B 577 -6.681 92.815 110.609 1.00 69.25 C
ATOM 19 O4 U B 577 -5.522 92.946 111.007 1.00 69.42 O
ATOM 20 C5 U B 577 -7.124 91.900 109.601 1.00 68.58 C
ATOM 21 C6 U B 577 -8.414 91.870 109.248 1.00 68.66 C
ATOM 22 P A B 578 -11.951 95.480 105.701 1.00 73.56 P
ATOM 23 OP1 A B 578 -13.144 95.966 104.966 1.00 74.71 O
ATOM 24 OP2 A B 578 -10.706 95.176 104.951 1.00 75.95 O
ATOM 25 O5' A B 578 -11.625 96.546 106.834 1.00 70.47 O
TER
Atoms:
OP1: (4.182,92.443,109.821)
OP2: (2.845,90.707,108.488)
C3': (-0.404,93.953,110.587)
C1': (-1.573,94.732,108.706)
C5': (1.905,94.305,109.533)
O6: (-4.262,90.538,105.364)
O4': (-0.193,95.002,108.510)
C8: (-1.118,92.537,107.503)
C2: (-5.335,93.537,106.935)
C6: (-4.177,91.574,106.040)
C5: (-3.043,92.115,106.697)
C4: (-3.180,93.297,107.387)
P: (3.173,92.125,108.774)
C4': (0.516,94.847,109.772)
C2': (-1.777,94.481,110.201)
O2': (-2.090,95.701,110.845)
N1: (-5.300,92.370,106.221)
N2: (-6.520,94.162,106.990)
N3: (-4.288,94.055,107.549)
N7: (-1.739,91.645,106.780)
N9: (-1.934,93.570,107.900)
O5': (1.841,92.925,109.124)
O3': (-0.145,94.013,111.981)
OP2: (2.845,90.707,108.488)
C3': (-0.404,93.953,110.587)
C1': (-1.573,94.732,108.706)
C5': (1.905,94.305,109.533)
O6: (-4.262,90.538,105.364)
O4': (-0.193,95.002,108.510)
C8: (-1.118,92.537,107.503)
C2: (-5.335,93.537,106.935)
C6: (-4.177,91.574,106.040)
C5: (-3.043,92.115,106.697)
C4: (-3.180,93.297,107.387)
P: (3.173,92.125,108.774)
C4': (0.516,94.847,109.772)
C2': (-1.777,94.481,110.201)
O2': (-2.090,95.701,110.845)
N1: (-5.300,92.370,106.221)
N2: (-6.520,94.162,106.990)
N3: (-4.288,94.055,107.549)
N7: (-1.739,91.645,106.780)
N9: (-1.934,93.570,107.900)
O5': (1.841,92.925,109.124)
O3': (-0.145,94.013,111.981)
C4: (-6.681,92.815,110.609)
N3: (-7.676,93.608,111.144)
OP1: (-9.460,89.721,104.029)
OP2: (-7.715,91.443,104.795)
C2: (-9.008,93.603,110.812)
C1': (-10.783,92.619,109.416)
C3': (-11.385,93.461,107.276)
O5': (-10.054,91.639,105.577)
O4': (-10.971,91.524,108.526)
C5': (-11.304,91.158,106.135)
P: (-8.921,90.627,105.083)
C4': (-11.693,91.975,107.353)
C2': (-11.349,93.877,108.745)
O2': (-12.614,94.163,109.295)
N1: (-9.365,92.688,109.821)
O4: (-5.522,92.946,111.007)
O2: (-9.807,94.351,111.354)
C6: (-8.414,91.870,109.248)
C5: (-7.124,91.900,109.601)
O3': (-12.367,94.164,106.522)
N3: (-7.676,93.608,111.144)
OP1: (-9.460,89.721,104.029)
OP2: (-7.715,91.443,104.795)
C2: (-9.008,93.603,110.812)
C1': (-10.783,92.619,109.416)
C3': (-11.385,93.461,107.276)
O5': (-10.054,91.639,105.577)
O4': (-10.971,91.524,108.526)
C5': (-11.304,91.158,106.135)
P: (-8.921,90.627,105.083)
C4': (-11.693,91.975,107.353)
C2': (-11.349,93.877,108.745)
O2': (-12.614,94.163,109.295)
N1: (-9.365,92.688,109.821)
O4: (-5.522,92.946,111.007)
O2: (-9.807,94.351,111.354)
C6: (-8.414,91.870,109.248)
C5: (-7.124,91.900,109.601)
O3': (-12.367,94.164,106.522)
Image (generated by PyMOL):